Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00401 ATGGCAACCCGATTTCCCGATAGATGCGAATCCTCCCTCTCTGAATCGAGTGCCACTGCTCCAAACGCGAACGCAATCGAAATCATTCAATCTGCCACCCGGGTGTCGCTAGAAAATCTGAAGACGGCGCAATCAATGGTGGAGGACATTCTAGATGCGTCGGTGGGGAATATGAACCGCACAACCGCCGCGAGAATCTGCCTGGAGGTGCTCCGGAACTCGAACTACCGCATTTCATCTACAATTGATCGGCTGCCATGCAGTCGAATCAAAGACTGCCGGGCGTGGATGAGCGCCGGTCTTCTCTTCCAGTACGATTGCTGGTCGGCGCTCAAATACGCAAATGATACCCAAATGGTAAATAAAACGATGTCGTTTTTAAACTCCTTAATTGATCTGTCTAGCAACGCGCTAAGCATGATGGCCGCTTACGATGTTTTCGGGAACCATACTGGGTCTTGGGGCCCGCCCAAGACCGAGAGAGAGGGTTTTTGGGAGGGAGTCGCGCCGGGTTCGAGCGGCGCGCCCAGTTTGGGATTTGCCGGTGGGTTTCCGTCTGAGCTGACAGCAGACGTGACAGTGTGCACGGATGGAAGTGACGGTTGTTACAAGACGGTGCAGGAAGCCGTTAATGTCGCGCCAGACAACGAGGCGGCACGGAGGTTCGTAATTCACATTAAAGAAGGCGTTTACGAAGAGATAGTCCGGGTGCCTTTGGAGAAGAAGAACGTCGTGTTTTTGGGAGACGGGATGGGCAAAACTGTTATTACGGGGTCATTAAAATCCGGCCAACCCGGTATTTCCACCTACAACTCGGCCACAGTCGGAGTTGCCGGTGATGGATTCATGGCTAGCGGTCTCACGATAGAAAACACGGCGGGGCCAGATGCTCACCAAGCCGTAGCTTTCCGATCAGATAGTGATCTCTCTGTTATTGAAAATGTTGAGTTTCTGGGCAACCAAGACACTCTCTATGCTCACTCTCTTCGTCAATTCTACAAATCATGTCGAATCCAAGGCAATGTCGATTTCATCTTTGGAAATTCCGCTTCCTTTTTTCAAGATTGCAGTATCTTAATAAGACCCCGCCAAATCAATCCTGAAAAGGGAGAAAACAATGCAATCACTGCTAACGGAAGAACTGATCCTGCGCAATCGACCGGCTTCGTGTTTCAAAATTGTGTGATCAACGGAACAGAAGATTACATGCGCTTGTATTATAACAAGCCTAAGGTGCACAAAAACTTCTTGGGAAGGCCTTGGAAAGAGTATTCCAGGACTGTCTTTCTGCATTGCAATCTCGAGGCTCTCATTACACCACAAGGATGGATGCCGTGGAGTGGTGATTTCGCTTTGAAAACTCTTTTCTACGGCGAGTTTGAGAATTTTGGAGCAGGATCAAATGTCTCTGATCGAGTGTCGTGGAGTAATCAAATATCAGCTTATCATGTTTCCACCTACTCAATTGAGAATTTCATTCAAGGGAATGAGTGGATTCCGCATTCTCGAACGGAGCGTCAACAAGGAATGGTCAAGAGAAATCCAAAAATTGAACTTCATTGA 1563 48.56 MATRFPDRCESSLSESSATAPNANAIEIIQSATRVSLENLKTAQSMVEDILDASVGNMNRTTAARICLEVLRNSNYRISSTIDRLPCSRIKDCRAWMSAGLLFQYDCWSALKYANDTQMVNKTMSFLNSLIDLSSNALSMMAAYDVFGNHTGSWGPPKTEREGFWEGVAPGSSGAPSLGFAGGFPSELTADVTVCTDGSDGCYKTVQEAVNVAPDNEAARRFVIHIKEGVYEEIVRVPLEKKNVVFLGDGMGKTVITGSLKSGQPGISTYNSATVGVAGDGFMASGLTIENTAGPDAHQAVAFRSDSDLSVIENVEFLGNQDTLYAHSLRQFYKSCRIQGNVDFIFGNSASFFQDCSILIRPRQINPEKGENNAITANGRTDPAQSTGFVFQNCVINGTEDYMRLYYNKPKVHKNFLGRPWKEYSRTVFLHCNLEALITPQGWMPWSGDFALKTLFYGEFENFGAGSNVSDRVSWSNQISAYHVSTYSIENFIQGNEWIPHSRTERQQGMVKRNPKIELH 520
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 15519019 15520680 - Bpe001338.1 Bpe15g00401 116080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00401 520 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 143 IPR035513 -
Bpe15g00401 520 SUPERFAMILY Pectin lyase-like 189 508 IPR011050 -
Bpe15g00401 520 SMART PMEI_2 1 140 IPR006501 GO:0004857
Bpe15g00401 520 CDD PMEI-like_3 2 145 - -
Bpe15g00401 520 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 3 141 IPR035513 -
Bpe15g00401 520 PANTHER PECTINESTERASE 2 502 - -
Bpe15g00401 520 Pfam Plant invertase/pectin methylesterase inhibitor 3 140 IPR006501 GO:0004857
Bpe15g00401 520 Gene3D - 185 510 IPR012334 -
Bpe15g00401 520 Pfam Pectinesterase 191 496 IPR000070 GO:0030599|GO:0042545
Bpe15g00401 520 PANTHER PECTINESTERASE 2 502 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe15g00401 Bpe-Chr15:15519019 Bpe14g00892 Bpe-Chr14:6662463 7.45E-108 dispersed
Bpe15g00401 Bpe-Chr15:15519019 Bpe13g01126 Bpe-Chr13:16828866 9.34E-92 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00401 - - csv:101221165 801.201