Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00141 ATGGATGAACCTTTGCTGTCAAGATCAAGAGCAGAGGAAGAATCTAGTAGAACATCGACGAGAAGAGAATTTCCTCCTGGCTACATCGATATCGGACAATCGTATCGCCAATCAACTTCGCATCTAATCACCTCCGATGCAATAATCCCAATCATCTCCACTCCGAAGTCTCCTTACATCAACGTCCTACCCACTTTTAACAAGAAGGGAAAAATCGCCCACCGCTCCCATTCCGCCCCGGCGCTATTCTCCGACATTAAGGAAGCATTCCGAGGTTCTTCGGACCCTAGGCCTGGTTGGAAGTTGCCCCCTTTAATTGTCCGGCAAGCTTTCGTCGGCCTCATACTATATTTCGCAATCGGCATTGTAGTCTACCTAACTGGGAGCTTCAAAGGAAAAACCACCTTTAAGCCGGTAGATGCCATGTACTTCACTGTCGTCACTCTTTGTACCATTGGCTATGGTGATATTGTTCCAGATTCTACATTTACTAAAATTTTTACTTGTGTCTTCATACTAGTTGGTTTTGGATTCATTGATATTCTGCTCAACGGCTTGGTCGTTTACATATGCGATCGACAAGAGGCGGTCTTGTTGAGCACGGTCGACGAGAATCGATTCAACGCCATGGTCAGGACCTACATGGTAGATAAGGAGAAGGGAAGAATGAGAATAAGAACAAAGGTGTGTTTGGCAGTGGGTGTTGTGGTCATTTGCATTGCTGTAGGGGCCATTGCTGTGCATTTTCTGGAGACATTGAATTGGGTTGATAGCATTTATCTTTCTATTACTTCTGTATCAACAGTGGGCTATGGAGATTATTCTTTTACAACTTTAGAAGGAAGATGCTTTGCCATCATTTGGCTTCTGGTCAGCACTTTGGCTGTTGCTAGGGCCTTTCTGTATCTCGCTGAGTTCAGAATTGACAAAAGAAACAGAAAAACTGCGACCTGGGTCCTTCAGAAGAAGATTACTATTGGCGATTTAGTAGCTGCCGATTTAGACCACAACGGATTCATCAGTAAATCTGAATTTGTTATTTACAAGCTCAAAGAGATGGGGAAAATCGCAGAGAAAGACATTCTACTGATTGGCAAACAATTTGATTTATTGGACACAAGCAACTGTGGCAAAATAACACTAGCTGATCTCATGGAAGATAAATGA 1167 43.27 MDEPLLSRSRAEEESSRTSTRREFPPGYIDIGQSYRQSTSHLITSDAIIPIISTPKSPYINVLPTFNKKGKIAHRSHSAPALFSDIKEAFRGSSDPRPGWKLPPLIVRQAFVGLILYFAIGIVVYLTGSFKGKTTFKPVDAMYFTVVTLCTIGYGDIVPDSTFTKIFTCVFILVGFGFIDILLNGLVVYICDRQEAVLLSTVDENRFNAMVRTYMVDKEKGRMRIRTKVCLAVGVVVICIAVGAIAVHFLETLNWVDSIYLSITSVSTVGYGDYSFTTLEGRCFAIIWLLVSTLAVARAFLYLAEFRIDKRNRKTATWVLQKKITIGDLVAADLDHNGFISKSEFVIYKLKEMGKIAEKDILLIGKQFDLLDTSNCGKITLADLMEDK 388
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 11549632 11551514 - Bpe001078.1 Bpe15g00141 115820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00141 388 SUPERFAMILY Voltage-gated potassium channels 218 324 - -
Bpe15g00141 388 MobiDBLite consensus disorder prediction 1 20 - -
Bpe15g00141 388 ProSitePatterns EF-hand calcium-binding domain. 333 345 IPR018247 -
Bpe15g00141 388 Gene3D - 106 197 - -
Bpe15g00141 388 SUPERFAMILY Voltage-gated potassium channels 104 190 - -
Bpe15g00141 388 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 52 384 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bpe15g00141 388 PANTHER OS01G0696100 PROTEIN 52 384 - -
Bpe15g00141 388 Pfam Ion channel 114 187 IPR013099 -
Bpe15g00141 388 Pfam Ion channel 235 305 IPR013099 -
Bpe15g00141 388 MobiDBLite consensus disorder prediction 1 27 - -
Bpe15g00141 388 SUPERFAMILY EF-hand 331 385 IPR011992 -
Bpe15g00141 388 Gene3D - 329 387 - -
Bpe15g00141 388 Gene3D - 198 327 - -
Bpe15g00141 388 PRINTS Two pore domain K+ channel signature 267 276 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bpe15g00141 388 PRINTS Two pore domain K+ channel signature 147 175 IPR003280 GO:0005267|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00807 Bpe-Chr1:9408926 Bpe15g00141 Bpe-Chr15:11549632 3.14E-96 transposed
Bpe08g01094 Bpe-Chr8:13015500 Bpe15g00141 Bpe-Chr15:11549632 2.08E-62 transposed
Bpe12g00286 Bpe-Chr12:3331927 Bpe15g00141 Bpe-Chr15:11549632 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00141 K05389 - cit:102629027 545.043