Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00130 ATGGCTTCCTCTGCCGGATTTTTCTTCTGCTCCTCCCCTGCCGCTTTCGTCGCCGTTCTGCTGTTTTTCTCTATCTTTTCTTCCGCTTTTGCTTCCTCTGATTTCTCCATTGTTGACTACGACTCGAAGCACCACATGGGCGCTCCTGATCGCACGGATAAGGAGGTTAGGGAAATTTATGAGTCATGGGTAGTTAAGCATGGCAAAGCCTACAACGCTCTTGGCGAGAAGGAGAAGAGATTTCAGATCTTCAAGGATAATCTGAGGTTCGTTGACGAGCACAACCTGGAGAACCGGACGTACAAGGTCGGTCTGAACCGATTTGCTGATCTCACGAACGAGGAGTACCGGACCACGTTTTTGGGATCCAAAAGAAGGCGGAAGGCTCGGCTCTCCGAGACCAAGAGCGACAGGTATCTGCATTGGGCTGGCGATGAGTTGCCGGATTCCATTGATTGGAGACAACACGGCGCTGTCGGGCCTGTTAAGGATCAAGGCCAATGTGGTTCTTGCTGGGCGTTCTCGACGATAGCTGCTGTGGAAGGAATAAATAAAATTGTTACAGGCGAGCATATCTCTTTGTCAGAGCAAGAACTAGTGGACTGTGACAGAACATACAACCAGGGATGCAATGGAGGTCTTATGGATTATGCATTCGAATTCATCATGAACAATGGTGGCATTGATTCCGAAGAGGACTACCCTTACAGGGCTCGTGATGGTGGCTGTGATCCGATCCGGAAAAACGCTAAGTTTGTGACGATCGACGGGTACGAAGATGTTCCAGAGAACGACGAGAACTCATTGAAGAAGGCAGTGTCAAACCAGCCTGTCAGCGTGGCCATTGAAGCCGGCGGTAGAGCTTTCCAACTTTACCAATCAGGCGTCTTTACGGGGCTATGCGGAATGGATTTGGATCACGGAGTTGTTGCAGTCGGTTACGGTACTGAAAACGGAGTCGATTACTGGACGGTGAGAAACTCGTGGGGACCCAATTGGGGCGAAAGCGGATATATCAGATTAGAGCGTAACTTGGCCAACATAACAACTGGTAAATGTGGAATTGCAATAGAGCCTTCGTATCCCATCAAGAAGGGACTAAACCCACCCAAGCCAAGCCCATCGCCACCATCGCCGGTGAAGCCCTCCACCGTGTGCGATGAATACAACTCATGCCCGGAGAAAACCACTTGCTGCTGTATCTATCAATATGGAACTTACTGCTTTGGCTGGGGATGTTGCCCTCTCGAGTCTGCCACTTGCTGCGACGACCATTACAGTTGCTGCCCTCAAGACTATCCCATTTGTGATCTCGAGGCGGAAACTTGCCTGATGAGCAAGAACAATCCCGTGGGAGTGAAGCCACTAAAGCGTCTCCCGGCAAAGCGAACAAGGACTGTGCTGAATTTTGAGAAAAAGGCGTAG 1425 50.25 MASSAGFFFCSSPAAFVAVLLFFSIFSSAFASSDFSIVDYDSKHHMGAPDRTDKEVREIYESWVVKHGKAYNALGEKEKRFQIFKDNLRFVDEHNLENRTYKVGLNRFADLTNEEYRTTFLGSKRRRKARLSETKSDRYLHWAGDELPDSIDWRQHGAVGPVKDQGQCGSCWAFSTIAAVEGINKIVTGEHISLSEQELVDCDRTYNQGCNGGLMDYAFEFIMNNGGIDSEEDYPYRARDGGCDPIRKNAKFVTIDGYEDVPENDENSLKKAVSNQPVSVAIEAGGRAFQLYQSGVFTGLCGMDLDHGVVAVGYGTENGVDYWTVRNSWGPNWGESGYIRLERNLANITTGKCGIAIEPSYPIKKGLNPPKPSPSPPSPVKPSTVCDEYNSCPEKTTCCCIYQYGTYCFGWGCCPLESATCCDDHYSCCPQDYPICDLEAETCLMSKNNPVGVKPLKRLPAKRTRTVLNFEKKA 474
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 11233300 11235213 - Bpe001069.1 Bpe15g00130 115809

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00130 474 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 305 315 IPR025660 -
Bpe15g00130 474 PRINTS Papain cysteine protease (C1) family signature 322 328 IPR000668 GO:0006508|GO:0008234
Bpe15g00130 474 PRINTS Papain cysteine protease (C1) family signature 307 317 IPR000668 GO:0006508|GO:0008234
Bpe15g00130 474 PRINTS Papain cysteine protease (C1) family signature 165 180 IPR000668 GO:0006508|GO:0008234
Bpe15g00130 474 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 165 176 IPR000169 -
Bpe15g00130 474 SUPERFAMILY Granulin repeat 384 417 - -
Bpe15g00130 474 SMART Inhibitor_I29_2 60 116 IPR013201 -
Bpe15g00130 474 Pfam Cathepsin propeptide inhibitor domain (I29) 60 116 IPR013201 -
Bpe15g00130 474 Pfam Granulin 397 444 IPR000118 -
Bpe15g00130 474 Pfam Papain family cysteine protease 147 363 IPR000668 GO:0006508|GO:0008234
Bpe15g00130 474 SUPERFAMILY Cysteine proteinases 52 363 IPR038765 -
Bpe15g00130 474 SMART GRAN_2 386 443 IPR000118 -
Bpe15g00130 474 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 322 341 IPR025661 -
Bpe15g00130 474 PANTHER CYSTEINE PROTEASE 41 392 - -
Bpe15g00130 474 Gene3D Granulin 383 446 IPR037277 -
Bpe15g00130 474 SMART pept_c1 147 363 IPR000668 GO:0006508|GO:0008234
Bpe15g00130 474 Gene3D Cysteine proteinases 36 365 - -
Bpe15g00130 474 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 41 392 - -
Bpe15g00130 474 CDD Peptidase_C1A 148 362 IPR039417 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00130 K25900 RD21; cysteine proteinase RD21 [EC:3.4.22.-] - zju:107426962 720.309
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01711 Bpe-Chr2:19597096 Bpe15g00130 Bpe-Chr15:11233300 6.83E-128 dispersed
Bpe04g00172 Bpe-Chr4:1121470 Bpe15g00130 Bpe-Chr15:11233300 0 dispersed
Bpe06g00184 Bpe-Chr6:4693361 Bpe15g00130 Bpe-Chr15:11233300 1.31E-166 dispersed
Bpe08g00759 Bpe-Chr8:9289624 Bpe15g00130 Bpe-Chr15:11233300 3.70E-116 dispersed
Bpe15g00130 Bpe-Chr15:11233300 Bpe15g00323 Bpe-Chr15:14770096 3.04E-164 dispersed
Bpe08g00549 Bpe-Chr8:3812767 Bpe15g00130 Bpe-Chr15:11233300 1.17E-73 transposed
Bpe12g00293 Bpe-Chr12:3686993 Bpe15g00130 Bpe-Chr15:11233300 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g875 . Blo16g00242 . . . . Bma06g00236 . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone19ag0184 . . . . . . Bda11g01632 . . Bpe15g00130 Bma03g01289 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001585 7 2 1 3 5 2 3 1 2 1 1 1 2 2 2 1 0 5 4 2 2 2 2 2 2 1 2 5 3 3 71
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe15g00130 Bpe_Chr15 FPKM 9.572436 11.411795 12.803762 13.412046 14.401187 15.522567 15.85958 13.036049 13.829157 15.351535