Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00330 ATGGATCACAAACCGTGGCTTTGGAGGAAGAAATCTTCGGAGAAGTCGGCCACTTCGGGAGATAAAGTTAATTTCCCTGTAAAAGCAAGCGAGGAAGAGATAAAGATACTAATGACAGAAAAAGCGGGATTGGAGAAGAATCTAAGAATTGTGAATGATAAGCTTTCTTCTGCTTTGTCCGAGTGTAATGCAAAAGATGAACTGGTGAAGAAAAACACAAACGTAGCTCAGGAAGCAATTTCAGGATGGGAGAAAGCAGAAGCAGAAGCAATTGTTTTAAGGCAGGAATTAGATGAAGCTATCAAGCAAAGAGATGCTGGTAAAGAAAGAATCGCAAATCTAGATTCAGCTCTCGAAGAATGCACGAAGCAACTACGCTTTGTTCGGGAAGAGAAGGAGCAACGAATTCATGATGCTATCGTGAAGACATCATCGGAATTCGAAAAATCACGGACAGAGTTGGAGGAAAAACTAAAAGAGAAGGGTGAAAGGCTTTCGACAATGGGTGTTGAAAGCACTCAGCTCAGCAAGGCTTTACTAGCGAAGGAAAAGATCATCGACAGTTTACATAAACGGTTGGCTGAGGCGGATGCAAATTTTAATACTCTGTTGTCGAGATTGGAATCGACGGAGAAAGATAATAATTCGCTAATATATGAGGCTCGAGTGCTTGAAAAGGAGGTTGAAATCCGCAATGAGGAAAGGGAATTCAATCGAAGAACTGCAGAATCATCTCATAAGCAGCACTTGGACAGTGTAAAAAGAATTGCAAAGTTAGAATCCGAGTGTCAGAGGCTGCGTATACTAGTCCGGAAGAGGTTGCCAGGCCCTGCAGCCTTGGCAAAAATGAAAAATGAAGTTGAAATATTGGGAAGGGATTCGTCTGAAATAAGGAGGAAACAATCAACTTCAACGGGTTTGGTCTGTCTCTCTAACTTAGATCACTCTCCAGAGACTCCAAACCAACGAATTAGTGTTCTTACGGAACAATTGTCAAATTTAGAAGAGCAAAATAGGTTTCTCGAGGAAGCTCTTAGTAAAAAGACTGTTGAACACCAGTTTTCAAAAATTATGCACACTCGTTCGACTTCCAAAGTATCAAATGAGCTTTGTCGGGCGACCATTTCTTATACAGACAGTGATGATATGGTTAGTTCTGCTGAATCACCTGCGTGTTCTTTGATTACAGATTTAGACCACTTCAGAAATGGACAGGAGAAATGCTCATCGCCATGCAAAACCATAGGAGGGTCTTTGGACTTGAATCTGATGGATGACTTTGCTGAAATGGAAAAATTAGCCATTGACTCTGTTAATACACCAGTTGGAAATTCTCAAATCTGTTCAAACAAAGATTACAAATTGGCAGGCTCTTTTATAGGTGAGTCAAATGGGAGTCTTTCCAATCCAACAGCTAGGAAGACAGTTAAACTTGATAATGAATCAAGTTTCAGCCCACGCAATCTGGCTGTCGGGTCTAAGAATTCATCTATCACTGAAGTCTCTGGTTTGGAGTATATCCAGTTCTTACAAAGTAACCCTGATAAAATACTCGAGAATACGCAAATTGTTCTGGCAGAGAGAGATAATCATGCCTCGTCAGATCTGAAAGAATTTATTTGTAAATTGATCGAGCTTGTTGAAGGGATAAGTTTTCCGTCTCCAGATTATAACAACTCTGAAAAAGTTAAAAAGGGTGAGAACTTGATTTCAGAAGTTCCTACGGGGTACATGATTCGTGTTTTTTTGTGGAAAATTTCCGAACTGAGCACTGTTCTGAACCAATTTTTGTGCAACTGTCGCCAGATGTTAAATGGTAGGGCTAGTTTTTGCAAGTTTGTGGAAGGACTAACTATTACCTTGGACTGGATTCTCAACCACTGCTTTTCGCACCAAGATGTCTCAAGCATAAAACATTCATTCATGAAACAATTTGATTTGGAGGGATCACGAAGTGAGAGTGAAGTTGAAAGTGGAATGATTGGTCTCGAAGTCGACAAATCAAGTAATCCTAACGAGAAGTTATGTTACCTTACCATGGCTGCAGTCTCTATAAATCACGATCCTCAAATAGAAGAAGTGCAGTCTAGCGTGAAAGAAGAAAATAATAAACTGGAAGAAGAATTAGTTTCCATCAAAAGTGGAAAAAAGAGGCCGGTAGAAGCTGATGATAAAACCCAGAATCAGGATAAATCTCTTGGTAATCAACTTACAGCGATCAAATTTCAACTAAATGAAGCTCGCCAAGACAAATATGACCGCAAACATAACTGTCAGACAGGAAATGTCGAATCATCTTTCCAGCTTGAAAGCTCGGAGGGGAAACAAAATCCCAAAAATGACTCAGTTCGGGAAGATAAGTGTCTTCGTACAGACTTGGAGATAACAGCTGCTTCAGAGAAGTTAGCAGAGTGCCAAGAGACTATTCTAAACCTCAGCAGGCAGCTAAAGGAACTTGCTGCAACTAAGGAAGCAACACTTTCTAACAACGTTGTCACTCCTCCCATCACAATCAACCAGGAAGAGACAAATGTCACGCAGCAAGAGGACAATAGTTCGAGCCATCGATCCTCACTGCTAGATCGGATGGCTGAGGATGATGCTGTGGCAGAATATGAACTTCCGAAGTCCGTAGCAGTCGACGCAAATTCCACTACGACCGAACCACAAGACAAGTTTATCTTAGTGGATGATCTTGAAAATCAGGTTGAGAATGGAAAAGGTGGTTCTTGGGCAATTGTGCCCGCTAAAAAACTAAAAAAGGGGAGCTTGTGGAGAAGACTGCTGTGGAGAAAGAAGAAAGGTAAGAGCCTAAAACTACCTGTACCATTTACCTCATAA 2841 40.94 MDHKPWLWRKKSSEKSATSGDKVNFPVKASEEEIKILMTEKAGLEKNLRIVNDKLSSALSECNAKDELVKKNTNVAQEAISGWEKAEAEAIVLRQELDEAIKQRDAGKERIANLDSALEECTKQLRFVREEKEQRIHDAIVKTSSEFEKSRTELEEKLKEKGERLSTMGVESTQLSKALLAKEKIIDSLHKRLAEADANFNTLLSRLESTEKDNNSLIYEARVLEKEVEIRNEEREFNRRTAESSHKQHLDSVKRIAKLESECQRLRILVRKRLPGPAALAKMKNEVEILGRDSSEIRRKQSTSTGLVCLSNLDHSPETPNQRISVLTEQLSNLEEQNRFLEEALSKKTVEHQFSKIMHTRSTSKVSNELCRATISYTDSDDMVSSAESPACSLITDLDHFRNGQEKCSSPCKTIGGSLDLNLMDDFAEMEKLAIDSVNTPVGNSQICSNKDYKLAGSFIGESNGSLSNPTARKTVKLDNESSFSPRNLAVGSKNSSITEVSGLEYIQFLQSNPDKILENTQIVLAERDNHASSDLKEFICKLIELVEGISFPSPDYNNSEKVKKGENLISEVPTGYMIRVFLWKISELSTVLNQFLCNCRQMLNGRASFCKFVEGLTITLDWILNHCFSHQDVSSIKHSFMKQFDLEGSRSESEVESGMIGLEVDKSSNPNEKLCYLTMAAVSINHDPQIEEVQSSVKEENNKLEEELVSIKSGKKRPVEADDKTQNQDKSLGNQLTAIKFQLNEARQDKYDRKHNCQTGNVESSFQLESSEGKQNPKNDSVREDKCLRTDLEITAASEKLAECQETILNLSRQLKELAATKEATLSNNVVTPPITINQEETNVTQQEDNSSSHRSSLLDRMAEDDAVAEYELPKSVAVDANSTTTEPQDKFILVDDLENQVENGKGGSWAIVPAKKLKKGSLWRRLLWRKKKGKSLKLPVPFTS 946
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 14826830 14830960 + Bpe001267.1 Bpe15g00330 116009

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00330 946 PANTHER FILAMENT-LIKE PLANT PROTEIN 7 1 939 - -
Bpe15g00330 946 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 939 - -
Bpe15g00330 946 MobiDBLite consensus disorder prediction 709 728 - -
Bpe15g00330 946 Coils Coil 193 227 - -
Bpe15g00330 946 Coils Coil 795 822 - -
Bpe15g00330 946 Coils Coil 111 131 - -
Bpe15g00330 946 Coils Coil 27 54 - -
Bpe15g00330 946 Coils Coil 83 103 - -
Bpe15g00330 946 Coils Coil 280 300 - -
Bpe15g00330 946 MobiDBLite consensus disorder prediction 751 785 - -
Bpe15g00330 946 Coils Coil 324 351 - -
Bpe15g00330 946 Coils Coil 144 164 - -
Bpe15g00330 946 Pfam Filament-like plant protein, long coiled-coil 521 745 IPR008587 -
Bpe15g00330 946 Pfam Filament-like plant protein, long coiled-coil 733 826 IPR008587 -
Bpe15g00330 946 Pfam Filament-like plant protein, long coiled-coil 65 367 IPR008587 -
Bpe15g00330 946 Pfam Filament-like plant protein, long coiled-coil 367 528 IPR008587 -
Bpe15g00330 946 Coils Coil 691 711 - -
Bpe15g00330 946 MobiDBLite consensus disorder prediction 1 21 - -
Bpe15g00330 946 MobiDBLite consensus disorder prediction 709 734 - -
Bpe15g00330 946 MobiDBLite consensus disorder prediction 1 17 - -
Bpe15g00330 946 MobiDBLite consensus disorder prediction 759 776 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00330 - - - jre:109009098 776.163
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00358 Bpe-Chr2:2329763 Bpe15g00330 Bpe-Chr15:14826830 1.58E-66 dispersed
Bpe10g00221 Bpe-Chr10:8415882 Bpe15g00330 Bpe-Chr15:14826830 2.58E-37 dispersed
Bpe15g00902 Bpe-Chr15:18891190 Bpe15g00330 Bpe-Chr15:14826830 2.99E-82 transposed
Bpe13g00101 Bpe-Chr13:6446274 Bpe15g00330 Bpe-Chr15:14826830 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g1098 . . . . Bpe15g00330 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Vvi7g1035 . . . . . Bpe15g00330 . . . . . Cma20g00997 . . . . . . . . . . . . . . . . . . . Cone6ag1404 Cone9ag1331 Cone8ag0137 Cone12ag0138 . . . . . . . . . . . . Sed01g0434 . . . . . . . . Bhi10g01788 Tan05g1631 Cmetu11g1117 . Hepe10g1432 . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003264 2 4 2 1 3 1 2 1 1 1 1 1 2 1 1 2 1 4 2 1 1 1 1 1 1 1 1 3 3 3 50
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe15g00330 Bpe_Chr15 FPKM 70.934105 89.942833 9.781518 7.950232 12.309586 11.660407 10.834472 7.830188 6.556769 7.416706