Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00363 ATGGAAAGCGGGTTTGGACAATCAACAAGCATGCCACCACAAAATCCGTCTTGTTCAAGCAATAATAGCAATGATGCAGGCGATTTTGAGTGCAATATTTGCTTTGAATTGCCTCAAGACCCCATTGTTACTCTCTGTGGACATCTCTTTTGCTGGCCTTGCTTGTACAGATGGCTGCATCATCATTCACATTCTCAAGAATGCCCAGTTTGTAAGGCTCTTGTTCAGGAAGATAAGTTGGTTCCTCTCTACGGCAGGGGCAAAACTCAGGCTGATCCGAGATCAAAATCATATCCTCAGTTTGATATTCCCAATCGCCCGGCTGGTCAACGACCGGAAACTGCTCCTCCACCAATGTCAAACCAGTTCACTAATTACGGGTTTGGATTAACAGGTGGTTTTGCACCAGCAACTACTGCGAGAATTGGTAACTTCACATTGGCCACTGCTGTCGGTGGTTTGATACCTTCTTTATTTAATATCCAGTTTCATGGATTTTCTGATGCAACTGTTTATGGAACAACTTCGGGGTTTCCATATCCTTATAATGCATATCATGGGGGTCATGCTCACGGATTTCCTCACCAGCCAAGCCGAGGACAACAAGGAGACAGCTTTTTGAAGAATCTTCTTTTATTGATTGCTGTTTTTGTGATTCTTGCTCTGCTTTGTTGGTGA 678 43.81 MESGFGQSTSMPPQNPSCSSNNSNDAGDFECNICFELPQDPIVTLCGHLFCWPCLYRWLHHHSHSQECPVCKALVQEDKLVPLYGRGKTQADPRSKSYPQFDIPNRPAGQRPETAPPPMSNQFTNYGFGLTGGFAPATTARIGNFTLATAVGGLIPSLFNIQFHGFSDATVYGTTSGFPYPYNAYHGGHAHGFPHQPSRGQQGDSFLKNLLLLIAVFVILALLCW 225
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 15181409 15182086 - Bpe001300.1 Bpe15g00363 116042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00363 225 ProSiteProfiles Zinc finger RING-type profile. 31 72 IPR001841 -
Bpe15g00363 225 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 14 85 IPR013083 -
Bpe15g00363 225 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 2 224 IPR045103 GO:0005783|GO:0006511|GO:0061630
Bpe15g00363 225 PANTHER RING ZINC FINGER PROTEIN-RELATED 2 224 - -
Bpe15g00363 225 MobiDBLite consensus disorder prediction 1 21 - -
Bpe15g00363 225 SUPERFAMILY RING/U-box 27 84 - -
Bpe15g00363 225 SMART ring_2 31 71 IPR001841 -
Bpe15g00363 225 Pfam Zinc finger, C3HC4 type (RING finger) 29 76 - -
Bpe15g00363 225 ProSitePatterns Zinc finger RING-type signature. 46 55 IPR017907 -
Bpe15g00363 225 CDD RING-HC_AtRMA_like 29 73 - -
Bpe15g00363 225 MobiDBLite consensus disorder prediction 86 116 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00486 Bpe-Chr11:3752536 Bpe15g00363 Bpe-Chr15:15181409 2.47E-29 dispersed
Bpe11g01467 Bpe-Chr11:10927678 Bpe15g00363 Bpe-Chr15:15181409 1.90E-07 dispersed
Bpe10g00217 Bpe-Chr10:8334740 Bpe15g00363 Bpe-Chr15:15181409 1.08E-128 transposed
Bpe15g00363 Bpe-Chr15:15181409 Bpe02g00406 Bpe-Chr2:2636777 1.73E-91 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00363 K10666 - mnt:21392517 397.897