Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00397 GCTCTCTCCGAAATGCCCCAAGATAATGCCGAGTTGAACGCGGCAAAGCGCGGGTACAGGAACGCCAAAGCCGAAGGCAACCATCAGGAGGAAGCCAGATGGGCTAACGTGATCGGCAATAATTTGAAGAATCGGGGTCAGTATGTGGAGGCTCTCAAATGGCTCCGCATTGATTATGAAGTTACGGTCAAGTATTTGCCTGAGAAGCACTTACTCCCTTCGTGTCAGTCTCTTGGCGAGGTCTATCTCAGACTTGAGTACTACAAGGATGCTCTGATTTATCAGAAAAAGCACCTAGAGCTAGCTAAAGACGCTGATGATCTTGTTGAGCAACAAAGAGCTAGTACTCAACTAGGTCGTACTTACCATGAGATGTTCTCAAGATCTGAGGATGATCATTGCTCAGTTCGCAATGCCAAAAAGTATTTTAAGTCTGCCATGAAGCTTGCAAAAACTTTAAAAGAGAACCCTGGAAGTAGCAAATGTTCCTTTCTTAAGGAATATATTGATGCTCATAATAATTTAGGAATGCTTGAAATAGATCTTGATAACTTGGTGGAAGCCCATAAAATACTGATGAAAGGATTGGAAATTTGTGATGAGGAAGAGGTGATTGAAAATGATGATGGTCGCAGCAGGCTCCATCACAACCTTGGAAATGTATACTTGGTGATGAGGATGTGGGATGAAGCTCGGAAACACATTGAGAAAGATGTCATAATTTGTAATAAAATCGGACACTGCGAAGGGGAGGCAAAGGGATATATAAACCTTGGTGAGCTGTATTATAGGGTTCAAAAGTATGATGATGCACTTTTATGCTATCATAAGGCGCTTGATCTAGCAAAATCCATGGAAGATGAGGATGCCTTAGCGAGGCAAGTTGAGGAAAATATTGAAACTTCGAAGGAAGCTATGAAAGTAATGGCTGAGTTGAAGAAAGAAGAGCAAAATCTAAAGAAATTAGTGAGAGATATTGCTATTGCAAGAGGCACATCTTGTGAGAGGAAGTGTTTGCTGCAGCAGCTTGATTCACTAGATTGTCTCATTGAGAAAGCACGGTTGATTTTTGCTTGGACGAAGAATCTTGAGTTTGCAAAAAGAAAGAAGAGAGTAGCCAGTGAACTATGTGACAAGGAAAAGCTGAGTGATTCATTTCTGGTTATCGGCGAGACGTATCAGAAGCTTAGGAAGTTTGAAAAAGCCTTTAAATGGCATTCAAAGAGTTGGGAAATGTACAAGTCAATCGGTAACTTGGAAGGACAGGCAATGGCAAAGATCAATATCGGTAACGTTTTGGACTATGATGGCAAGTGGAAAGAAGCTCTAAATGCGTTTGAAGAGAGCTACAGAATTGCTATTGAAGCAAACCTTCCTGCTGTGCAGCTCTCAGCACTCGAAAATATGCACTATTGTCAGATGATACGATTTGACAATATTGATGAGGCAAGGAGGTTGCTGGCTGTAATTGATCACTTGAAGCAGTCAAACAAAGGAGATCTTGAAACCCAAAAGGTTTTAGAAGACTGCTGCTCTGAAACTGATTCAGAAGCAAATGAACGATTGTCTGTAACGCCAGAGGCATCTTGCTCGAGTATGATGACAAATGCCAGTGACCGTCGATCACATTCTAAAGAGGGTATGGCAGAATCAGACGATGATATAACGCTAATTTCACTACTCAGGTCCCGGGGAACCCGAATGAAAGCTTCTCATAGAAATAAGCAAAGAGTTTCTGAAAGTCCAATTCAAGTGTCTCCTAAAACTTTGTCCAAATCAGCCAGTAATCAGCAAAAATTTGTTGGTCGTAAAAGAGTTCGCGTTATCCTTTCTGATGATGAAGGTGAAATGCTTAATGAGTTGGAGTTGTCAAAAGAAAGACACCCAATAATGCCAAGTGAGAATGATTTTGCAGCTGCGGCCGATGATGGTGCTGGAAGGTCTGGTGAGTGTGTGGAAGAAAGTACTAGTTCATACAAATGCAAGAGTGATAACAAAACCTTTCAAGATGATGAAGCTTTTAGATCAAGTTCTAATCAAGGCTTGGCATCTGAGACTGCCGCTAGTGGCTCCAAACGTGAAATAGACATCTTCAAAAACTTGTTGCATACATATGATGCTGATCATCTGAAATTGCATAATTCTGATGATGAGGGCCAGCGTGTTGCTTTCAAGATTGATAACATCCTGTTACAAGTTGAAGTAGGCTCCTTCTTGGTTGGTGATAAGTTGGACACGGAATCATTGAAGGATGAATTAGCATGCTTATACTATCTACAACTTCCCAAGGAAAAGAAGTTGGAAGGTCTTTTGCCTGTTATTGGAAGTGTTAGTTGTGATGTAAGAGTTATGAAGTCACTAGAAACGAATAAGAATCCCAAGGAAGATGGGGTAAACACCTTGGTTGAAGCTGTCATTCATGGATGGGTTTCGAAACCTTTGATTAAATTGTATATAAACTACTGCAAAGAGTTGTCTGAGGCACCAAACATGAAGTTACTGAAGAAACTTTATAATTTAGAGTGTTCAGATGATGAAATTACTGTATCAGAATGTGATTTGCAAGATTTGTCTATTAGTCCCCTGGTAAATGCACTGCACGTTCACAAAACATTTGCTGTGCTTGATCTTTCTCACAACCTTTTAGGAAACGGAACTGCAGAAAAAATTCAACGGGTATTTACACTTTCAGGACAATCAAATGACTTAACTTTGGATTTACATTGCAATCGATTTGGTCCGACCACTCTATATCAGATTTGTGAATGTCCTGTACTATTCACTCGGCTGCAAGTTCTCAACATATCTGGAAATCGCCTCACTGATGCCTGTGGAACTTATCTCTCAACCATATTAAAAAATTGTAAAGGCCTTTGGAGTTTGAATATAGAACGCTGCTCTATCACGTCTAGAACAATTCAGAAGGTCGCTGATGCCTTGCACACTGAATCCACACTGGAACAACTTTGTTTAGGATACAATAACCCTATATCTCAAAATGTCCTTATGAATTTGCTCATCAAGCTTGAAACTGTGAATAGACTTACAAAATTGAATCTGAACGGTTTGAAGCTAAACAAGCCTGTCATTGACAGTCTAATCCATCTTGTAAAGGTCCCACGTTTTTCTGGACTAATGGTTGGAGACACTGGTGTTGGAACTGATGGAGCATTACAGTTAACTGAGGCTTTGTTCAATGGCAGTGATGAGTTTGTTAAACTTGATGTATCTTGTTGTGGGCTAACGCCTACATACTTTCTAAAACTCAACAATGTCTCTCAGATTCATCGCATTCATGAGCTAAACCTTGCTGGCAACTCTTTAATTACACAGGGTTGTAATGCGGTAACATCATTGCTGACAAACGCACATTGTTGGCTTAAAATATTAATCCTTAACAACTGTCGGCTTGGACATGATGGAGTTCTGCAAGTAATTCAGGCATTACAAGAAAATTGTCATCTTGAAGAACTCAATCTCGCCAATAACATAAATCTGGACGAGCAAGAACTCATTCCATTTAACTTCACAGCAAAACAGAAATTTGAACCCTCAGACTCAAGCCTCAAAGAACCATCATCAACACCCTGTTTGGCCATGGAGATTGAGACTGTTCAACACGATTTAGGCATCGCCAACTACAATGAGCTTGAAGTTGCTGATAGTGAAGATGGCCCCAATGGGATCGAAGCTGCATCTGGAGTTGACAATAGTTGTGTGAGTTCATGTTATAGGAACCCATCATCTCTAAAAATCAACTTTTTTATGGAGCTCTTAGGAGCCATCAAACTGGCAAATACACTGCAGTTATTGGATCTTAGCAACAACGGTTTCTCTGCACAAAATGCAGAAAATTTGTTCAACGCATGGTCCAACTCGAGGGCTGGTATAGCCGTTAGCCATATCAAGGACAAGACGATTCATTTGTCGGTGAAAGGAGTAAAATGCTGTGTGAGACCCTGCTGCAGAAAGGAATAG 3978 40.57 ALSEMPQDNAELNAAKRGYRNAKAEGNHQEEARWANVIGNNLKNRGQYVEALKWLRIDYEVTVKYLPEKHLLPSCQSLGEVYLRLEYYKDALIYQKKHLELAKDADDLVEQQRASTQLGRTYHEMFSRSEDDHCSVRNAKKYFKSAMKLAKTLKENPGSSKCSFLKEYIDAHNNLGMLEIDLDNLVEAHKILMKGLEICDEEEVIENDDGRSRLHHNLGNVYLVMRMWDEARKHIEKDVIICNKIGHCEGEAKGYINLGELYYRVQKYDDALLCYHKALDLAKSMEDEDALARQVEENIETSKEAMKVMAELKKEEQNLKKLVRDIAIARGTSCERKCLLQQLDSLDCLIEKARLIFAWTKNLEFAKRKKRVASELCDKEKLSDSFLVIGETYQKLRKFEKAFKWHSKSWEMYKSIGNLEGQAMAKINIGNVLDYDGKWKEALNAFEESYRIAIEANLPAVQLSALENMHYCQMIRFDNIDEARRLLAVIDHLKQSNKGDLETQKVLEDCCSETDSEANERLSVTPEASCSSMMTNASDRRSHSKEGMAESDDDITLISLLRSRGTRMKASHRNKQRVSESPIQVSPKTLSKSASNQQKFVGRKRVRVILSDDEGEMLNELELSKERHPIMPSENDFAAAADDGAGRSGECVEESTSSYKCKSDNKTFQDDEAFRSSSNQGLASETAASGSKREIDIFKNLLHTYDADHLKLHNSDDEGQRVAFKIDNILLQVEVGSFLVGDKLDTESLKDELACLYYLQLPKEKKLEGLLPVIGSVSCDVRVMKSLETNKNPKEDGVNTLVEAVIHGWVSKPLIKLYINYCKELSEAPNMKLLKKLYNLECSDDEITVSECDLQDLSISPLVNALHVHKTFAVLDLSHNLLGNGTAEKIQRVFTLSGQSNDLTLDLHCNRFGPTTLYQICECPVLFTRLQVLNISGNRLTDACGTYLSTILKNCKGLWSLNIERCSITSRTIQKVADALHTESTLEQLCLGYNNPISQNVLMNLLIKLETVNRLTKLNLNGLKLNKPVIDSLIHLVKVPRFSGLMVGDTGVGTDGALQLTEALFNGSDEFVKLDVSCCGLTPTYFLKLNNVSQIHRIHELNLAGNSLITQGCNAVTSLLTNAHCWLKILILNNCRLGHDGVLQVIQALQENCHLEELNLANNINLDEQELIPFNFTAKQKFEPSDSSLKEPSSTPCLAMEIETVQHDLGIANYNELEVADSEDGPNGIEAASGVDNSCVSSCYRNPSSLKINFFMELLGAIKLANTLQLLDLSNNGFSAQNAENLFNAWSNSRAGIAVSHIKDKTIHLSVKGVKCCVRPCCRKE 1325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 15474664 15491541 + Bpe001334.1 Bpe15g00397 116076

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00397 1325 PANTHER PROTEIN TONSOKU 5 1324 IPR044227 GO:0005634|GO:0006325|GO:0009933|GO:0040029|GO:0072423
Bpe15g00397 1325 ProSiteProfiles TPR repeat region circular profile. 252 281 - -
Bpe15g00397 1325 SUPERFAMILY TPR-like 387 511 IPR011990 GO:0005515
Bpe15g00397 1325 SUPERFAMILY RNI-like 833 1292 - -
Bpe15g00397 1325 Gene3D Tetratricopeptide repeat domain 8 318 IPR011990 GO:0005515
Bpe15g00397 1325 Gene3D Tetratricopeptide repeat domain 344 487 IPR011990 GO:0005515
Bpe15g00397 1325 Gene3D Ribonuclease Inhibitor 781 1043 IPR032675 -
Bpe15g00397 1325 Gene3D Ribonuclease Inhibitor 1053 1310 IPR032675 -
Bpe15g00397 1325 MobiDBLite consensus disorder prediction 517 538 - -
Bpe15g00397 1325 MobiDBLite consensus disorder prediction 567 597 - -
Bpe15g00397 1325 Pfam Tetratricopeptide repeat 212 284 - -
Bpe15g00397 1325 Pfam Tetratricopeptide repeat 389 453 - -
Bpe15g00397 1325 SUPERFAMILY TPR-like 139 289 IPR011990 GO:0005515
Bpe15g00397 1325 SMART tpr_5 423 456 IPR019734 GO:0005515
Bpe15g00397 1325 SMART tpr_5 169 202 IPR019734 GO:0005515
Bpe15g00397 1325 SMART tpr_5 383 416 IPR019734 GO:0005515
Bpe15g00397 1325 SMART tpr_5 72 105 IPR019734 GO:0005515
Bpe15g00397 1325 SMART tpr_5 252 285 IPR019734 GO:0005515
Bpe15g00397 1325 SMART tpr_5 212 245 IPR019734 GO:0005515
Bpe15g00397 1325 Coils Coil 285 332 - -
Bpe15g00397 1325 MobiDBLite consensus disorder prediction 517 551 - -
Bpe15g00397 1325 ProSiteProfiles TPR repeat profile. 252 285 IPR019734 GO:0005515
Bpe15g00397 1325 MobiDBLite consensus disorder prediction 577 597 - -
Bpe15g00397 1325 SMART LRR_RI_2 927 954 - -
Bpe15g00397 1325 SMART LRR_RI_2 1124 1151 - -
Bpe15g00397 1325 SMART LRR_RI_2 869 896 - -
Bpe15g00397 1325 SMART LRR_RI_2 1095 1122 - -
Bpe15g00397 1325 SUPERFAMILY TPR-like 24 202 IPR011990 GO:0005515
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00397 - - - bhj:120073724 1585.47
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g1265 Blo04g00969 . . . Bpe15g00397 . . . . . Cma03g01081 . Car03g00971 . Sed10g0490 . Cpe10g00348 Bhi03g01379 Tan03g1329 Cmetu08g0165 . Hepe04g1126 . . Cla01g01530 Cam01g1598 Cec04g1243 Cco04g1312 Clacu01g1623 Cmu01g1509 Cre04g1188 . . . . Lsi01g01135 . . Cme08g01069 . . . Bda14g01059 . . Bma03g01034 . . Cmo03g01070 . . . . . . . . . . . . . . . . . . . . . . Csa06g02797 Chy02g01038 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011042 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 3 1 31
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe15g00397 Bpe_Chr15 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0