Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00416 ATGTCGAAGACGTCTTTGATGACGCCAACAGAGCGGTACGCGGCGGGAGCATTGTTCGCGCTCGCCCTTCACCAGGCTCAGATCCACCAAACTCGTCCTCTTGGATTCTCAGCCGATGATGATCTCTCCGATGAGCGAACCAGTTGTAGCAGCAGCAGCAGTGACTCGGTTTCGGGTGACCCCGAGCTTTGGGTTAACGAAAGTTCTGGCCTTCTCCGTCCAGTTTTCAGGTTCTTTGAAATAAGCTCGGTGGCGTGGTCTGGACTTGAAGAAACGGCAGGGTCTCCTTCAGCTAAACATCATGTCGGAGCATTTTTGAGGCTGCTTTCTGAAGAAAATGGTGATAATTCTTCTCAAAGGTTAGATCAGGAGCTTGCCCTTTCAAAAGCAGTGGATGGCATGGTGTTAAGTATGGAAAAGGACCCTGAAGTATTCTTCTCAAAGAAAGAAAAACATCGTGAATATGAAAATGAACGCAGAGAAAAATGCCTCACTTCTGAGCAGCTCTCAAACACTGAATCAGTGGATAGGCATTCAGAAAATCAACCACTGTTGGATGATGGGAATTTTAACATTAACAGTGCTGTTGATGGGCCTATTGTTGAAAATGATGAACTACCTGTCGAAGAGGAAAGAATGCTCAGTTATCAGAGAAAAGTGACAATTTTGTATGAGCTGCTTTCAGCTTGTTTGGCAGATGCTCGTGGAGATGACAAAAAATGTTCCCGGAGAAGAACAGGGTATGATGCAAGACATCGTGTTGCTTTACGGTTGCTCTCAACTTGGCTTGATATTAAGTGGATAAAGATGGAAGCCATTGAGACGATAGTTGCTTGCTCTGCAATGGCTTTAGCAAAAAAGGAAGAAGGGAAGCACGAAGAAACTAGTGAGCAGGAAAACAAATGGGAGAGATGGAAGCGAGGTGGGATAATTGGTGCAGCTGCATTAACTGGAGGAACTCTGATGGCAATCACTGGCGGTTTAGCTGCCCCAGCAATTGCTGCTGGGTTTAGTGCCCTAGCTCCAACATTGGGCACCCTCATTCCTGTCATTGGAGCTAGTGGATTTGCAGCAGCTGCAAGTGCTGCAGGAACAGTTGCTGGTTCTGTTGCTGTTGCTGCATCTTTTGGTGCTGCTGGAGCGGGTCTCACAGGTAGCAAAATGGCTCGAAGAACAGGAAGTGTTGATGAATTTGAATTCAGATCCATTGGAGAGAACCATAATCAAGGGAGATTGGCAGTTGGGATTTTGGTCTCAGGTTTTGTGTTTGATGAGGATGACTTTATAAAACCATGGGAAGGGCTGAATGACAACTTGGAAAGGTATGCACTACAATGGGAGTCTCAGAATCTAATTGCAGTTAGCACTGCTATTCAGGATTGGCTTACTTCAAGAATCGCAATGGAGCTGATGAAGCAAGGTGCAATGTTGACTGTATTAAGCACTCTCTTGGCAGCACTTGCATGGCCTGCTACCTTACTAGCAATTACAGATTTTATAGATAGCAAATGGACAATTGCAGTGGACAGATCAGACAAGGCAGGAAAACTGCTTGCGGAGGTTCTGATGAAAGGCTTGCAGGGGAACAGGCCTGTAACACTTGTTGGTTTCTCACTTGGTGCACGTGTGGTTTTCAAGTGTCTTCAGTACTTGGCCAAGAGCGAAAAGAATGCTGGGATTGTGGAAAGAGTTGTCCTCCTTGGAGCACCAATTTCAATTAAAGATCAGAACTGGGGAGCTGCAAGAAAGATGGTGGCTGGAAGATTTGTGAATGCTTATTCTACAAACGATTGGATGCTTGGCGTTACCTTCCGTGCTAGTCTACTTACACAAGGATTAGCTGGAATCCAACCAATTGACGTCTGTGGCATTGAAAATATCGATGTAACCGATCTAATAGAAGGCCACTCTTCATATCTTTGGGCAACCCAACAAATCCTTGATCGGCTTGAACTGGATACCTATTATCCCGTTTTCAGGACCTTTCCAATTGCTATTGCAAACTAA 2007 45.39 MSKTSLMTPTERYAAGALFALALHQAQIHQTRPLGFSADDDLSDERTSCSSSSSDSVSGDPELWVNESSGLLRPVFRFFEISSVAWSGLEETAGSPSAKHHVGAFLRLLSEENGDNSSQRLDQELALSKAVDGMVLSMEKDPEVFFSKKEKHREYENERREKCLTSEQLSNTESVDRHSENQPLLDDGNFNINSAVDGPIVENDELPVEEERMLSYQRKVTILYELLSACLADARGDDKKCSRRRTGYDARHRVALRLLSTWLDIKWIKMEAIETIVACSAMALAKKEEGKHEETSEQENKWERWKRGGIIGAAALTGGTLMAITGGLAAPAIAAGFSALAPTLGTLIPVIGASGFAAAASAAGTVAGSVAVAASFGAAGAGLTGSKMARRTGSVDEFEFRSIGENHNQGRLAVGILVSGFVFDEDDFIKPWEGLNDNLERYALQWESQNLIAVSTAIQDWLTSRIAMELMKQGAMLTVLSTLLAALAWPATLLAITDFIDSKWTIAVDRSDKAGKLLAEVLMKGLQGNRPVTLVGFSLGARVVFKCLQYLAKSEKNAGIVERVVLLGAPISIKDQNWGAARKMVAGRFVNAYSTNDWMLGVTFRASLLTQGLAGIQPIDVCGIENIDVTDLIEGHSSYLWATQQILDRLELDTYYPVFRTFPIAIAN 668
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 15670568 15681470 + Bpe001354.3 Bpe15g00416 116095

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00416 668 PANTHER TRANSMEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 4 TMCO4 3 661 IPR007941 -
Bpe15g00416 668 SUPERFAMILY alpha/beta-Hydrolases 520 580 IPR029058 -
Bpe15g00416 668 MobiDBLite consensus disorder prediction 37 61 - -
Bpe15g00416 668 MobiDBLite consensus disorder prediction 47 61 - -
Bpe15g00416 668 MobiDBLite consensus disorder prediction 167 189 - -
Bpe15g00416 668 MobiDBLite consensus disorder prediction 156 191 - -
Bpe15g00416 668 Pfam Protein of unknown function (DUF726) 304 652 IPR007941 -
Bpe15g00416 668 PANTHER TRANSMEMBRANE/COILED-COIL PROTEIN (DUF726) 3 661 - -
Bpe15g00416 668 Gene3D alpha/beta hydrolase 458 652 IPR029058 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00416 - - - mnt:21409370 921.768
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g1038 . . . . Bpe15g00416 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Vvi4g1076 Blo04g00897 . . . Bpe15g00416 . . . . . . . . . . . . . . . . . . . . . . . . . . Cone8ag0836 Cone12ag0730 . . . . Chy07g01269 . . . . . . . Bma03g00972 . . . . . . . . . . . . . . . . . . . . . . . . . Csa04g00532 . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008264 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 2 3 1 35
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe15g00416 Bpe_Chr15 FPKM 46.535309 48.454704 34.077549 34.733799 54.022282 46.643623 50.59404 48.884556 53.055294 46.501339