Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00391 ATGGATACGGGCGGTCGACTCATTGCTGGCTCTCACAATCGGAACGAGTTTGTTCTTATCAATGCTGAAGAAAATGGACGAATCACGTCTGTGAAAGAGCTGAGTGGCCAAGTGTGCCACATTTGCGGGGATGAGATAGAAATTGCGTTCGATGGAGAGCCTTTTGTCGCCTGTAATGAATGTGCTTTTCCCGTGTGTCGACCTTGCTACGAGTACGAGAGGAGAGAAGGAAATCAAGCTTGCCCTCAGTGTAAAACTAGATATAAACGCATCAAAGGCAAGGCTTTTTCCTTTCCTTTTCAGAATTCTTATTCTCTGAGGGTTGAGGGTGATGAGGAAGAAGACGGCATTGATGATTTGGACAATGAATTTGACTATGAGATGATGGGTTCACAACACGGGTCAGAAGCTTTGTATAGTTCTCGCTACAACACAGTTCGTAGTTCATCTGGAATTCCCTTACATGTGGAAAACAAATCTTCGACTGCCCCAACCGAAATCCCTATGCTTACCTATGGTGAGGAGGATTCGGATATATCTACCGATCAACATGCTCTTATTGTACCTCCCTTTATTGATAACGGAAATAGAGTTCACTTTATGTCTTCTTCCGACCGTTCCTTACCTTTGCAATCCAGACCTATGGTTCCGAAAAAAGATATTGCAGTTTATGGGTATGGGAGTGTGGCATGGAAGGATCGAATGGACGAGTGGAAGAGAAGGCAAAATGATAAACTTCAGGTGGTTAGGCACCATGATGAAAATGATCTCGATGATTCTGATATCCCCATGATGGATGAGGGAAGGCAGCCATTATCACGGAAATTACCTATCTCTTCGAGCAAAATAAATCCTTATCGATTAATTATAATTCTTCGACTTGTTATCATTAGCTTCTTTTTCCATTATCGACTGCGTCATCCGGTCCGTGATGCTTATGGCTTGTGGTTGACATCTGTTATATGTGAAATTTGGTTTGCTGTGTCGTGGATTCTAGACCAGTTTCCCAAATGGTACCCTATTCAACGAGAAACATATCTCGATCGCTTATCACTGAGGTATGAAAAAGAAGGGCAGCCTTCAGAGTTAGCCAATGTAGACATCTTTGTTAGTACAGTCGATCCGACGAAGGAACCTCCATTAATTACTGCAAACACGGTTCTTTCCATCCTAGCTGTTGATTATCCGGTGGAGAAAGTCGCGTGCTATGTCTCAGACGATGGAGCAGCGATGTTAACGTTCGAAGCTTTGTCTGAGACGTCGGAATTTGCTAGAAAGTGGGTTCCATTTTGTAAGAAGTTCAATATCGAGCCTCGGGCCCCGGAGTGGTATTTTTGTCAAAAGATTGATTACTTGAAAAACAAAGTCCATCCCGCCTTTGTGAGGGAAAGGCGTGCAATAAAGAGAGAATACGAAGAATTTAAAGTCAGGATAAATGGACTTGTAGGGATGGCACAAAAAGTCCCCGAGGAAGGCTGGACGATGCAGGATGGAACTCCATGGCCAGGGAACCTTGTCCGGGACCATCCCGGCATGATTCAGGTCTTTCTCGGTGAAAATGGAGTTCGTGATTGTGATGGGAATGAGCTACCTAGGTTGGTTTATGTTTCTCGTGAAAAGAGACTAGGGTTCGAGCACCACAAAAAGGCCGGGGCTATGAATGCTCTGGTGCGAGTTTCGGCTGTTCTTTCAAATGCACCTTATCTTCTGAATGTGGACTGCGATCACTATATCAATAACAGCAAGGCTATCCGAGAAGCTATGTGTTTCATGATGGACCCTCAGTCAGGGAAGAAAGTTTGCTATGTGCAGTTCCCTCAAAGGTTCGACGGGATTGATCGGCACGATAGATACTCAAATCGGAATGTTGTGTTTTTCGACATCAACATGAAAGGATTGGATGGCATACAAGGGCCGATTTACGTTGGAACAGGGTGCGTCTTTCGAAGACAAGCGCTATATGGATATGATGCTCCGGTGAAGGAGAAGCCTCCTAGCAAAACATGCAATTGTTTGCCAAAATGGTGTTGTCTTTGCCGTGGATCTAGAAAGAGCAAGATAGGAAGAAATAAAAACGAGAAAAAGAAGATGAAGCAGAGAGAAGCTTCGAAACAAATACATGCACTTGAAAAGATCGAAGAGGAAATCGAAGGCAAGGACGCAGTTTCTAGATCTTCTCCTGCCGAAACAACCCAGATAAAATTACGGAAGAAGTTTGGTCAATCTCCCCTTTTTGCTGCTTCGACATTATTGGAAAACGGCGGAGTTTGTCACAAGATCAGCCCGGCATCACTCTTGAGCGAAGCCATTCAAGTGATCAGTTGTGGTTATGAAGATAAGACCGAATGGGGAAAAGAGGTTGGCTGGATTTACGGCTCGGTGACTGAGGATATTCTGACTGGTTTTAAGATGCACTGCCATGGATGGCGATCGGTGTATTGCATACCTTGTCGACCTGCTTTCAAAGGGTCGGCTCCTATTAACCTCTCTGATCGTTTGCACCAAGTTCTTCGGTGGGCCCTCGGCTCTGTCGAGATTTTCTTGAGCAAGCACTGTCCGATTTGGTACGGCTATGGAGGTGGTTTAAAATGGTTGGAGCGATTCTCGTATATAAATTCAGTCGTTTATCCTTGGACCTCCATCCCCTTGCTCGTCTATTGCAGCCTTCCAGCCATCTGTCTCCTAACCGGAAAATTTATAGTTCCCGAGATCAGCAACTATGCGAGTCTAATCTTCATAGGACTATTCGTATCCATAGCTGCAACTGGAATCCTCGAAATGCAATGGGGTGGGGTTGGAATCGATGACTGGTGGAGAAATGAGCAGTTTTGGGTGATCGGAGGCGTGTCCTCCCACCTCTTCGCTCTATTTCAGGGCCTCCTCAAAGTTTTGGCCGGAGTCAGCACAAATTTCACTGTCACCTCCAAAGCAGCTGACGACGGACAATTCTCGGAGCTCTACATATTCAAATGGACGTCTCTTCTGATCCCGCCCACGACCCTGCTCATCATGAACATCATCGGTGTGGTGGTTGGAATCTCCGACGCCATAAACAATGGCTACAACTCGTGGGGCCCACTTTTCGGAAGACTGTTCTTTGCATTCTGGGTCATAATCCACCTCTACCCCTTCCTCAAGGGATTGCTAGGTAGACAAGATAGATTGCCAACAATCATTGTTGTTTGGTCAATTTTACTGGCCTCAATTTTGACTCTTATGTGGGTGAGAATCAACCCATTTGTGTCAAAAGATGGCCCTGTTTTAGAAGTCTGTGGGTTGAACTGTGATGATGTTTGA 3297 45.19 MDTGGRLIAGSHNRNEFVLINAEENGRITSVKELSGQVCHICGDEIEIAFDGEPFVACNECAFPVCRPCYEYERREGNQACPQCKTRYKRIKGKAFSFPFQNSYSLRVEGDEEEDGIDDLDNEFDYEMMGSQHGSEALYSSRYNTVRSSSGIPLHVENKSSTAPTEIPMLTYGEEDSDISTDQHALIVPPFIDNGNRVHFMSSSDRSLPLQSRPMVPKKDIAVYGYGSVAWKDRMDEWKRRQNDKLQVVRHHDENDLDDSDIPMMDEGRQPLSRKLPISSSKINPYRLIIILRLVIISFFFHYRLRHPVRDAYGLWLTSVICEIWFAVSWILDQFPKWYPIQRETYLDRLSLRYEKEGQPSELANVDIFVSTVDPTKEPPLITANTVLSILAVDYPVEKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFNIEPRAPEWYFCQKIDYLKNKVHPAFVRERRAIKREYEEFKVRINGLVGMAQKVPEEGWTMQDGTPWPGNLVRDHPGMIQVFLGENGVRDCDGNELPRLVYVSREKRLGFEHHKKAGAMNALVRVSAVLSNAPYLLNVDCDHYINNSKAIREAMCFMMDPQSGKKVCYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKEKPPSKTCNCLPKWCCLCRGSRKSKIGRNKNEKKKMKQREASKQIHALEKIEEEIEGKDAVSRSSPAETTQIKLRKKFGQSPLFAASTLLENGGVCHKISPASLLSEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMHCHGWRSVYCIPCRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSKHCPIWYGYGGGLKWLERFSYINSVVYPWTSIPLLVYCSLPAICLLTGKFIVPEISNYASLIFIGLFVSIAATGILEMQWGGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVLAGVSTNFTVTSKAADDGQFSELYIFKWTSLLIPPTTLLIMNIIGVVVGISDAINNGYNSWGPLFGRLFFAFWVIIHLYPFLKGLLGRQDRLPTIIVVWSILLASILTLMWVRINPFVSKDGPVLEVCGLNCDDV 1098
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 15437699 15443012 - Bpe001328.1 Bpe15g00391 116070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00391 1098 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 1095 - -
Bpe15g00391 1098 Pfam Zinc-binding RING-finger 30 116 IPR027934 -
Bpe15g00391 1098 Coils Coil 695 715 - -
Bpe15g00391 1098 CDD mRING-HC-C4C4_CesA_plant 37 87 - -
Bpe15g00391 1098 SUPERFAMILY RING/U-box 25 118 - -
Bpe15g00391 1098 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 9 [UDP-FORMING]-RELATED 1 1095 - -
Bpe15g00391 1098 ProSiteProfiles Zinc finger RING-type profile. 39 85 IPR001841 -
Bpe15g00391 1098 SUPERFAMILY Nucleotide-diphospho-sugar transferases 375 908 IPR029044 -
Bpe15g00391 1098 Pfam Cellulose synthase 366 1084 IPR005150 GO:0016020|GO:0016760|GO:0030244
Bpe15g00391 1098 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 123 IPR013083 -
Bpe15g00391 1098 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 520 658 IPR029044 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00278 Bpe-Chr2:1866590 Bpe15g00391 Bpe-Chr15:15437699 7.28E-39 dispersed
Bpe04g00361 Bpe-Chr4:2272864 Bpe15g00391 Bpe-Chr15:15437699 3.29E-06 dispersed
Bpe13g01174 Bpe-Chr13:17147738 Bpe15g00391 Bpe-Chr15:15437699 0 dispersed
Bpe15g00391 Bpe-Chr15:15437699 Bpe04g01219 Bpe-Chr4:17342647 0 dispersed
Bpe15g00391 Bpe-Chr15:15437699 Bpe04g00051 Bpe-Chr4:446891 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00391 K10999 - tcc:18611727 1929.07