Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00015 ATGGACGGGAAGGAACCTGTCAAAGACTTGGCAGCTTTTCTCATTCGCTGCCATTCCGACCAGCTCTCCTCCATTTCTCTCTCTCCCGACCCCAACCTCCATTATCCTCTCGTCGTTGAAAAAAGGTCAGCAGTGATGACCAAAATATGCTATTTTGGAAAATCTGCCCACAACAACTGTCAGGACCAGATCCCGACGACCAGATTGGGCCTCGACAGCTCTATCGATAGGATTCCTGAGAGGATATTTAATGGCTTGAGTGACATAGCTTGGTTCAATGGGGTTAGGAAGAAGGTGTTTGGTGGTGAGATGGAATTATTTGTGGCCAAAGATATTGTTGTGGGATCTGAAGATCATAAGACTTTTCCTAGCATTGGTTCCATAAGAGTGAGGCATCGTGGAATTCTTCTCACACTCAAAGGGACGGTAATCAGGTCTGGAGCAATCAAGCTGTATGAAGGGGAGAGATTCCAAATTTATCCAGAACTAGAGAGTCGAAACTCCATACAATTACCATCTTTTTGCCCCTCTCAAAAGACTAGAAGTTGTGAAGGTAAAAGTTTTGAGTGCTTGGAGGGGTCTATAATACGTCATGATTACCAAGAGATCAAAATTCAGGAGAGTACACAGATACTGGGTGTTGGGTCCATACCTCGTACAATCCCTGTCATTTTTAAGGATGACCTTGTTGACATTGTGAAAGCTGGAGATGATGTAATAGTTACTGGGGTCTTAAGTGCAAAGTGGTCTCCAGAGCTTAAAGATGTACGGTGTGATCTTGATCCCATGTTAATTGCTAATTATGTGAGGAGAACAAATGAATTGAAATCAGACATAGACATTCCTGAAGACGTTATAGTGAGATTCAAGCAGTTTTGGTCAAATTTCAATCATACTCCCTTGAAAGGGAGAAATGCCATTTTAAGAGGTATATGCCCCCAAGTTTATGGACTTTTCACCGTAAAACTTGCAGTTATGTTGACTCTTATTGGTGGGGTGCAACAAATTGATGCATCTGGGACTAAAGTTCGAGGGGAATCTCATTTGCTTTTGGTTGGGGATCCAGGTACTGGAAAGTCACAGTTCTTGAAATTTGCAGCAAAATTAAGCAACCGATCTGTTATTACAACAGGATTAGGTAGCACTAGTGCTGGATTGACTGTTGCTGCTGTTAAGGATGGGGGTGAATGGATGTTGGAAGCTGGGGCACTTGTTTTGGCAGATGGAGGACTTTGTTGTATTGACGAAGTGGACAGCATGAGAGAACATGACAGGGCTACTATACATGAAGCAATGGAGCAGCAGACCATAAGCGTTGCTAAGGCTGGTCTTGTAACAACTCTCAGAACTAGGACGATAGTATTTGGTGCAACAAATCCTAAAGGGCACTATGATCCTGATCAACGTATCATTTCTTTATCTGTCAATACAACCCTCTCTGGTCCCTTGCTGAGCAGATTTGATATAGTCCTTGTCCTCCAAGACACTAAGAATGCTGAATGGGATGCAGTTGTTTCTTCGCACATTCTGTCTGAGGGTGAAGTAGAACAAGGGAAGTTTGAAGATATATCAAAATCTTGGTCTTTGCCTATGATTCGCAGGTATATTCACTTTGTGAAAGGGTACTTCAGACCTGTGCTGACAAAGGAAGCAGAAAATATCATCTCAAACTATTATCAGCTCCAAAGAAGATCGGCAACACACAATGCAGCTCACGCCAGACTCATGTTTAGAAATGAAGTTACTCGATTAGATGCCATTACGGCTATCTTATGTGTTGAATCATCCATGACTGCCTCAGCTATTGTGGACAGTGTCGGGAATGCCCTCCACTCCAATTTTACAGAGAATCCAGATGAGGAATGTATCCTTTTCAGGTTTTATTCCAAGCAAGAAACACTGATCCTGGACAAGCTGGCGTCAGTTGATGGATTCTCAGATATCCATACTTCAGGACTGTAA 1962 42.76 MDGKEPVKDLAAFLIRCHSDQLSSISLSPDPNLHYPLVVEKRSAVMTKICYFGKSAHNNCQDQIPTTRLGLDSSIDRIPERIFNGLSDIAWFNGVRKKVFGGEMELFVAKDIVVGSEDHKTFPSIGSIRVRHRGILLTLKGTVIRSGAIKLYEGERFQIYPELESRNSIQLPSFCPSQKTRSCEGKSFECLEGSIIRHDYQEIKIQESTQILGVGSIPRTIPVIFKDDLVDIVKAGDDVIVTGVLSAKWSPELKDVRCDLDPMLIANYVRRTNELKSDIDIPEDVIVRFKQFWSNFNHTPLKGRNAILRGICPQVYGLFTVKLAVMLTLIGGVQQIDASGTKVRGESHLLLVGDPGTGKSQFLKFAAKLSNRSVITTGLGSTSAGLTVAAVKDGGEWMLEAGALVLADGGLCCIDEVDSMREHDRATIHEAMEQQTISVAKAGLVTTLRTRTIVFGATNPKGHYDPDQRIISLSVNTTLSGPLLSRFDIVLVLQDTKNAEWDAVVSSHILSEGEVEQGKFEDISKSWSLPMIRRYIHFVKGYFRPVLTKEAENIISNYYQLQRRSATHNAAHARLMFRNEVTRLDAITAILCVESSMTASAIVDSVGNALHSNFTENPDEECILFRFYSKQETLILDKLASVDGFSDIHTSGL 653
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1752229 1782735 + Bpe024529 Bpe15g00015 115694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00015 653 PANTHER DNA HELICASE MCM9 119 639 - -
Bpe15g00015 653 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 313 596 IPR027417 -
Bpe15g00015 653 PRINTS Mini-chromosome maintenance (MCM) protein family signature 483 491 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bpe15g00015 653 PRINTS Mini-chromosome maintenance (MCM) protein family signature 344 359 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bpe15g00015 653 PRINTS Mini-chromosome maintenance (MCM) protein family signature 430 443 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bpe15g00015 653 PRINTS Mini-chromosome maintenance (MCM) protein family signature 402 416 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bpe15g00015 653 Pfam MCM P-loop domain 305 511 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bpe15g00015 653 Gene3D - 124 274 IPR012340 -
Bpe15g00015 653 Gene3D - 288 602 IPR027417 -
Bpe15g00015 653 SMART mcm 121 598 IPR031327 GO:0003677|GO:0005524|GO:0032508
Bpe15g00015 653 SMART AAA_5 345 497 IPR003593 -
Bpe15g00015 653 ProSiteProfiles MCM family domain profile. 303 509 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bpe15g00015 653 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 119 639 IPR031327 GO:0003677|GO:0005524|GO:0032508
Bpe15g00015 653 SUPERFAMILY Nucleic acid-binding proteins 111 253 IPR012340 -
Bpe15g00015 653 Pfam MCM OB domain 127 247 IPR033762 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe15g00015 Bpe-Chr15:1752229 Bpe02g02150 Bpe-Chr2:22802576 1.08E-57 dispersed
Bpe15g00015 Bpe-Chr15:1752229 Bpe15g00852 Bpe-Chr15:18514200 1.20E-58 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00015 K10738 - csv:101205171 897.501