Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00315 ATGTCATTTCTGAAACAACTCGGGAGCCACATCTCTTCATTTTTTGATTTGTTATCCAAGAACAACATAAACTCAGAACTTATTCTAAGGCATTACCATGAAGCTGAACAGTTAATGAAGCAGTTGAACCCAGTTATAAAAGCACTTGTTGATCTTGAAATACAGTTTGATGAGGAAGTTCATAAGCCATTTGAAGAACTAATTCATTTTGCGGATGAATTGATCGAGCATTACGAAAAGTGGCGACCATTTTCAAGCAAAGTATTCTTTGTTCTGCAAAGTGAAGACCTGATATCAAAGATCAAAAAACATGTCTTGGTTATTATCCAACTTCTGCAGACTTCAAATGAACAATTGAATGCGGCATTGATGTTAAGTGAGCAATGGGCTGAAGACATTGAGCGCAAGAAATCTGAACGACTGTCAACTATCATCAGCGATGCTCTTAGATATCAAGTAGAGGGCAGTCGGCCCAGCTCACGCATGTTGGTGAAAATGGCAGAGTGCCTGAACTTATGTACAAACCAAGAGATTCTGATTGAGGCAGTAGCACTGCAGAAGTTGAAAGAGAATGCTGAAGAAGCTGAGCAGAACGACGAAGCTGAGCATATTGATCAAATTATTTGTCTTCTGATGTCCATGCATGAGCTGCTAATTGCAATTAAGAAGTCTCAAATTCATAGTCCTGTCGAAATACCTGCCGATTTGTTCTGTCCCATCTCTCTAGAACTAATGACTGATCCAGTGATTGTGACATCTGGACAAACCTATGAACGGAGTTTTATCAAGAACTGGATCGACCTTGGCCTTGATGTTTGTCCCAAGACAAGACAGAAATTGGTCAACACTAATTTGTGTACTAATATTATCGTCAAGGCACTTATCACAAACTGGTGTGAAATAAACAATGTGAAGCTACCTGATTCCACTTGTACAGTGAGCTTAAACCAGACATTGGTTGAAATCAGTGAGCGTAAACCTGATAAGAGGTTAAAGTCATCCAATGAAATCAGGGAGGAAGCTTCTCCTTCTTATGCCAGTAGGTTAAAGTCATCCAATGAAATCAGGGAGGAAGCTTCTCCTTCTTATGCCAGTCTTACAGCCGAAGGTTCTCTGGTGGCTAACTCTGGTAATGACCTGGATATGGAAGACCGACAAGGAGCTGACTCTAGTAGAAGTGATTTTCCCTTTGTGGAGGAAGAAGAAATTCAAACTATCAGTAGAGCTGCAACTGACCCGAATGAAATTTCTAATCCTAACTTTTCTCCTACAATATCAGACGATGCTGATGAAGCTTTTCCGGTCTCAACTACTTTGAGTAAGTATGAAGGCAATGAGTTTGAGAAGGTTAAACCAGAGTCGCCACTTAGATTGATGGATGGACCATATCGAGACCAAACTCCGAGCAGGTCGTTAGTGAATTTTGTCCCTCAAATAGTTCCTTCATCTGGGACTGGAACCAGCAATGACCTTGACGGGATTGAATCTCAAGTTAAGAATCTAGTTCAGGACCTGAGGAGCACTTCATACAATACTTTACTAGAGGCTACGGAGCAATTACGGCTGCTTGCAAAGGTCGACACAGAAAATCGGATTCTGATTGCAACTTGTGGAGCCATCAGCCTTTTAGTCAATCTGCTCCACTCTCCTGATGCTAAGATCCAGGAATATTCAGTCACTGCCCTTCTTAACTTATCAATCAACGATAATAACAAAAGTATCATTACTGAGGCTAATGCCATTGAACCACTGATTCATGTCCTCGAAACTGGCAGCTCGGAGGCAAAAGAGAACTCGGCTGCTACCCTTTCCAGTATTTCAGTGATTGGAGATAATAAGATCAGGATTGGAAGTTCTGGAGCAATAGGACCATTGATTGAATTGTTGGAGAAAGGCAGTCCAAGGGGAAAGAAAGATGCAGCCACAGCCCTGTATAATTTGTCGTTAGCAAGCGAAAACAAGGCCAAGATCGTTCAAGCCGGAGGTGTGAAACATCTGGTGGACTTGATGAACCCGGCATATGGTATCGTGGACAAAGCCGTTTCGGTGTTGGCGAATTTGGCGACAATTCAGGATGGTAAGAAGGAGATCGGTGAACACCCTGGTGGCATTCCTGCATTGGTCGAGGTAGTGGAGCTGGGTTCTGCTCGAGGAAAAGAAAGTGCAGCCGCGGCCCTTTGGCTTCTTTGCTCTGCTAATAATAAATTTTGTTGGATGATGCTACACGGAGGAGCAGTTCCTCCATTGGCGGTGCTGTCACAATCTGGCACCCCGAGGGCCCGAGAAAAGGTCAGTTTCTTCCTGTTGGTTCTCAAGTTTCAATTTATCGAAAGAAGACATTGA 2343 42.77 MSFLKQLGSHISSFFDLLSKNNINSELILRHYHEAEQLMKQLNPVIKALVDLEIQFDEEVHKPFEELIHFADELIEHYEKWRPFSSKVFFVLQSEDLISKIKKHVLVIIQLLQTSNEQLNAALMLSEQWAEDIERKKSERLSTIISDALRYQVEGSRPSSRMLVKMAECLNLCTNQEILIEAVALQKLKENAEEAEQNDEAEHIDQIICLLMSMHELLIAIKKSQIHSPVEIPADLFCPISLELMTDPVIVTSGQTYERSFIKNWIDLGLDVCPKTRQKLVNTNLCTNIIVKALITNWCEINNVKLPDSTCTVSLNQTLVEISERKPDKRLKSSNEIREEASPSYASRLKSSNEIREEASPSYASLTAEGSLVANSGNDLDMEDRQGADSSRSDFPFVEEEEIQTISRAATDPNEISNPNFSPTISDDADEAFPVSTTLSKYEGNEFEKVKPESPLRLMDGPYRDQTPSRSLVNFVPQIVPSSGTGTSNDLDGIESQVKNLVQDLRSTSYNTLLEATEQLRLLAKVDTENRILIATCGAISLLVNLLHSPDAKIQEYSVTALLNLSINDNNKSIITEANAIEPLIHVLETGSSEAKENSAATLSSISVIGDNKIRIGSSGAIGPLIELLEKGSPRGKKDAATALYNLSLASENKAKIVQAGGVKHLVDLMNPAYGIVDKAVSVLANLATIQDGKKEIGEHPGGIPALVEVVELGSARGKESAAAALWLLCSANNKFCWMMLHGGAVPPLAVLSQSGTPRAREKVSFFLLVLKFQFIERRH 780
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 14650719 14654340 - Bpe001251.1 Bpe15g00315 115994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00315 780 MobiDBLite consensus disorder prediction 326 394 - -
Bpe15g00315 780 MobiDBLite consensus disorder prediction 338 374 - -
Bpe15g00315 780 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 620 662 IPR000225 GO:0005515
Bpe15g00315 780 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 661 702 IPR000225 GO:0005515
Bpe15g00315 780 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 11 771 - -
Bpe15g00315 780 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 538 580 IPR000225 GO:0005515
Bpe15g00315 780 Coils Coil 175 205 - -
Bpe15g00315 780 Pfam U-box domain 232 302 IPR003613 GO:0004842|GO:0016567
Bpe15g00315 780 SUPERFAMILY ARM repeat 498 771 IPR016024 -
Bpe15g00315 780 SMART Ubox_2 235 298 IPR003613 GO:0004842|GO:0016567
Bpe15g00315 780 PANTHER U BOX DOMAIN-CONTAINING 11 771 - -
Bpe15g00315 780 CDD RING-Ubox_PUB 238 278 IPR045210 -
Bpe15g00315 780 Pfam Armadillo/beta-catenin-like repeat 651 688 IPR000225 GO:0005515
Bpe15g00315 780 Pfam Armadillo/beta-catenin-like repeat 611 648 IPR000225 GO:0005515
Bpe15g00315 780 Pfam Armadillo/beta-catenin-like repeat 527 566 IPR000225 GO:0005515
Bpe15g00315 780 Pfam Armadillo/beta-catenin-like repeat 568 607 IPR000225 GO:0005515
Bpe15g00315 780 Gene3D - 491 771 IPR011989 -
Bpe15g00315 780 ProSiteProfiles U-box domain profile. 231 305 IPR003613 GO:0004842|GO:0016567
Bpe15g00315 780 SMART arm_5 609 649 IPR000225 GO:0005515
Bpe15g00315 780 SMART arm_5 568 608 IPR000225 GO:0005515
Bpe15g00315 780 SMART arm_5 691 731 IPR000225 GO:0005515
Bpe15g00315 780 SMART arm_5 527 567 IPR000225 GO:0005515
Bpe15g00315 780 SMART arm_5 650 689 IPR000225 GO:0005515
Bpe15g00315 780 SUPERFAMILY RING/U-box 229 307 - -
Bpe15g00315 780 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 231 306 IPR013083 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe06g00004 Bpe15g00315 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00419 Bpe-Chr6:15581888 Bpe15g00315 Bpe-Chr15:14650719 2.32E-143 dispersed
Bpe14g01175 Bpe-Chr14:8792724 Bpe15g00315 Bpe-Chr15:14650719 7.24E-06 dispersed
Bpe15g00171 Bpe-Chr15:12207958 Bpe15g00315 Bpe-Chr15:14650719 1.77E-09 dispersed
Bpe15g00315 Bpe-Chr15:14650719 Bpe08g01367 Bpe-Chr8:14743875 1.75E-07 dispersed
Bpe15g00315 Bpe-Chr15:14650719 Bpe06g00004 Bpe-Chr6:76505 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00315 - - tcc:18611233 724.161