Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00162 ATGAGGAAGAGGGAGAGAGAGAATCCTTGCGGGGTTTGTGGCCATTATCACAAATACGAGGAAGGGGAAGTCTGCGGGATTTGTGGCCACCGCGTTCCGGTATCGTCGGAGAAAACGTCGATGCAATTAAGTGCCTTTCCGTCGGAGATCTTATCGGAATTTCTTTATTTGGGTAGCTATGACAATGCTTCGAGGCCCGAACTTCTCAAAACTCAGGGAATCTCCCGCGTTCTGAATAGTGTACCTGCTTGTCAAAATCTCTACAAGAATTCATTCACTTATCACTGCCTCGAATACGATAAATCTCTACCATTCGATGATGCAATTCAGTTTCTAGAGCAATGTGAAAGGGATAAAGCACGGGTTCTGGTACACTGCATGTCGGGGAAAAATAGGTCCCCGGCTATTGTAATAGCTTACTTAATGAAGAGCAAAGGGTGGAGACTCCAACAGAGCTATCAGTGGGTGAAAGAGCGGAGACCGTCTGTCGATATCACTGAAGCTGTCCATCAACAGTTGCAGGAGTTCGAGAAGAAAGCCTTTGGCTCGGCCGACACGAACAAATCTAACATGCCCGTTCTCCCTCCTGCAGTCTCCGGCACAACTTTTAGTTTTGGCTTCCCAAAAGTCAACGATCTGATTCCCATTCCTGCTTTCAATACTGCTGGTGGGACGTCCATTTTTTCCCGTTCGACTTCAGACATCCCTCGCGAGTTTACGTTTGGAGCCAGTCAGCAAAACCCCAGTGGAAGCGATGTGCCGATGGATAGCTCTTAA 777 47.75 MRKRERENPCGVCGHYHKYEEGEVCGICGHRVPVSSEKTSMQLSAFPSEILSEFLYLGSYDNASRPELLKTQGISRVLNSVPACQNLYKNSFTYHCLEYDKSLPFDDAIQFLEQCERDKARVLVHCMSGKNRSPAIVIAYLMKSKGWRLQQSYQWVKERRPSVDITEAVHQQLQEFEKKAFGSADTNKSNMPVLPPAVSGTTFSFGFPKVNDLIPIPAFNTAGGTSIFSRSTSDIPREFTFGASQQNPSGSDVPMDSS 258
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 12080494 12082792 - Bpe001098.1 Bpe15g00162 115841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00162 258 ProSitePatterns Tyrosine specific protein phosphatases active site. 124 134 IPR016130 GO:0016311|GO:0016791
Bpe15g00162 258 Pfam Dual specificity phosphatase, catalytic domain 55 178 IPR000340 GO:0008138|GO:0016311
Bpe15g00162 258 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 46 181 IPR029021 -
Bpe15g00162 258 CDD DSP_plant_IBR5-like 47 176 - -
Bpe15g00162 258 PANTHER PROTEIN-TYROSINE-PHOSPHATASE IBR5 1 258 - -
Bpe15g00162 258 PANTHER PROTEIN-TYROSINE-PHOSPHATASE IBR5 1 258 IPR044212 GO:0009734|GO:0009738|GO:0033549|GO:0043407
Bpe15g00162 258 SMART dsp_5 46 179 IPR020422 GO:0006470|GO:0008138
Bpe15g00162 258 ProSiteProfiles Dual specificity protein phosphatase domain profile. 46 182 IPR020422 GO:0006470|GO:0008138
Bpe15g00162 258 Gene3D Protein tyrosine phosphatase superfamily 40 190 IPR029021 -
Bpe15g00162 258 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 103 171 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe15g00162 Bpe-Chr15:12080494 Bpe04g01698 Bpe-Chr4:22896576 3.67E-13 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00162 K04459 - zju:107417407 423.705