Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00426 ATGTTTAATCAGATTCAAGTGAAGAACGTAAGCAGACTATGCCATGCAAAACCAATCGTAACAGTTAACGGCAGGTTTCCAGGTCCAACAATCTATGCCAGAGAAGGAGATAGGGTTGTCGTCAATGTCACAAACCATTCACAATATAACATGTCAATTCATTGGCATGGACTGAAGCAATATAGAAATGGGTGGGCAGACGGACCAGCTTACATTACACAATGCCCGATTCAAACAGGTCGTAGCTATGCATACGACTTCAATGTGACAGGACAAAGAGGAACCTTATGGTGGCATGCTCACATTCTCTGGCTGAGGGCTACTGTTTATGGTGCAATTGTAATCATGCCGAAACTAGGAACTCCATTTCCTTTTCCGCAACCAACTAGAGAATTTGAGCTTGTGTTAGGAGAGTGGTGGAATAATGATGTGGAAGAAGTTGAGAAGCAAGGGAACATGATGGGTTTGCCACCAAACATGTCAGATGCACATACAATCAACGGGAAGCCAGGGCCATTGTTTCCATGCTCCGAAAAACATACTTATGCTATGGAGGTGGAAGAAGGGAAGACATACCTTCTGAGAATCATCAACGCTGCCCTCAATGATGAGCTTTTCTTTGCCATTGCCGGTCATAACATGACAGTGGTGGAGGTCGATGCAGTTTATACAAAACCATTCACTACGCAAGCTATACTAATTGCACCAGGCCAGACCACGAACGTCCTGCTTCAAGCCAACCAAGCTCCAAACAGATATTTCATGGCTACAAGGCCTTTCCTTGACGTTCCAATTGCAATCGACAACAAAACAGCCACTGCAATTCTTCAATACAAAGGCATTCCAAATAATGTTCTTCCAAGCCTTCCTCAGTTACCTGCCCCTAATGACACTGAGTTTGCTTTAGGCTATGACAAGAAGCTGAAGAGCTTAAACACACTGCAGTTTCCTGCTAATGTTCCCCTGAAGGTAGATCGAAAGCTCTTTTACACCATCGGTTTGGGCATGAATGCTTGCCCCACATGCTTGAATGGGACCAGATTTCTTGCTTCTTTGAACAACATCTCCTTCGTGATGCCCACTGTTGGTCTTCTTCAAGCTCACTATTTCAACATCAAAGGGGTATTCAGAACTGATTTCCCTGACAAGCCCCCAACTCCTTTCAACTACACTGGTGCACCCCTCACTGCTAATCTAGGCACTACAGTGGGAACAAGGCTGAGCAAGCTTGCATTTAATTCTACTGTTGAGCTGGTGCTTCAAGATACCAATCTTTTGACAGTAGAATCACACCCATTTCATCTCCATGGCTACAACTTCTTCGTCGTAGGGACGGGGATCGGAAATTTTGATCCTGTCAAAGACCCACTTGAGTATAATTTGGTCGATCCTGTTGAGAGAAATACTGTTGGAGTTCCCACTGGAGGGTGGACAGCCATTCGATTCCGAGCTGATAATCCAGGGGTTTGGTTCATGCATTGTCATCTGGAGCTTCATACGGGTTGGGGTTTGAAGACCGCATTTGTGGTGGAAAATGGTCTGGGGAAGGATCATACAATCCTTCCCCCACCCAAGGATCTTCCACAATGCTAA 1593 45.13 MFNQIQVKNVSRLCHAKPIVTVNGRFPGPTIYAREGDRVVVNVTNHSQYNMSIHWHGLKQYRNGWADGPAYITQCPIQTGRSYAYDFNVTGQRGTLWWHAHILWLRATVYGAIVIMPKLGTPFPFPQPTREFELVLGEWWNNDVEEVEKQGNMMGLPPNMSDAHTINGKPGPLFPCSEKHTYAMEVEEGKTYLLRIINAALNDELFFAIAGHNMTVVEVDAVYTKPFTTQAILIAPGQTTNVLLQANQAPNRYFMATRPFLDVPIAIDNKTATAILQYKGIPNNVLPSLPQLPAPNDTEFALGYDKKLKSLNTLQFPANVPLKVDRKLFYTIGLGMNACPTCLNGTRFLASLNNISFVMPTVGLLQAHYFNIKGVFRTDFPDKPPTPFNYTGAPLTANLGTTVGTRLSKLAFNSTVELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKDPLEYNLVDPVERNTVGVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFVVENGLGKDHTILPPPKDLPQC 530
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 15780045 15781980 - Bpe001362.1 Bpe15g00426 116105

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00426 530 Pfam Multicopper oxidase 380 512 IPR011706 GO:0005507|GO:0016491
Bpe15g00426 530 Gene3D - 339 530 IPR008972 -
Bpe15g00426 530 SUPERFAMILY Cupredoxins 5 142 IPR008972 -
Bpe15g00426 530 CDD CuRO_2_LCC_plant 134 278 IPR034285 -
Bpe15g00426 530 Pfam Multicopper oxidase 5 118 IPR011707 GO:0005507
Bpe15g00426 530 ProSitePatterns Multicopper oxidases signature 1. 488 508 IPR033138 -
Bpe15g00426 530 PANTHER MULTI-COPPER OXIDASE 5 530 IPR045087 -
Bpe15g00426 530 Gene3D - 129 313 IPR008972 -
Bpe15g00426 530 SUPERFAMILY Cupredoxins 321 530 IPR008972 -
Bpe15g00426 530 Gene3D - 4 124 IPR008972 -
Bpe15g00426 530 TIGRFAM laccase: laccase 4 530 IPR017761 GO:0046274|GO:0048046|GO:0052716
Bpe15g00426 530 CDD CuRO_3_LCC_plant 375 513 IPR034289 GO:0005507
Bpe15g00426 530 SUPERFAMILY Cupredoxins 125 296 IPR008972 -
Bpe15g00426 530 Pfam Multicopper oxidase 134 280 IPR001117 -
Bpe15g00426 530 ProSitePatterns Multicopper oxidases signature 2. 493 504 IPR002355 GO:0005507
Bpe15g00426 530 PANTHER LACCASE 5 530 - -
Bpe15g00426 530 CDD CuRO_1_LCC_plant 4 117 IPR034288 GO:0005507
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00426 K05909 E1.10.3.2; laccase [EC:1.10.3.2] - fve:101314321 994.571
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe13g00441 Bpe15g00426 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01260 Bpe-Chr4:18481521 Bpe15g00426 Bpe-Chr15:15780045 0 dispersed
Bpe08g01345 Bpe-Chr8:14599209 Bpe15g00426 Bpe-Chr15:15780045 0 dispersed
Bpe08g01412 Bpe-Chr8:14954570 Bpe15g00426 Bpe-Chr15:15780045 0 dispersed
Bpe10g00091 Bpe-Chr10:1368195 Bpe15g00426 Bpe-Chr15:15780045 7.85E-82 dispersed
Bpe11g00734 Bpe-Chr11:5584364 Bpe15g00426 Bpe-Chr15:15780045 0 dispersed
Bpe15g00426 Bpe-Chr15:15780045 Bpe15g01182 Bpe-Chr15:20666842 0 dispersed
Bpe02g00194 Bpe-Chr2:1356348 Bpe15g00426 Bpe-Chr15:15780045 5.11E-121 transposed
Bpe02g01962 Bpe-Chr2:21502417 Bpe15g00426 Bpe-Chr15:15780045 5.41E-07 transposed
Bpe08g01045 Bpe-Chr8:12649891 Bpe15g00426 Bpe-Chr15:15780045 3.72E-57 transposed
Bpe15g00517 Bpe-Chr15:16359413 Bpe15g00426 Bpe-Chr15:15780045 0 transposed
Bpe13g00441 Bpe-Chr13:11953027 Bpe15g00426 Bpe-Chr15:15780045 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g988 Blo04g00914 Blo16g00049 . . Bpe15g00426 Bpe13g00441 . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone6ag1630 Cone9ag1555 . . . . . . Bda11g01862 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000013 13 15 12 14 11 15 17 15 13 14 14 15 22 14 16 19 15 33 6 15 14 14 15 20 18 14 13 15 19 34 484
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe15g00426 Bpe_Chr15 FPKM 2.791979 3.021778 1.757173 1.356375 2.358596 2.483745 2.162572 0.923189 0.831017 0.716576