Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00328 GCAGAGATGGATGGGGAAGACGAAGTGAGAGAGGGGACGACGAAGAAGAGATCGAAGGATAATCAGAGGCCGTACAAAGGGATTCGAATGAGAAAGTGGGGAAAATGGGTGGCTGAGATTCGAGAACCGAATAAACGCTCCAGACTTTGGCTGGGTTCTTACTCTTCGCCGGTGGCGGCGGCTAGGGCTTACGACACTGCCGTTTTTCATTTAAGGGGCCCATCAGCGCGGCTTAACTTCCCGGAGCTTTTGGCGGCGGAAGAATGGGGGGTTCCCACCGGAGACGATATGTCGGCCGCTACTATAAGGAAGAAAGCCGCGGAGGTCGGCGCGCGAGTGGATGCTATCGAGAGTTCTCATCAATACGACCATTCTTCCTCTGTCATGGTGACTCCGTCGTTGAAGGGCGGGGGTGGGTTTTCGGATCAGGTGGATTTAAACAAGCTGCCGGAGCAGGAAGAGTCGGAGGGGGAGCCTGGTTAG 483 55.49 AEMDGEDEVREGTTKKRSKDNQRPYKGIRMRKWGKWVAEIREPNKRSRLWLGSYSSPVAAARAYDTAVFHLRGPSARLNFPELLAAEEWGVPTGDDMSAATIRKKAAEVGARVDAIESSHQYDHSSSVMVTPSLKGGGGFSDQVDLNKLPEQEESEGEPG 160
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 14794749 14795231 + Bpe001264.1 Bpe15g00328 116007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00328 160 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-10 12 156 - -
Bpe15g00328 160 SMART rav1_2 24 87 IPR001471 GO:0003700|GO:0006355
Bpe15g00328 160 MobiDBLite consensus disorder prediction 1 25 - -
Bpe15g00328 160 ProSiteProfiles AP2/ERF domain profile. 24 81 IPR001471 GO:0003700|GO:0006355
Bpe15g00328 160 Pfam AP2 domain 25 73 IPR001471 GO:0003700|GO:0006355
Bpe15g00328 160 MobiDBLite consensus disorder prediction 121 160 - -
Bpe15g00328 160 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 12 156 - -
Bpe15g00328 160 MobiDBLite consensus disorder prediction 8 25 - -
Bpe15g00328 160 Gene3D AP2/ERF domain 24 82 IPR036955 GO:0003700|GO:0006355
Bpe15g00328 160 PRINTS Ethylene responsive element binding protein signature 25 36 IPR001471 GO:0003700|GO:0006355
Bpe15g00328 160 PRINTS Ethylene responsive element binding protein signature 63 83 IPR001471 GO:0003700|GO:0006355
Bpe15g00328 160 CDD AP2 25 83 IPR001471 GO:0003700|GO:0006355
Bpe15g00328 160 SUPERFAMILY DNA-binding domain 25 82 IPR016177 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe13g00099 Bpe15g00328 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01799 Bpe-Chr2:20246667 Bpe15g00328 Bpe-Chr15:14794749 6.01E-58 dispersed
Bpe06g00197 Bpe-Chr6:6660948 Bpe15g00328 Bpe-Chr15:14794749 1.19E-58 dispersed
Bpe13g00099 Bpe-Chr13:6315264 Bpe15g00328 Bpe-Chr15:14794749 9.06E-94 dispersed
Bpe14g00301 Bpe-Chr14:3026381 Bpe15g00328 Bpe-Chr15:14794749 6.59E-26 dispersed
Bpe15g00328 Bpe-Chr15:14794749 Bpe05g00566 Bpe-Chr5:19796795 3.16E-24 dispersed
Bpe15g00328 Bpe-Chr15:14794749 Bpe02g00436 Bpe-Chr2:2846045 2.70E-51 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22559 PF00847 AP2 1.90E-10 CL0081 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00328 K09286 - csv:101214481 207.223