Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00428 ATGGTGAACTTAGTGGAAGCTCAGAAGCCATTGCTGCATTGGCTAATGAAGATGGCCGGGGTGAGACCTTACTCTGTCGAGATTCAGGCGGGGACAACGATGAACTTCTGGGTTCCCTCTGAGACGCTGAAGAAGGCGAGGAAAAATGAAAACGTCGATACCCCGATAAGGCCAAGCAAAGCCGTCGTCGTCCTTGTCCATGGCTTCGCAAGCGAAGGCATAGTGACGTGGCAGTTTCAGGTTGGCTCTTTAACAAAGAAATACTGGGTCATCGTCCCAGACCTGCTCTTTTTCGGCGGCTCGACAACGGACAAGCCGGACAGGTCGCCGGCGTTTCAGGCGGAGTGTTTGGCGGCGGGGTTAAAGAAGCTCGGGGTGGAGAAGTGTACGTTAGTGGGGTTCAGCTACGGGGGTATGGTGGCGTTCAAAATGGCGGAGCTTTACCCGGAGATGATTCAAGGCATGGTTATTTCAGGGTCAATCCTAACCATGACGGACTCGATAAGCAAGGAGACGATGAAGAGAATCGGGTTTAATTCTTCGTCGGAGCTGCTGCTGCCGACGTCGGTGAAGGGTCTCAAAGCGTTGCTCTCCATTGCTGCACATAAAAAACTATGGTTTCCTGATCGTCTTCACAAAGATTTTCTCGAGGTCATGTTCAGCAACAGAAAGGAGAGAGCAGAGCTTCTTGATGGTTTGATCATCAGCAACAAGGACTCCACCATACCCAAGTTCTCTCAGGCAATCATTATTCTAACTTTGAGGGTTCATCTGTTGTGGGGGGAGGAAGATCAGATTTTCCAGGTGGAGCTAGCCAAGAAAATGAAAGAGGAACTCGGGAGTCAAGCAACATTCCAAGGCATACGAAAGGGCGGCCATTTAGTTCACCTGGAGCGCCCCTGCGTCTACAACAGATGTCTCAAGCGATTCCTTCAGCAAAACGGTGTCGTATCAAACTGA 960 50.62 MVNLVEAQKPLLHWLMKMAGVRPYSVEIQAGTTMNFWVPSETLKKARKNENVDTPIRPSKAVVVLVHGFASEGIVTWQFQVGSLTKKYWVIVPDLLFFGGSTTDKPDRSPAFQAECLAAGLKKLGVEKCTLVGFSYGGMVAFKMAELYPEMIQGMVISGSILTMTDSISKETMKRIGFNSSSELLLPTSVKGLKALLSIAAHKKLWFPDRLHKDFLEVMFSNRKERAELLDGLIISNKDSTIPKFSQAIIILTLRVHLLWGEEDQIFQVELAKKMKEELGSQATFQGIRKGGHLVHLERPCVYNRCLKRFLQQNGVVSN 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 15794409 15795605 - Bpe001364.1 Bpe15g00428 116107

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00428 319 Pfam alpha/beta hydrolase fold 62 300 IPR000073 -
Bpe15g00428 319 PANTHER SI:DKEY-122A22.2 2 314 - -
Bpe15g00428 319 PRINTS Epoxide hydrolase signature 145 158 IPR000639 GO:0003824
Bpe15g00428 319 PRINTS Epoxide hydrolase signature 288 310 IPR000639 GO:0003824
Bpe15g00428 319 PRINTS Epoxide hydrolase signature 87 102 IPR000639 GO:0003824
Bpe15g00428 319 PRINTS Epoxide hydrolase signature 131 144 IPR000639 GO:0003824
Bpe15g00428 319 PRINTS Alpha/beta hydrolase fold signature 145 158 IPR000073 -
Bpe15g00428 319 PRINTS Alpha/beta hydrolase fold signature 256 270 IPR000073 -
Bpe15g00428 319 PRINTS Alpha/beta hydrolase fold signature 87 102 IPR000073 -
Bpe15g00428 319 PRINTS Alpha/beta hydrolase fold signature 131 144 IPR000073 -
Bpe15g00428 319 SUPERFAMILY alpha/beta-Hydrolases 59 313 IPR029058 -
Bpe15g00428 319 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 2 314 - -
Bpe15g00428 319 Gene3D alpha/beta hydrolase 17 315 IPR029058 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00428 - - - tcc:18610921 474.937
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00432 Bpe-Chr7:4898630 Bpe15g00428 Bpe-Chr15:15794409 1.05E-88 dispersed
Bpe14g00453 Bpe-Chr14:4129088 Bpe15g00428 Bpe-Chr15:15794409 1.19E-39 dispersed
Bpe15g00428 Bpe-Chr15:15794409 Bpe14g00283 Bpe-Chr14:2835048 4.96E-55 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g977 Blo04g00917 . . . Bpe15g00428 . . . Cmo04g00877 Cmo16g00763 . . . . . . . . . . . . . . . . . . . . . Cone8ag0812 . . . . . Chy07g01245 . . . . . . . Bma03g00989 . Sed05g3619 . . Cma16g00706 . . . . Cpe14g00603 Bhi10g02010 Tan05g1308 Cmetu07g0234 . Hepe08g1015 . . . . . . . . . Lsi07g00150 Csa04g00453 . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002258 2 2 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3 2 2 2 1 2 2 3 2 2 2 5 2 63
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe15g00428 Bpe_Chr15 FPKM 30.107838 29.274855 18.234968 17.600332 19.066116 20.262598 22.410936 25.626965 26.995901 27.414627