Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00386 GAAAGAAGAGAGAGAGGGAGGGAGATGGCGTCCATGTCCAACCTTGGCTTGTTCGAGACCCAAGATGCAGCTACACACACGGCTTGCTTTTCTTTTCCTCCAAATGCACCGTTTTCTTCGATGGGTTTTCATCAATCTCTCAAACCCTTACCTAATAATATTATATCTTCTTCTGAAACCCTAATTTCATCGGCCACGCTTGATCTGATCAAGCATAGAGAAGAAGAAAACTCGTTTGGATTTGGAGGAGCAGAACTGCTTCCTTTACGAAAATCAACCGCAAATCATTTCTGGGCATTTGGAGAGGTGGGTGAATGTTTAAACGGGAAAAGAAATGGAGGGGGCGATCATAATCTAGGCATAAATTCGATGAAGATGAAGAAGATAAAGGTGAGGAGGAAGGTGAGAGAGCCTAGGTTTTGTTTCAAGACCATGAGCGACGTAGATGTGCTTGATGATGGTTACAAATGGAGGAAATACGGACAAAAAGTGGTAAAGAACACACAACATCCCAGGAGCTACTACCGATGCACTCAGGACAACTGTCGGGTAAAAAAGCGGGTGGAGCGACTGGCCGAAGACCCGAGAATGGTGATCACGACATACGAGGGGCGACACCCCCATTCTCCGTCTCAAGAATTGGAAGATTCACAAGCTCCTTCTCATATGAACACTTTCTTATGGTAG 687 45.27 ERRERGREMASMSNLGLFETQDAATHTACFSFPPNAPFSSMGFHQSLKPLPNNIISSSETLISSATLDLIKHREEENSFGFGGAELLPLRKSTANHFWAFGEVGECLNGKRNGGGDHNLGINSMKMKKIKVRRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHPHSPSQELEDSQAPSHMNTFLW 228
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 15387358 15388879 + Bpe001323.1 Bpe15g00386 116065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00386 228 MobiDBLite consensus disorder prediction 213 228 - -
Bpe15g00386 228 SUPERFAMILY WRKY DNA-binding domain 143 210 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe15g00386 228 Gene3D WRKY domain 138 204 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe15g00386 228 Pfam WRKY DNA -binding domain 152 208 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe15g00386 228 MobiDBLite consensus disorder prediction 202 228 - -
Bpe15g00386 228 PANTHER WRKY TRANSCRIPTION FACTOR 13-RELATED 52 222 - -
Bpe15g00386 228 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 52 222 IPR044810 GO:0003700
Bpe15g00386 228 ProSiteProfiles WRKY domain profile. 146 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe15g00386 228 SMART WRKY_cls 151 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g00796 Bpe-Chr13:14336961 Bpe15g00386 Bpe-Chr15:15387358 5.30E-49 dispersed
Bpe15g00138 Bpe-Chr15:11523615 Bpe15g00386 Bpe-Chr15:15387358 4.65E-32 dispersed
Bpe15g00386 Bpe-Chr15:15387358 Bpe03g00493 Bpe-Chr3:24696111 5.47E-32 dispersed
Bpe15g00386 Bpe-Chr15:15387358 Bpe14g01092 Bpe-Chr14:8150578 1.11E-32 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22565 PF03106 WRKY 8.20E-25 CL0274 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00386 - - vvi:100247547 276.559