Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00214 ATGGCTGTGGTGTTTCATGACCTTAGCTCTGCTTCTGGCCTTAAGAAACTAGATGAGTACCTGCTACCTCGCAGTTACATTACCGGTTATCAAGCCTCTAAGGACGATATTACGGTCCACGCAGCTCTCCATGGTGCCCCATCTGCTGAATTCGTTAACTTGTGTAGGTGGTACAATCATATTGAAGCACTCTTGAGAATTTCGGGTGTATCTGGAGAAGGTTCTGGTGTTATTGTTTCTAGTTGTGCTACCATTACAGAGGAAGCTGTTGCAACACCACCTGCTGGTGACTCAAAGGCTGCTGCTGTTGAGGATGATGATGATGATGATATTGATCTATTTGGTGAAGAAACTGAAGAGGAGAAGAAGGTTGCTGAAGAAAGAGCTGCTGCTGCTAAGTCATCGGCGAAGAAGAAAGAGTCTGGCAAGTCATCAGTTTTGTTGGATGTGAAGCCTTGGGATGACGAGACTGACATGAAAAAACTTGAAGAATCAGTGAGAGGTGTTCAAATGGAAGGATTGCTTTGGGGGGCATCCAAGCTCATGCCTGTTGGATATGGTATCAAGAAATTGCAGATAATGATGACTATTGTGGATGACCTGGTGTCTGTTGACAATCTCATCGAGGAGCATCTTACAGTCGAGCCAATCAATGAGTATGTTCAGAGCTGTGACATTGTGGCATTCAACAAAATCTGA 699 44.49 MAVVFHDLSSASGLKKLDEYLLPRSYITGYQASKDDITVHAALHGAPSAEFVNLCRWYNHIEALLRISGVSGEGSGVIVSSCATITEEAVATPPAGDSKAAAVEDDDDDDIDLFGEETEEEKKVAEERAAAAKSSAKKKESGKSSVLLDVKPWDDETDMKKLEESVRGVQMEGLLWGASKLMPVGYGIKKLQIMMTIVDDLVSVDNLIEEHLTVEPINEYVQSCDIVAFNKI 232
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 13276035 13277969 + Bpe001151.1 Bpe15g00214 115893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00214 232 CDD EF1B 146 232 IPR014038 GO:0003746|GO:0006414
Bpe15g00214 232 SMART EF1_GNE_2 143 232 IPR014038 GO:0003746|GO:0006414
Bpe15g00214 232 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 107 115 IPR001326 GO:0003746|GO:0005853|GO:0006414
Bpe15g00214 232 Pfam EF-1 guanine nucleotide exchange domain 145 232 IPR014038 GO:0003746|GO:0006414
Bpe15g00214 232 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 221 232 IPR001326 GO:0003746|GO:0005853|GO:0006414
Bpe15g00214 232 SUPERFAMILY GST C-terminal domain-like 11 68 IPR036282 -
Bpe15g00214 232 Coils Coil 115 135 - -
Bpe15g00214 232 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 1 232 - -
Bpe15g00214 232 MobiDBLite consensus disorder prediction 91 110 - -
Bpe15g00214 232 PANTHER RIPENING REGULATED PROTEIN DDTFR10-LIKE 1 232 - -
Bpe15g00214 232 SUPERFAMILY eEF-1beta-like 140 232 IPR036219 -
Bpe15g00214 232 Gene3D - 136 232 IPR014717 -
Bpe15g00214 232 Gene3D - 5 75 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00978 Bpe-Chr11:7277078 Bpe15g00214 Bpe-Chr15:13276035 4.83E-57 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00214 K03232 - mnt:21388962 343.584