Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe15g00166 | ATGCATTCTTGCAGAGTGGAGGTCACGGATCCTGGATCGGAAAAACAGAACCCAGTGAAAGAAATCAGATTCAGGGGCGTAAGGAAGCGGCCGTGGGGTCGTTACGCCGCCGAAATCAGAGATCCTTGGAAAAAGACTCGGGTATGGCTTGGCACCTACGATTCGGCAGAGGACGCTGCGCGGGCCTACGACACCGCCGCTCGAAAACTCCGGGGGCCGAAGGCGAAGACGAATTTCCCTTTGATCCCTTCCACCATCTCTTTTCAGCAGCAAGTTCCATTTGCTTTATCGCCGGACTTGCTTGATGTAAATGGATTCCGCAATACGAGCAGTGTTCAGGTCAATAGACCTACGTCTAGCAGTTTGAGCTCCACCGTAGAGTCTTCCAGTGGCCTCAGGGTGTCCGTCCGGCCGTCTTCCGCTCCGAAGATCCACCGGATGGTTCCGCCGGATGATTGCCGCAGCGACTGCGACTCGTCTTCCTCTGTTGTCGATGACGGCAATGATTGCGCTCACACGTCTTCATTCCGCAGAGTCTTGCCGTTCGATCTGAATCTCCTTCCTCCGATGACCGGTTTGGATTAA | 585 | 54.7 | MHSCRVEVTDPGSEKQNPVKEIRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTYDSAEDAARAYDTAARKLRGPKAKTNFPLIPSTISFQQQVPFALSPDLLDVNGFRNTSSVQVNRPTSSSLSSTVESSSGLRVSVRPSSAPKIHRMVPPDDCRSDCDSSSSVVDDGNDCAHTSSFRRVLPFDLNLLPPMTGLD | 194 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 12143119 | 12143703 | - | Bpe001103.1 | Bpe15g00166 | 115845 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe15g00166 | 194 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3 | 18 | 180 | - | - | |
Bpe15g00166 | 194 | PRINTS | Ethylene responsive element binding protein signature | 46 | 62 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe15g00166 | 194 | PRINTS | Ethylene responsive element binding protein signature | 24 | 35 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe15g00166 | 194 | SUPERFAMILY | DNA-binding domain | 24 | 81 | IPR016177 | GO:0003677 | |
Bpe15g00166 | 194 | MobiDBLite | consensus disorder prediction | 111 | 136 | - | - | |
Bpe15g00166 | 194 | MobiDBLite | consensus disorder prediction | 111 | 152 | - | - | |
Bpe15g00166 | 194 | Pfam | AP2 domain | 23 | 72 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe15g00166 | 194 | CDD | AP2 | 23 | 80 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe15g00166 | 194 | PANTHER | AP2 DOMAIN CLASS TRANSCRIPTION FACTOR | 18 | 180 | - | - | |
Bpe15g00166 | 194 | Gene3D | AP2/ERF domain | 22 | 82 | IPR036955 | GO:0003700|GO:0006355 | |
Bpe15g00166 | 194 | SMART | rav1_2 | 23 | 86 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe15g00166 | 194 | ProSiteProfiles | AP2/ERF domain profile. | 23 | 80 | IPR001471 | GO:0003700|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe04g00335 | Bpe-Chr4:2132206 | Bpe15g00166 | Bpe-Chr15:12143119 | 1.46E-33 | dispersed | |
Bpe08g01010 | Bpe-Chr8:12407811 | Bpe15g00166 | Bpe-Chr15:12143119 | 1.61E-31 | dispersed | |
Bpe14g00619 | Bpe-Chr14:5122835 | Bpe15g00166 | Bpe-Chr15:12143119 | 2.18E-61 | dispersed | |
Bpe15g00166 | Bpe-Chr15:12143119 | Bpe15g00897 | Bpe-Chr15:18866172 | 1.13E-25 | dispersed | |
Bpe15g00166 | Bpe-Chr15:12143119 | Bpe07g00522 | Bpe-Chr7:10998146 | 6.01E-64 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22539 | PF00847 | AP2 | 1.20E-13 | CL0081 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe15g00166 | K09286 | - | csv:101210265 | 206.068 |