Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00176 ATGGGGATGAGGAGCGCAGTAGGAGAAATTGTCGAAGTCCAAGGTGGCCATATCGTCCGCTCCACTGGCAGGAAAGACCGCCACAGCAAGGTCTACACAGCGAAAGGCCCTCGCGACCGACGGGTTCGCCTATCAGCCCACACTGCCATTCAGTTCTACGATGTTCAAGACCGCTTAGGTTACGATCGACCGAGCAAAGCTGTTGACTGGCTAATAAAAAAGGCTAAGTCCACCATTGACAAGCTCGCAGAGCTACCACCTTGCTATCCCACCGCCGTTGCTGAAGAAGGCGACACGAATAATGGCGGAAACGGGATGCTGATTGCGGCAGAGAAGTCCGAGTCATGTGGCTACAATTTCCACCCCCAAAGGCATTTGGAGAGTCAAGAAAATGGCAATTCGGGTTTCGTTCCTCATCCGCTATTTTCCGTTCCCCTAACAGACACCATGAAAACCTTCTTCCCCACAAACTCTGCGACGTCCTCCATAAATTTCCAGACTTACCCACCCGATATACTTTCAAGAACCGCAAACCCCACTCAAGATCTTGGCCTCTCTCTCCATACTTTTCAAGATCCTGACCTGATTGACTCGCAGGTAGAGCAAATCCACTCGCCACAAAACGATCAAAACCTTTTTCCCGGTTCGCATCAGGTAGGATATGAACCGAGTTATCCGAGAATGGTGGCCTGGGGAAACGATAGAGGCGCAGAACATGGAGGTGGGTTTGTTTTCAACTCGATTCCAAATTTAAGCCAAGGTAGCTCGGCTGCATTTTCTCAGAGGGAACCCCTTCAGTCCAGTTACTCAACTTCTGTGTCAGTTCGAAGTTGGAATGATCTTTCAGTTGCTTCCGCCAAAGACCAGAAAACTCTTTCAGTTCACCAACCTTCGTTGTTTGGTACTCGTTTCGTTTCTGATGAGCTGACTGGCTTTTGCATCCCAGGTCAGATTCCAGCCAACGATGACCATGGTATGGTTTCGGAGAGATTGTCGTCTTCTTCTATGAGCTCTCACCATTAG 1023 49.56 MGMRSAVGEIVEVQGGHIVRSTGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSTIDKLAELPPCYPTAVAEEGDTNNGGNGMLIAAEKSESCGYNFHPQRHLESQENGNSGFVPHPLFSVPLTDTMKTFFPTNSATSSINFQTYPPDILSRTANPTQDLGLSLHTFQDPDLIDSQVEQIHSPQNDQNLFPGSHQVGYEPSYPRMVAWGNDRGAEHGGGFVFNSIPNLSQGSSAAFSQREPLQSSYSTSVSVRSWNDLSVASAKDQKTLSVHQPSLFGTRFVSDELTGFCIPGQIPANDDHGMVSERLSSSSMSSHH 340
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 12358051 12359073 - Bpe001113.1 Bpe15g00176 115855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00176 340 Pfam TCP family transcription factor 23 87 IPR017887 -
Bpe15g00176 340 ProSiteProfiles TCP domain profile. 24 82 IPR017887 -
Bpe15g00176 340 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 98 IPR005333 GO:0003700
Bpe15g00176 340 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 121 340 IPR005333 GO:0003700
Bpe15g00176 340 PANTHER TRANSCRIPTION FACTOR TCP4 2 98 - -
Bpe15g00176 340 PANTHER TRANSCRIPTION FACTOR TCP4 121 340 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe14g00626 Bpe15g00176 CCT
Bpe14g00626 Bpe15g00176 ECH
Bpe12g00216 Bpe15g00176 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g01326 Bpe-Chr13:18426672 Bpe15g00176 Bpe-Chr15:12358051 7.31E-22 dispersed
Bpe14g00144 Bpe-Chr14:1901730 Bpe15g00176 Bpe-Chr15:12358051 2.72E-21 dispersed
Bpe15g00176 Bpe-Chr15:12358051 Bpe02g00984 Bpe-Chr2:9429808 2.18E-25 dispersed
Bpe12g00269 Bpe-Chr12:2698353 Bpe15g00176 Bpe-Chr15:12358051 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22541 PF03634 TCP 3.30E-30 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00176 - - gmx:100796390 380.948