Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00266 ATGGCTCCGGCGACTAACTGGCTCTCGTTCTCTCTATCTCCGGTTGAAATGCTGAGGTCTTCTGCTGAATCTCAGTTTATGCCTTACGACACCTCGTCCACTGCTTCTCATCACTACTTGATCGATAATATCTTCTCGAATGGTACTGCATCTGGGTTTCAAAGTTTGATTGTTCTTTCAGGTTGGGGAAACCCCAAACAAGTTCAAGCTTCAAGTAGTATCGCCGATTCACATATTCTGACTAGCTTCATCGACCACAATTGCCAAAACCAAGGAGCACCGAAACTGGAAGACTTTCTCGGTGAGTCGTCGCTAATGGTTCGATATTCCGATAGCCAAACGGAAACTCAAGACTCGTCTTTAACCCAAATCTATGACCATGGTCCAACCTACTACAACGACCAGCAATATCTCAAAGCTATTACCGGGTTTCAAGCTTTCTCAGCCAACTCTGGTTCGGAAGTGGATGACTCGGCATCTATCGCTCGGAACCAGCTCGCTTGCGGCGAGTTCGCCGGCCATTCTATTGAGTCGTCCGGGACCGGATTAGCCTTCACTAATTGTTCTACCGGTGCGCTGTCACTCGGGGTTGCTCAGAGATCGGAAAAGGCGGTTGTTCCGATTGAACCTGATAGCTCGAAGAAGATTGTTGATACTTTTGGCCAGCGAACTTCGATTTACAGAGGCGTTACGCGACACAGATGGACTGACATTAATACCGTATTAAATCTGTGGAATTTGTGTGCATTTTTAGGGGGATATGACAAAGAAGATAAGGCAGCGAGGGCTTATGATCTGGCAGCTTTGAAATATTGGGGTCCCACTGCCACTACCAACTTTCCTGTTTCTAATTACACCAAAGAACTGGAGGAGATGAAACATGTGACTAGGCAAGAATTCATTGCTTCTCTTCGAAGGAAAAGTAGTGGGTTTTCAAGGGGAGCTTCGATTTATCGAGGCGTGACAAGGCATCATCAACAGGGAAGGTGGCAAGCGAGAATAGGCCGAGTTGCCGGGAATAAGGATCTGTACCTTGGGACATTTGCGACAGAAGAGGAAGCGGCCGAAGCTTACGATATTGCAGCTATAAAGTTCAGAGGCTTAAATGCGGTCACAAACTTCGAGATGGGGCGGTACGATGTGGAAGCAATTTCAAAGAGCAATCTCCCCATAGGAGGAGCTGCAAAAAGGTTGAAGCTCTCACTCGATTCCGAGCAGAAGCCATCCATTATGCAACATAATTTACAGCCATCGTGCATTAGCGGCGGAAACAACATAAGTTTTGGTGCAATTCAACCTGTTCCGGCTATCGCATGTGGAGTGCCGTTCGAAGCTTCTACTTCGCCAATGCTTTATCATCATAATCTCTTCCACCACCTCCAACCCAACAACACTAGTATGCCTGGTTCGACTTCTAGCCCTACTATGACAGCTCCTACTCATGTGATGCCACGGCCGCCAGAATTTTATGTGTGGCCTCACCAGTCCTATTGA 1494 47.26 MAPATNWLSFSLSPVEMLRSSAESQFMPYDTSSTASHHYLIDNIFSNGTASGFQSLIVLSGWGNPKQVQASSSIADSHILTSFIDHNCQNQGAPKLEDFLGESSLMVRYSDSQTETQDSSLTQIYDHGPTYYNDQQYLKAITGFQAFSANSGSEVDDSASIARNQLACGEFAGHSIESSGTGLAFTNCSTGALSLGVAQRSEKAVVPIEPDSSKKIVDTFGQRTSIYRGVTRHRWTDINTVLNLWNLCAFLGGYDKEDKAARAYDLAALKYWGPTATTNFPVSNYTKELEEMKHVTRQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGLNAVTNFEMGRYDVEAISKSNLPIGGAAKRLKLSLDSEQKPSIMQHNLQPSCISGGNNISFGAIQPVPAIACGVPFEASTSPMLYHHNLFHHLQPNNTSMPGSTSSPTMTAPTHVMPRPPEFYVWPHQSY 497
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 14018552 14021987 + Bpe001205.1 Bpe15g00266 115945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00266 497 ProSiteProfiles AP2/ERF domain profile. 226 281 IPR001471 GO:0003700|GO:0006355
Bpe15g00266 497 PRINTS Ethylene responsive element binding protein signature 227 238 IPR001471 GO:0003700|GO:0006355
Bpe15g00266 497 PRINTS Ethylene responsive element binding protein signature 357 377 IPR001471 GO:0003700|GO:0006355
Bpe15g00266 497 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 5 473 - -
Bpe15g00266 497 SUPERFAMILY DNA-binding domain 225 283 IPR016177 GO:0003677
Bpe15g00266 497 Pfam AP2 domain 317 367 IPR001471 GO:0003700|GO:0006355
Bpe15g00266 497 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL6 5 473 - -
Bpe15g00266 497 CDD AP2 225 283 IPR001471 GO:0003700|GO:0006355
Bpe15g00266 497 ProSiteProfiles AP2/ERF domain profile. 317 375 IPR001471 GO:0003700|GO:0006355
Bpe15g00266 497 SUPERFAMILY DNA-binding domain 316 376 IPR016177 GO:0003677
Bpe15g00266 497 SMART rav1_2 317 381 IPR001471 GO:0003700|GO:0006355
Bpe15g00266 497 SMART rav1_2 226 287 IPR001471 GO:0003700|GO:0006355
Bpe15g00266 497 CDD AP2 316 375 IPR001471 GO:0003700|GO:0006355
Bpe15g00266 497 Gene3D AP2/ERF domain 226 283 IPR036955 GO:0003700|GO:0006355
Bpe15g00266 497 Gene3D AP2/ERF domain 317 376 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g01222 Bpe-Chr8:13820585 Bpe15g00266 Bpe-Chr15:14018552 2.44E-84 dispersed
Bpe11g01266 Bpe-Chr11:9463537 Bpe15g00266 Bpe-Chr15:14018552 1.59E-88 dispersed
Bpe15g00266 Bpe-Chr15:14018552 Bpe04g00142 Bpe-Chr4:956633 2.37E-78 dispersed
Bpe13g00163 Bpe-Chr13:9425966 Bpe15g00266 Bpe-Chr15:14018552 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22550 PF00847 AP2 1.90E-10 CL0081 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00266 K09285 - jre:108990656 649.432