Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00281 ATGGGTTTTGATAACCATCTTTGCGACATGGGTCTTCTTCTAGGTTTAGGATTCACTTCTACCCAGGATTCTGAATCAAACACTGTCAATCCGTTTTTGAAGAAACCTACCTTCTATCACGTCGGAGGAGGTCTCAAGCCGTCTTTAACTTTGGGTCTTTCCGGCGAGACTCACCGAATCCGAAGCCAAAAGATTGATATGAACAAAGGTTGTGAGGAGGGAGATGATCTGATTCGGCAAGCTTCGTCGCAAAGTGCTGTTTCTTCTTTCTCCAGTGGCAGGGTGAAGAGAGACAGAGAGCATAGCAGTGAGGAGGTCGAGGTGGAGAAAGTCTCGTCAAGAGTAAGCGATGAAGATGAAGATGGTTCTAATGCCAGAAAGAAACTTAGGCTGACAAAAGATCAGTCTGCCCTCCTGGAAGAAAGCTTCAAACTCAACAGCACTCTCAACCCGAAGCAAAAGCAAGCTTTAGCTAGGCAGCTAAATCTCCGACCCAGACAAGTTGAAGTGTGGTTCCAGAACAGACGAGCGAGAACAAAGCTCAAGCAAACAGAAGTAGACTGCGATTTTCTGAAGAAATGCTGCGAAACCCTGACAGATGAAAACAGAAGGTTACAGAAAGAGCTTCAGGATCTGAGGGCAGTAAAAATGGCTCAACCCCTTTACATGCACATGCCGGCAGCAACCCTCGCGATCTGTCCTTCTTGTGAGAGGCTCAACGATGGAGTTTCCAAGACTCCATTTTCCATGGCTTCGAAGCCCGTCTTCTACAATCTCTTCACTAATCCTTCTGCTGCTTGTTAG 804 46.64 MGFDNHLCDMGLLLGLGFTSTQDSESNTVNPFLKKPTFYHVGGGLKPSLTLGLSGETHRIRSQKIDMNKGCEEGDDLIRQASSQSAVSSFSSGRVKRDREHSSEEVEVEKVSSRVSDEDEDGSNARKKLRLTKDQSALLEESFKLNSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCDFLKKCCETLTDENRRLQKELQDLRAVKMAQPLYMHMPAATLAICPSCERLNDGVSKTPFSMASKPVFYNLFTNPSAAC 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 14286829 14287845 - Bpe001221.1 Bpe15g00281 115960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00281 267 ProSiteProfiles 'Homeobox' domain profile. 122 182 IPR001356 GO:0003677
Bpe15g00281 267 MobiDBLite consensus disorder prediction 93 127 - -
Bpe15g00281 267 SUPERFAMILY Homeodomain-like 115 183 IPR009057 -
Bpe15g00281 267 CDD homeodomain 126 183 IPR001356 GO:0003677
Bpe15g00281 267 SMART HOX_1 124 186 IPR001356 GO:0003677
Bpe15g00281 267 MobiDBLite consensus disorder prediction 82 127 - -
Bpe15g00281 267 Pfam Homeodomain 126 180 IPR001356 GO:0003677
Bpe15g00281 267 Gene3D - 119 187 - -
Bpe15g00281 267 SMART halz 182 225 IPR003106 GO:0006355|GO:0043565
Bpe15g00281 267 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT22 6 267 - -
Bpe15g00281 267 Coils Coil 188 215 - -
Bpe15g00281 267 ProSitePatterns 'Homeobox' domain signature. 157 180 IPR017970 GO:0000981|GO:0006355
Bpe15g00281 267 PANTHER - 6 267 - -
Bpe15g00281 267 Pfam Homeobox associated leucine zipper 182 215 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00652 Bpe-Chr6:17223437 Bpe15g00281 Bpe-Chr15:14286829 9.17E-63 dispersed
Bpe10g00572 Bpe-Chr10:12688150 Bpe15g00281 Bpe-Chr15:14286829 5.30E-64 dispersed
Bpe08g00716 Bpe-Chr8:8561256 Bpe15g00281 Bpe-Chr15:14286829 2.85E-37 transposed
Bpe10g00025 Bpe-Chr10:368378 Bpe15g00281 Bpe-Chr15:14286829 1.07E-90 wgd
Bpe15g00281 Bpe-Chr15:14286829 Bpe02g00472 Bpe-Chr2:3063647 2.86E-59 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22552 PF00046 Homeodomain 2.20E-16 CL0123 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00281 K09338 - pop:7497727 343.199