Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe15g00335 | ATGGCCGACGAGCAGCCTACGATCGCCGGTCGACGGAGGAGTCGCGGCTCCGAGGCATTGGCCCGTGCTGACGCTCTTCAACGCCTAAAAGCCCTAAGAAGCAGTGGCCGACGGTCTGACAATGGCGGAGTGCAAATTAAGGTGGAAAACCCTATTTATGACACTGTTCCTGAGGATGAGTACGACGCACTGGTCGCCAAGCGTCGGGAAGAAGTTAAAGGGTTTATCGTCGACGACGACGGATTTGGGTACTGCGACGAAGGCGAGGAGGAGGATTGGTCCAAAACTGGACTTCCTTTGTCTTCTGATGATTCCGAAGGTGAAAGGGAGAGACCTAAGAAAAAGAAGGTGGAGAAGAAAGAATCGCAGCCTAAAAAACAGTCTTCTTCACTTTCAGCAGCTGCAGCAATGATGGGGAAGCAAAGGCTTTCTTCTATGTTCACTTCATCAATTTTTAAGAAGAGTGGCAGGGATGATAAATCTAAAGGTTTGGTATGCGATACACTCGTGGACGATGTAATTGCAGAGTTTGCACCAGATGAGGAAGATAGAGAAAAACGAAGAAGGGGACAGATGAATTCCATGCAGATTTCGAAGAATTTAGTGCCAATTGCTGGTGTTAAGAGTGACAAACCTTGTGTTCGAACTGTTAATCCGGCATTCAGTCATGAAGTTTCTAAGGCTGTGGATATTGGAGAGTTGAAATGTAGCAAGATTAATACAAATGAAAATTCAGACTTAGTTTTTGTGCAAGGTGACGTGGAAGTCAAGAGAGATGGTGTAAATGAGGAGTTTAAGGAAGATAAAGACTTCATTTCTAAATTCAGAGAGGGCACAACTCAGCATGTGCATGTTTCGCCAACCAAGGAGAGTTTAGTTGAAGAGCAGGATCCGAAAATGATTGAAATAAAAGCAGAACAGGTGGTGAAGGACGGAGCTTATACTTTGAATGCAAAAATTAGAGAAGAAAGTAACCCCGAATTAAGCGCCATTGTTGGATGGCAGGCGGTAAGAAGTCAGCGGAATTGCGACATTGATGGTGTTGCAGAAATCAATAATAGCACATGTTCTGAGGAAAAATGTGAATTAGATCTGGACTCAAATAGCGCGATGCCTTTCTACATAGTCGATGCATATGAGGAATTCTATGGTGCTAACACTGGGAATGTGTATCTTTTCGGAAAGGTCAAATCTGGAGGTATGCATCATAGTTGTTGTGTTGTTGTGAAGAACATGCAGAGATGTGCATATGCAATTCCAAAAGATTTTTTTCTTCGCTCAAATGAGATGATTAAGCTCGAGAAAGATGTGGAAGAGTCTCGACTTTCTCCTGCAGATCTCCGAACAAAACTGCAAGAAGCGACTGCAGGATTAAAGAATGAAGTATCAAAGCATTTGTTAGATCTCAACATCTCATCTTTTAGCATGACTCCTGTTAAGAGGAAGTATGCCTTTGAGCGACATGATATACCTTCAGGAGAAAACTACGTTCTTAAGATCAACTATCCATTCAAGGACAACCCTCTTCCATCAGGTCTAAGAGGAGAATCATTTTCTGCTCTTCTAGGAACTCATTGCAGTGCCTTGGAGCTCTTTCTTGTTAAAAGAAAGATAAAGGGACCATCTTGGTTGTCAGTTTCCAAGTTTTCTAATTGCCCCAGTCCCCAACGGGTAAGCTGGTGCAAATTTGAGGTGACTGTGGACTCTCCAAAAGATATATGTATTTCTTCAAACAGTACAATGGAGATCCCTCCTGTTGTTGTTGCTGCAATAAATTTGAAGACTATCATCAATGAAAAGCAGAATGCTAATGAAATTGTTTCTGCATCTGTCATTTGTTGTCACAAAGTCAAGAAAGATCTTCTTTACATAAGTGCCTGGTACTTGATCTTTCAGATTGACACTCCCATGTTGTCTTCAGAATGGAAGAGACCTGGTATGCTGACACATTTTACAGTTGTTCGAAAGCTTGATGGAGCTATATTTCCAATGGGGTTCTCTAAAGAGGCTACAGATAGAAATTCTAAGGCTGGATATAATGTCTTAATCTCTGAAAGCAATGAAAGGGCTTTGTTAAATCGACTACTGATTGAGCTATACAAATTGGATATCGATGTACTGGTTGGACATAACATTTCAGGGTTTGACCTGGACGTTCTCCTCCATAGAGCTCAGGCTTGCAGAGTTCCAAGCAGCATGTGGTCCAAAATTGGTCGCCTAAAGCGGTCTATGATGCCTAAGCTTGGAAAAGGAACCAACATTTTTGGGTCAGGGGCGAGTCTTGGAATCATGTCTTGCATTGCTGGTCGACTTTTATGTGACACATACTTGTGTTCCCGTGATTTATTGAAAGAGGTTAGTTACTCCCTGACAGAATTGTCTAAGACCCAGCTTAATAAGGAACGCAAGGAGATTACTTCTCATGATATTCCCAGAATGTTCCAGACATCAGAATCTCTAATGCAACTTATTGAATTTGGTGAGACAGATGCATGGCTGTCTATGGAACTCATGTTTCATTTGAGTGTTCTTCCTCTAACACGGCAGCTGACTAATATCAGTGGTAATCTTTGGGGGAAAACTCTACAAGGTGCTAGGGCTCAAAGAGTGGAGTATCTGCTTCTTCATGCATTCCATGCTAAGAAATATATTGTGCCAGACAAAATTTCTTCTCAAAATAAGGATAAGAGTTTGAAAAAAAGGACAAGCAGTGGTATTGAGGAGAGAAACGTGAATCAACTTGACACGGATGACATGAATATCAATTATGATGCTTCACACGATGATGTTGGAAAAGGAAAGAAGGGTCCTTCCTACGCAGGTGGGCTGGTCTTGGAGCCAAAAAAAGGTTTATATGATAAGTATATATTGCTTCTGGATTTCAATAGTCTTTATCCTTCTATAATACAGGAATATAATATTTGCTTCACTACAGTAAATATACCTTCAGATGGGGCTGTTCCTCGTCTTCCATCTACTAAAACTATGGGAGTTCTTCCGGAGCTGTTAAAAAATCTAGTTCAAAGAAGAAGAATGGTGAAGTCATGGATGAAGAATGCATCTGGTCTCAAGGTGCGGCAACTAGACATTCAACAGCAAGCTCTAAAGCTCACTGCAAATAGTATGTATGGATGTCTGGGATTTTCTAATTCAAGGTTTTATGCAAAGCCACTTGCAGAGCTTATTACCCTACAAGGAAGGGAGATTCTGCAGAGTACTGTTGATCTTGTTCAGAATAATTTGAACTTGGAGGTAATATATGGTGATACAGATTCCATTATGATTTATAGTGGATTGGACGATATACCACAAGCAAAAGCAATTGCAAGAAAAGTTAACAAGAGATATAAGTGTTTGGAAATTGATCTTGATGGTTTATACAAGAGAATGTTGCTTCTAAAGAAAAAGAAGTATGCAGCTGTAAAGATGCAGTTCAAGGATGGAATACCATATGAGGTTATCGAACGGAAGGGCCTTGATATAGTTCGCCGGGACTGGAGCTTACTATCAAAGGAATTAGGAGATTTTTGTTTAAGTCAAATATTGTCTGGAGGGTCATGTGAAGATGTTGTTGAATCGATTCACAACTCTCTTTTGAAGATACAAGAAGATATGAGGGACGGGCAAGTACCGCTTGATAAATATATCATCACAAAGACAATGACTAAGCCACCTGAAGCATACCCAGATGCCAAAAATCAACCCCACGTTCAAGTGGCACAAAGGTTGAAGCAAATGGGGTATTCTACTGGTTTTTCTGTAGGTGACACCATTCCTTACATAATCTGTCGTCAGCAGGGATCCTCTTCTGATAGTTCTACAGGAATTGCACAACGTGCTCGTCATCCCGAGGAGTTGAAAAGAGAAGATGGAAAATGGATAATTGACATTGATTACTATCTGTCCCAACAGATTCATCCAGTTGTCTCTCGACTTTGTGCTTCAATTCAGGGTACCAGTCCTGAACGCTTAGCTGACTGTTTAGGGCTCGACTCTTCCAAGGTAAAATTTTCATTTTTAAGCCGTGTCCGTGTTCTGACAATCGTTTCAATCACTTGTAGATATCGGGGTTGCAAACCTCTGACATTGTCATGTCCAAGCTGTTCGATTACATTTGATTGCCCGACTATCTTTAGCACAATTTGTACATCAGTCAGTGAAAAGAGTAAGTCTAATGTGGACGAATCGACCACGAGTTTTTGGAGCAAATTGCATTGTCCTAAATGCCCAGAAGATAGCAATGTGGGTAGAATCTCTCCTGGCATGCTTGCCAATCAGGTTAAAAGGCAAGCAGTGTGGTTCATTTCAATGTATTACAAAGGCGTGATGATGTGTGATGAAGAGACTTGCAAGTGCACCACTCGCTCTCTCAATCTCCGTCTTATTGGTGGTGCTGAGAAAGGAACTGTATGCCCTAATTATCCACACTGCAAAGGTCGTCTTGTGAGAAAGTACTCGGCTAAGGATCTATACAAGCAAGTTTTATATTTCTGCCTTGTATTGGATACTGTACGATGTATAGAAAAGGTGGAAATCAGCACCAGAATGACATTAGAGAAAAAATTGGCCAAAATTCGACCTATGGTTGATTTAGCAGCATCTACCATTCATCGAATTCGAGATCAGAATGCATATGGTTGGGTACAGTTACAGGATATTGCCGTCACAATTTGA | 4674 | 41.23 | MADEQPTIAGRRRSRGSEALARADALQRLKALRSSGRRSDNGGVQIKVENPIYDTVPEDEYDALVAKRREEVKGFIVDDDGFGYCDEGEEEDWSKTGLPLSSDDSEGERERPKKKKVEKKESQPKKQSSSLSAAAAMMGKQRLSSMFTSSIFKKSGRDDKSKGLVCDTLVDDVIAEFAPDEEDREKRRRGQMNSMQISKNLVPIAGVKSDKPCVRTVNPAFSHEVSKAVDIGELKCSKINTNENSDLVFVQGDVEVKRDGVNEEFKEDKDFISKFREGTTQHVHVSPTKESLVEEQDPKMIEIKAEQVVKDGAYTLNAKIREESNPELSAIVGWQAVRSQRNCDIDGVAEINNSTCSEEKCELDLDSNSAMPFYIVDAYEEFYGANTGNVYLFGKVKSGGMHHSCCVVVKNMQRCAYAIPKDFFLRSNEMIKLEKDVEESRLSPADLRTKLQEATAGLKNEVSKHLLDLNISSFSMTPVKRKYAFERHDIPSGENYVLKINYPFKDNPLPSGLRGESFSALLGTHCSALELFLVKRKIKGPSWLSVSKFSNCPSPQRVSWCKFEVTVDSPKDICISSNSTMEIPPVVVAAINLKTIINEKQNANEIVSASVICCHKVKKDLLYISAWYLIFQIDTPMLSSEWKRPGMLTHFTVVRKLDGAIFPMGFSKEATDRNSKAGYNVLISESNERALLNRLLIELYKLDIDVLVGHNISGFDLDVLLHRAQACRVPSSMWSKIGRLKRSMMPKLGKGTNIFGSGASLGIMSCIAGRLLCDTYLCSRDLLKEVSYSLTELSKTQLNKERKEITSHDIPRMFQTSESLMQLIEFGETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHAFHAKKYIVPDKISSQNKDKSLKKRTSSGIEERNVNQLDTDDMNINYDASHDDVGKGKKGPSYAGGLVLEPKKGLYDKYILLLDFNSLYPSIIQEYNICFTTVNIPSDGAVPRLPSTKTMGVLPELLKNLVQRRRMVKSWMKNASGLKVRQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIYSGLDDIPQAKAIARKVNKRYKCLEIDLDGLYKRMLLLKKKKYAAVKMQFKDGIPYEVIERKGLDIVRRDWSLLSKELGDFCLSQILSGGSCEDVVESIHNSLLKIQEDMRDGQVPLDKYIITKTMTKPPEAYPDAKNQPHVQVAQRLKQMGYSTGFSVGDTIPYIICRQQGSSSDSSTGIAQRARHPEELKREDGKWIIDIDYYLSQQIHPVVSRLCASIQGTSPERLADCLGLDSSKVKFSFLSRVRVLTIVSITCRYRGCKPLTLSCPSCSITFDCPTIFSTICTSVSEKSKSNVDESTTSFWSKLHCPKCPEDSNVGRISPGMLANQVKRQAVWFISMYYKGVMMCDEETCKCTTRSLNLRLIGGAEKGTVCPNYPHCKGRLVRKYSAKDLYKQVLYFCLVLDTVRCIEKVEISTRMTLEKKLAKIRPMVDLAASTIHRIRDQNAYGWVQLQDIAVTI | 1557 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 14870019 | 14881554 | - | Bpe001273.1 | Bpe15g00335 | 116014 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe15g00335 | 1557 | PANTHER | DNA POLYMERASE ALPHA CATALYTIC SUBUNIT | 14 | 1555 | - | - | |
Bpe15g00335 | 1557 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Bpe15g00335 | 1557 | Pfam | DNA Polymerase alpha zinc finger | 1352 | 1553 | IPR015088 | GO:0003887|GO:0006260 | |
Bpe15g00335 | 1557 | ProSitePatterns | DNA polymerase family B signature. | 1087 | 1095 | IPR017964 | GO:0000166|GO:0003676 | |
Bpe15g00335 | 1557 | MobiDBLite | consensus disorder prediction | 78 | 137 | - | - | |
Bpe15g00335 | 1557 | Pfam | DNA polymerase family B | 857 | 1315 | IPR006134 | GO:0000166|GO:0003677 | |
Bpe15g00335 | 1557 | PRINTS | DNA-directed DNA-polymerase family B signature | 1032 | 1044 | IPR006172 | GO:0000166|GO:0003676|GO:0003887 | |
Bpe15g00335 | 1557 | PRINTS | DNA-directed DNA-polymerase family B signature | 1085 | 1093 | IPR006172 | GO:0000166|GO:0003676|GO:0003887 | |
Bpe15g00335 | 1557 | PRINTS | DNA-directed DNA-polymerase family B signature | 956 | 969 | IPR006172 | GO:0000166|GO:0003676|GO:0003887 | |
Bpe15g00335 | 1557 | TIGRFAM | pol2: DNA polymerase (pol2) | 51 | 1313 | - | - | |
Bpe15g00335 | 1557 | SUPERFAMILY | Ribonuclease H-like | 372 | 886 | IPR012337 | - | |
Bpe15g00335 | 1557 | Gene3D | - | 373 | 572 | - | - | |
Bpe15g00335 | 1557 | Pfam | DNA polymerase family B, exonuclease domain | 402 | 792 | IPR006133 | - | |
Bpe15g00335 | 1557 | MobiDBLite | consensus disorder prediction | 1 | 19 | - | - | |
Bpe15g00335 | 1557 | MobiDBLite | consensus disorder prediction | 88 | 125 | - | - | |
Bpe15g00335 | 1557 | SUPERFAMILY | DNA/RNA polymerases | 882 | 1331 | IPR043502 | - | |
Bpe15g00335 | 1557 | Gene3D | - | 1159 | 1341 | IPR042087 | - | |
Bpe15g00335 | 1557 | Gene3D | Helix hairpin bin | 995 | 1046 | - | - | |
Bpe15g00335 | 1557 | Gene3D | Palm domain of DNA polymerase | 926 | 1146 | IPR023211 | - | |
Bpe15g00335 | 1557 | SMART | polmehr3 | 584 | 1099 | IPR006172 | GO:0000166|GO:0003676|GO:0003887 | |
Bpe15g00335 | 1557 | CDD | DNA_polB_alpha_exo | 584 | 849 | - | - | |
Bpe15g00335 | 1557 | Pfam | DNA polymerase alpha subunit p180 N terminal | 26 | 93 | IPR024647 | - | |
Bpe15g00335 | 1557 | Gene3D | - | 584 | 913 | IPR036397 | GO:0003676 | |
Bpe15g00335 | 1557 | CDD | POLBc_alpha | 932 | 1331 | IPR045846 | GO:0003887|GO:1902975 | |
Bpe15g00335 | 1557 | Gene3D | - | 413 | 539 | - | - | |
Bpe15g00335 | 1557 | Gene3D | DNA Polymerase alpha, zinc finger | 1350 | 1542 | IPR038256 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe09g00594 | Bpe-Chr9:14671232 | Bpe15g00335 | Bpe-Chr15:14870019 | 3.07E-25 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe15g00335 | K02320 | - | jre:109009092 | 2185.61 |