Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00424 ATGAATGATCTAATGACAAAATCGTTCTTAAGTTATGTGGAATTGAAGAAACAAGCAGTGAAAGACATGGAAGCCGATCCCGACATAGAAACAGTCCAACTCAATCCTGCAGTTGAACATAATCTCTCCAAGTTCTTTCAAGAAGCGGGCCAAGTCAAAACTGAAATGGAAGAGATCAGCAATCTCTTGATCGAACTTCAAACACTCAATGAGGAGGCGAAGTCCATTTTCAGCGCCAAGATTCTTGGTGGGCTAAGAGATCGAATGGATTCAAACGTGGTTTCAATCCTTCGCAAAGCAAAGACGGCAAAGTCTAGGCTGGAAGCGCTCGATCGATCAAACGAAAAAAATCGAAGAAATTCAGAAGCTTTTAAAGAAAGCAGTCATGTTGACAGAACTAGGATTTCTGTCACTAACGGTTTAAGAGTCAAGCTGAGAGAATTGATGAATGATTTTCAGTTCTTGAGAGAGAAAATTCTACGTGATCATAAGGAAGACCTAAGGAGGACGTACTACACTGCAACAGGCGAGCAACTGAGTGAGGAAGTGATTGAGAAAATAGTCACGGGGGGCGAGAGAATTGACTTATTTCAAGGTAATAAAGCCAAGCACCAGGCTGTTTTAGAGGTTCAGAGAAGCTTGAGCAAGCTTCATCAGGTTTTTCTCGACATGGGTGCGCTTGTTGAGACGCAGGGAGAAAAAATGAATGATATTGAGGAGAATGTAGCTAATGCAAGAGGCTTCATCAATGGCGGAACTAATAGTCTTTACTATGCCAATCAGACTAAGAAAAACAAGAAATGGGCGTACTGGGTTGCAGCTGTTGTACTGATCATAGTGCTGGTTTGCTTCATTGCTACACTAGTTTCTTGA 873 41.81 MNDLMTKSFLSYVELKKQAVKDMEADPDIETVQLNPAVEHNLSKFFQEAGQVKTEMEEISNLLIELQTLNEEAKSIFSAKILGGLRDRMDSNVVSILRKAKTAKSRLEALDRSNEKNRRNSEAFKESSHVDRTRISVTNGLRVKLRELMNDFQFLREKILRDHKEDLRRTYYTATGEQLSEEVIEKIVTGGERIDLFQGNKAKHQAVLEVQRSLSKLHQVFLDMGALVETQGEKMNDIEENVANARGFINGGTNSLYYANQTKKNKKWAYWVAAVVLIIVLVCFIATLVS 290
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 15775983 15776855 + Bpe001360.1 Bpe15g00424 116103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00424 290 Gene3D - 193 290 - -
Bpe15g00424 290 CDD SynN 42 194 IPR006011 GO:0016020
Bpe15g00424 290 PANTHER SYNTAXIN-112 3 286 - -
Bpe15g00424 290 Pfam Syntaxin 44 232 IPR006011 GO:0016020
Bpe15g00424 290 MobiDBLite consensus disorder prediction 108 129 - -
Bpe15g00424 290 Coils Coil 52 72 - -
Bpe15g00424 290 Gene3D - 38 167 - -
Bpe15g00424 290 PANTHER SYNTAXIN 3 286 IPR045242 -
Bpe15g00424 290 CDD SNARE_syntaxin1-like 201 256 - -
Bpe15g00424 290 SUPERFAMILY t-snare proteins 40 252 IPR010989 GO:0016020|GO:0016192
Bpe15g00424 290 Coils Coil 100 120 - -
Bpe15g00424 290 SMART SynN_4 37 164 IPR006011 GO:0016020
Bpe15g00424 290 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 197 259 IPR000727 -
Bpe15g00424 290 SMART tSNARE_6 192 259 IPR000727 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00425 Bpe-Chr7:4783671 Bpe15g00424 Bpe-Chr15:15775983 1.08E-120 dispersed
Bpe15g00424 Bpe-Chr15:15775983 Bpe08g00351 Bpe-Chr8:2103594 1.14E-65 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00424 K08486 - qsu:111998859 381.333