Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00402 ATGTTTGCTCTGCCATGGAAAGAGGTATCGAAGTTTCCATGGTTGCTAGAAATGACGAGTAGTTTTAGTAGAAGTGCTTCATTAAACAGGAATGCCTCTTTTAAACTGAGGGGTTTGAGCGTCGGAAGTCCGAGAATCAATCGCGGGAACGTGGTATCGCGCTTATGTATTTGGATTGTAGTGATTGGAACTCTAATTTCATTTCTCATAGCTCTAACTGCTTGTTATTTTTATTCACTTCCTAATCTTACTTTTTCTTTCCACGGTCATGGCTTATACAAATCTAATTCTTATGCAACTACCTGTGATGTCTATGACGGAAATTGGGTTGTGGATGAAAACTACCCATTGTACAATGCAGGAGAATGCCCTTTTGCAGAGAAAGGATTTGATTGTCTAAGTAATGGTAGAAGGGATGAGGATTATCTTAAATGGAGGTGGAAACCTATGAATTGTGATATTGGAAGGTTCAATGTACATCAAGTATTGGAAATGTTTAGAAACAAAAGGATTGTTTTCGTTGGAGATTCTATGAGTAGAACACAGTGGGAATCCCTTATTTGTCTTTTGATGAGTGGGGTGGAGGATAAGAGGAGTGTTTATGAAATAAATGGGAATCAAATTACTAAGCGGATAAGATTCTTGGGTGTTCGATTTAATTTATTTAATTTTACTGTCGAGTTCTATCGCTCTGTTTTTTTGGTGGAACATAATTGGACTCTGAAGAATCAACCGAGGAGAGTGAAATCAGCTCTCAAACTGGACAAGCTTGATAGTATTAGCAGTGAGTGGATCGATTCAAATGTTCTTATATTCAACTCTGGACACTGGTGGGTCCCTGGGAAGCTTTTTGACACAGGCTGCTATTTCCAGGTTGGAAATTCTGTAAATCTTGGAATGCCAATTCACACAGCTTTCAGAATAGCACTTGAGACCTGGGCATCGTGGGTGGAGCAAACAATTGACAGTAACAAAACACGTGTTTTCTTTCGAACCTTTGAGCCATCTCATTGGAGTGGCCACACTTATCGAACTTGCAATGTAACCAGTCAACCAGCAGCAAAAACTGGGGGAAAAGAGGAAAGCATATTTTCCAACATAATAATGGAGGTCGTAAAGAATATGACAGTTCCTACAAATGTTTTGGATATAACTCAGTTATCAGCTAAACGTACTGATGCACATGTTGGTAAATGGAGCGATAATCCAGCAATACCAGATTGTAGCCACTGGTGTCTGCCAGGAGTGCCTGATACGTGGAATGAAATTTTACTCTTTTTACTTTCCACTGACCATTTGCATCCTTCTTAA 1311 39.36 MFALPWKEVSKFPWLLEMTSSFSRSASLNRNASFKLRGLSVGSPRINRGNVVSRLCIWIVVIGTLISFLIALTACYFYSLPNLTFSFHGHGLYKSNSYATTCDVYDGNWVVDENYPLYNAGECPFAEKGFDCLSNGRRDEDYLKWRWKPMNCDIGRFNVHQVLEMFRNKRIVFVGDSMSRTQWESLICLLMSGVEDKRSVYEINGNQITKRIRFLGVRFNLFNFTVEFYRSVFLVEHNWTLKNQPRRVKSALKLDKLDSISSEWIDSNVLIFNSGHWWVPGKLFDTGCYFQVGNSVNLGMPIHTAFRIALETWASWVEQTIDSNKTRVFFRTFEPSHWSGHTYRTCNVTSQPAAKTGGKEESIFSNIIMEVVKNMTVPTNVLDITQLSAKRTDAHVGKWSDNPAIPDCSHWCLPGVPDTWNEILLFLLSTDHLHPS 436
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 15527691 15530800 + Bpe001340.1 Bpe15g00402 116081

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00402 436 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 45 430 IPR029962 GO:0016413
Bpe15g00402 436 PANTHER PROTEIN TRICHOME BEREFRINGENCE-LIKE 7 45 430 - -
Bpe15g00402 436 Pfam PMR5 N terminal Domain 101 153 IPR025846 -
Bpe15g00402 436 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 155 425 IPR026057 GO:0016740
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00402 - - - rcu:8259144 595.504
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00749 Bpe-Chr5:20907746 Bpe15g00402 Bpe-Chr15:15527691 1.67E-94 dispersed
Bpe06g00050 Bpe-Chr6:599020 Bpe15g00402 Bpe-Chr15:15527691 1.05E-126 dispersed
Bpe15g00402 Bpe-Chr15:15527691 Bpe02g02062 Bpe-Chr2:22142743 4.52E-83 dispersed
Bpe15g00402 Bpe-Chr15:15527691 Bpe04g01451 Bpe-Chr4:21145536 1.65E-73 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g1281 Blo04g00965 . . . Bpe15g00402 . . . Cmo02g00629 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bda14g01054 . . Bma03g01030 . . . . . . . . Cpe05g01063 . Bhi10g01666 . . . . . . Cla02g00060 Cam02g0061 Cec02g0063 Cco02g0056 Clacu02g0060 Cmu02g0059 Cre02g0399 Lsi10g00720 . . Cme11g00064
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010327 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 32
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe15g00402 Bpe_Chr15 FPKM 3.383838 0.0 4.900077 0.0 2.696385 0.0 0.0 0.0 4.218525 0.0