Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00054 ATGGGTTCAAATTTTTTAACTGGTACAATCTCTGAGGATTTGAAAAATTGTACCGGCTTGAAGCACTTGGATCTGGGTATGAATTATTTTTCAGGGAAATTTCCTGAGTTTTCTGCTTTAGCTGTATTGGAGTTTTTGAATTTGAATTGCAGTGGATTTTCTGGGCCATTTCCATGGAAATCGCTGCAAAGTCTTACCAACCTTGCTTTCTTAAGCCTTGGAGATAACCTATTTGATGAAAGTCCTTTTCCAAAAGAGGTTCTAGAACTCAAAAATCTGTACTGGCTTTACCTCACAAATTGCAGCATTAATGGAGAAATCCCATTTGGAATCGGAAATCTTTCTCTGCTGGAGAATTTAGAGCTCGCTGATAATAGATTGACCGGAGAAATACCAGCCGATATCGTCAACCTCAACAACCTATGGCAGCTTGAGCTTTACGATAACTACTTAACTGGAAAAATTCCCCAAGGATTTAGAAACCTCACAAGCCTTGTAAACTTCGACGCTTCCCGGAACAAGCTGGAAGGTAATTTAATGGAACTAAGCTTCTTGGCCAACCTTTCTTCCTTGCAACTCTTCGAAAACCAGTTCTTAGGTGTGATTCCAGAGGAGTTCGGAGAGTTTAAGAATCTTGTCAGCCTCTCTCTTTACAGAAATAAACTCAATGGAAGTCTCCCCCAAAGGATTGGGTCCTGGGCTGATTTTCTTTTCATCGATGTTTCAGAGAATTTTCTCTCAGGGCCTATACCTCCTGACATGTGCAAAAAGGGGAAGATGACCGATCTTCTTCTCCTTCAGAACAATTTCAATGGTGGGATTCCTGAAAGTTATTCGAACTGTAAGTCTTTGATTCGATTACGCATAAACAACAATTCCATTGCAGGTCGTGTTCCTCCAGGGATATGGAGCTTGCCAAATCTCATCATTCTTGATCTTTCCATGAATAAGTTTGAAGGTCCGATGACTTCTGACATAGGCAAGGCGAAGTCCCTTGCGCAGTTGTTTCTGTCTCACAATAGATTTGCCGATGAAATTCCGGCCACGATTTCTGAAGCATCGAAGTTAGTCTCAGTGCAGTTGAGTTCAAATCGATTTGTTGGTCCAATCCCGGATTCAGTAGGCAAGTTAGAGAAGCTTGGGAATCTTGATTTGGATGAGAATATGTTTAGCGGCAACATACCAAGCTCATTAGGCTCTTGCATAGCACTCTCAGAACTGAATCTTGCAGATAATTCATTCTCTGGACAAATTCCTGCTAGCATTGGATATTTGTCTGATTTAAACTCCTTAAATCTCTCCAAAAACAAACTTGTTGGGGAAATTCCGGCCAGTTTTTTGTCATTAAAGCTAAGCCTTCTTGATTTGTCAGACAATGAGTTGACCGGACATGTACCGGAGTCTTTATTTATGCAAGCTTCCGATGACAGCTTCGCCGGAAATCCAGGTTTGTGTACTCAGAGAATTAAATATCCGAGTCCTTGTTCATCAAATTCCGACAAGTCCAGCCATCTTCGAACACTAATGTCATGTTTCATAGCCGGAGTAATGGCCTTGCTAGTATCAGTTTCTTGTTTCTTATTTTTCAAAATAAGAAGAAAACAAAAGGAGAATCAACTGAAGACCCATGCTTGGAAAATGAAACCTTATCATGTCCTAAGTTTCACGGAGAAAGAAATTATCGAATCCATCAAACCTGAGAACTTAATTGGCAAAGGCGGGTCGGGAAATGTGTACAAGGCAAAGCTAAATAATGGCAAAGAACTGGCTGTGAAGCAAATCTTCACGTTAAGTAAAAGGGAGGGAATAACGTCCCGGAGTAGCACACCGATCCTGTCCAAACAGAAATTCCGGTCAACAGAATATGATGCTGAGGTAGCCACCCTAAGCTCAATAAGGCATGTCAATGTGGTGAAGCTGTACTGTAGTATTACGAGCGAGGATAGTAGTCTTCTAGTGTATGAGTACTTGTCGAATGGCAGCTTATACGATCAGCTCCACACAATCGGAAAAGCTGAAATCGGGTGGAAATTAAGGCACGAGATTGCTTTAGGGGCCGCTAGGGGATTGGAGTATCTACATCACGGCTGCGATCAACAGGTGATTCATGGAGATGTGAAGTCCAGCAATATTTTGTTGGACAACAACTGGATGCCTAAAATTGCAGATTTTGGACTCGCCAAGATCGAGAAGGCTGAAGCTAGCCACCAAGAATGGACTCATGTGGTTGCCGGAACACCTGGATACATAGCTCCTGAGTATGCATACACTAGCAAGATAAGCGAGAAGAGCGATGTATACAGCTTCGGAGTAGTGTTAATGGAATTAGTGACAGGAAAGAGGCCAGTGGAAGTGGAATTTGGAGACAGCAAAGACATAGTTAGCTGGGTTAGCTGCAAAATGAAGAGCAGAGGAAGGATGATGATGTTAGTGGATTCAAGAATCTCAGATAAATCAATGGAAGATGGTGTTGAAGTGCTGAAAATTTCATTGCATTGCACAAGGAAAGTTCCATCTCTAAGACCCTCCATGAGAATGGTGGTTCAAATGCTCGAAAATTTGACTCGATGA 2571 41.85 MGSNFLTGTISEDLKNCTGLKHLDLGMNYFSGKFPEFSALAVLEFLNLNCSGFSGPFPWKSLQSLTNLAFLSLGDNLFDESPFPKEVLELKNLYWLYLTNCSINGEIPFGIGNLSLLENLELADNRLTGEIPADIVNLNNLWQLELYDNYLTGKIPQGFRNLTSLVNFDASRNKLEGNLMELSFLANLSSLQLFENQFLGVIPEEFGEFKNLVSLSLYRNKLNGSLPQRIGSWADFLFIDVSENFLSGPIPPDMCKKGKMTDLLLLQNNFNGGIPESYSNCKSLIRLRINNNSIAGRVPPGIWSLPNLIILDLSMNKFEGPMTSDIGKAKSLAQLFLSHNRFADEIPATISEASKLVSVQLSSNRFVGPIPDSVGKLEKLGNLDLDENMFSGNIPSSLGSCIALSELNLADNSFSGQIPASIGYLSDLNSLNLSKNKLVGEIPASFLSLKLSLLDLSDNELTGHVPESLFMQASDDSFAGNPGLCTQRIKYPSPCSSNSDKSSHLRTLMSCFIAGVMALLVSVSCFLFFKIRRKQKENQLKTHAWKMKPYHVLSFTEKEIIESIKPENLIGKGGSGNVYKAKLNNGKELAVKQIFTLSKREGITSRSSTPILSKQKFRSTEYDAEVATLSSIRHVNVVKLYCSITSEDSSLLVYEYLSNGSLYDQLHTIGKAEIGWKLRHEIALGAARGLEYLHHGCDQQVIHGDVKSSNILLDNNWMPKIADFGLAKIEKAEASHQEWTHVVAGTPGYIAPEYAYTSKISEKSDVYSFGVVLMELVTGKRPVEVEFGDSKDIVSWVSCKMKSRGRMMMLVDSRISDKSMEDGVEVLKISLHCTRKVPSLRPSMRMVVQMLENLTR 856
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 6676096 6678795 - Bpe000988.1 Bpe15g00054 115733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00054 856 ProSitePatterns Serine/Threonine protein kinases active-site signature. 701 713 IPR008271 GO:0004672|GO:0006468
Bpe15g00054 856 Gene3D Ribonuclease Inhibitor 1 236 IPR032675 -
Bpe15g00054 856 CDD STKc_IRAK 570 854 - -
Bpe15g00054 856 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 1 854 - -
Bpe15g00054 856 Pfam Protein kinase domain 567 849 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe15g00054 856 ProSiteProfiles Protein kinase domain profile. 564 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe15g00054 856 SUPERFAMILY Protein kinase-like (PK-like) 544 852 IPR011009 -
Bpe15g00054 856 SUPERFAMILY L domain-like 2 232 - -
Bpe15g00054 856 PANTHER RECEPTOR-LIKE PROTEIN KINASE HAIKU2 1 854 - -
Bpe15g00054 856 SMART serkin_6 564 851 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe15g00054 856 Gene3D Ribonuclease Inhibitor 237 497 IPR032675 -
Bpe15g00054 856 Gene3D Phosphorylase Kinase; domain 1 547 656 - -
Bpe15g00054 856 ProSitePatterns Protein kinases ATP-binding region signature. 570 592 IPR017441 GO:0005524
Bpe15g00054 856 SUPERFAMILY RNI-like 190 468 - -
Bpe15g00054 856 Gene3D Transferase(Phosphotransferase) domain 1 657 856 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe14g00504 Bpe-Chr14:4473160 Bpe15g00054 Bpe-Chr15:6676096 1.96E-21 dispersed
Bpe15g00054 Bpe-Chr15:6676096 Bpe08g00394 Bpe-Chr8:2425650 1.95E-10 dispersed
Bpe15g00054 Bpe-Chr15:6676096 Bpe04g00409 Bpe-Chr4:2573605 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63750 PF00069 Pkinase 7.30E-44 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00054 - - qlo:115968334 1122.46