Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00364 ATGTTGGGATTCGTAGCTTGTATTTCTTCTGCAGCTGTTTCAAGTTTCGTACTATGTTGCAGAGGCCATGGTTGGGTCAACGATGAGAGATCTCCTGGTCAGTTCTCTTGGGAAGTAAAGCGTATTTTCATGTTAAAAGTGTTACCTAGCAAGCATCCATGGAGGGTAATCATGAGATGGTTACTACTTCTATTAATGTTAAGAATCGGTTATTCGTCCGAGGAGCCTGATGTGGAAGGTGAAGCATTGGTTGATTTGCTCAGAGCGCTCAATGATTCCAATCATAAAATAACAGATTGGAACGATAATTTTGTAAGCCCTTGTTTTAGCTGGTCTCACGTCACTTGCAGAAATGGAAATGTAATATCTTTGAGCTTAGCATCAATTGGATTTTCAGGATTACTTTCACCGTCCATAACCAAATTGAAATACTTGTCTAGCCTGATTTTGAAAGGAAACCACTTATCTGGAACCATTCCTGATTCAATCACAAATCTTACTGGATTGGTGGAACTGGATCTTTCGGACAGTGACTTAACAGGAAAAATTCCAGAGAAGCTTTTTTTTACAGGAACACGTTTAATATGTGGTTCTGGCTTTGAAAAACCCTGTGTTTCTAGCACTCTTCATGCAGATAGAACAAAGAAAATGAAACTTAGTGTGATTGTGACTTCTGCTAGTGGTGGAGCATTCATCATGTTTTCAATTGGTGTACTTTTTGCATACGGTTATTGCTACATTCACAAACATAGAGAGGAGATGTTTGTTGATGTCGCAGGTGAAGATGATAGTAAAATTTCCTTCGGTCAAGTGAGGAGATTTTCCTGGCGTGAACTCCAACTTGCTACTGATAACTACAGAGAAGCCAACGTTATCGGGCAAGGAGGTTTTGGTAAGGTGTACAAAGGTGTCCTCTCAAACAACACCGAGGTTGCCATCAAACGCATGATCGATTTTAACAGTCCTGGCGGGGAGGCTGCTTTTCTGAGAGAAGTTCAACTTATAAGCGTTGCTGTTCATAAAAATCTCCTCCGTTTGATCGGTTTTTGTACAACCTCAACTGAGAGAATCCTTGTTTATCCTTTCATGAAGAATCTTAGTGTTGCGTACTGCTTGAGAGATTTGAAACCTGGGGAAAAAGGCTTGGACTGGCCAACTAGGAAACGAATAGCATTTGGTGCAGCCCACGGTTTAGTGTATTTGCACGAGGATTGCAATCCTAAAATCATCCATCGTGATCTAAAAGCTGCAAATATCCTGTTAGATGATGACTTTGAAGCTGTACTTGGAGATTTTGGGCTAGCAAAGCTAGTCGATACAAATTTGACGCAAATTACAACTCAAGTGCGAGGTACAATGGGACACATTGCTCCCGAATACTTGTGCACTGGTAAATCATCAGAAAAGGCTGATGTATTTGGATATGGTATAACACTTCTCGAACTTGTGACTGGTCAACGTGCAATTGATCTTTCACGTCTTGAAGAAGAGGAGGATGTTCTTTTGCTTGATCATATCAAGAAGTTGCTAAGAGAAAAGCGGCTCGACGACATTGTCGATAAAAGCTTGAAGAGCTATGACGCCGAAGAAGTGGAAGCGATGATTCAAGTTGCCTTGCTCTGCACGCATAGTTTGCCTGAGCACCGGCCTGTGATGAGAGAAGTGGTGAGTCTTTTGGAAAGAGTTAACCTGGCAGAAAGATGGGGAGAGTGGATGGTTCTTGAAGAGACGAGGGATCAACAGGTATTGACAATGTCTCATCAGTTTGCTTGGGCGGAAGAGTCAACCCATGATCAAGAAGCTATACAACTGTCCATAGCAAGATAA 1827 41.65 MLGFVACISSAAVSSFVLCCRGHGWVNDERSPGQFSWEVKRIFMLKVLPSKHPWRVIMRWLLLLLMLRIGYSSEEPDVEGEALVDLLRALNDSNHKITDWNDNFVSPCFSWSHVTCRNGNVISLSLASIGFSGLLSPSITKLKYLSSLILKGNHLSGTIPDSITNLTGLVELDLSDSDLTGKIPEKLFFTGTRLICGSGFEKPCVSSTLHADRTKKMKLSVIVTSASGGAFIMFSIGVLFAYGYCYIHKHREEMFVDVAGEDDSKISFGQVRRFSWRELQLATDNYREANVIGQGGFGKVYKGVLSNNTEVAIKRMIDFNSPGGEAAFLREVQLISVAVHKNLLRLIGFCTTSTERILVYPFMKNLSVAYCLRDLKPGEKGLDWPTRKRIAFGAAHGLVYLHEDCNPKIIHRDLKAANILLDDDFEAVLGDFGLAKLVDTNLTQITTQVRGTMGHIAPEYLCTGKSSEKADVFGYGITLLELVTGQRAIDLSRLEEEEDVLLLDHIKKLLREKRLDDIVDKSLKSYDAEEVEAMIQVALLCTHSLPEHRPVMREVVSLLERVNLAERWGEWMVLEETRDQQVLTMSHQFAWAEESTHDQEAIQLSIAR 608
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 15187026 15203844 - Bpe001301.1 Bpe15g00364 116043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00364 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 409 421 IPR008271 GO:0004672|GO:0006468
Bpe15g00364 608 PANTHER LRR RECEPTOR-LIKE KINASE 56 186 - -
Bpe15g00364 608 ProSitePatterns Protein kinases ATP-binding region signature. 292 314 IPR017441 GO:0005524
Bpe15g00364 608 PANTHER LRR RECEPTOR-LIKE KINASE 189 608 - -
Bpe15g00364 608 Gene3D Phosphorylase Kinase; domain 1 255 362 - -
Bpe15g00364 608 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 189 608 - -
Bpe15g00364 608 Gene3D Ribonuclease Inhibitor 78 193 IPR032675 -
Bpe15g00364 608 SUPERFAMILY Protein kinase-like (PK-like) 265 560 IPR011009 -
Bpe15g00364 608 SUPERFAMILY L domain-like 80 186 - -
Bpe15g00364 608 ProSiteProfiles Protein kinase domain profile. 286 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe15g00364 608 Gene3D Transferase(Phosphotransferase) domain 1 363 578 - -
Bpe15g00364 608 Pfam Leucine rich repeat N-terminal domain 78 116 IPR013210 -
Bpe15g00364 608 SMART serkin_6 286 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe15g00364 608 Pfam Protein kinase domain 286 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe15g00364 608 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 56 186 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g00502 Bpe-Chr13:12415241 Bpe15g00364 Bpe-Chr15:15187026 1.53E-130 dispersed
Bpe14g01062 Bpe-Chr14:7945411 Bpe15g00364 Bpe-Chr15:15187026 0 dispersed
Bpe15g00364 Bpe-Chr15:15187026 Bpe07g00054 Bpe-Chr7:448664 3.65E-79 dispersed
Bpe15g00442 Bpe-Chr15:15880815 Bpe15g00364 Bpe-Chr15:15187026 6.93E-151 dispersed
Bpe15g00364 Bpe-Chr15:15187026 Bpe13g01475 Bpe-Chr13:19998380 1.56E-135 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63760 PF00069 Pkinase 2.90E-41 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00364 - - bhj:120088289 796.964