Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00441 ATGAGTGCAAAAGTCAATCTGATAACCCCATCTTCGCCGGATAACATGTCCGATTGTGGTTCCAAAGAGCAGGACAGGTTTCTTCCCATTGCCAACGTTGGCCGTATCATGAAGAAGTCTCTCCCCTCAAACGCTAAAATATCGAAGGAAGCTAAAGAAACCGTCCAGGAATGTGTTTCCGAGTTCATTAGCTTCATCACCGGAGAAGCTTCCGATAAGTGTCTTCGTGAGAAGAGGAAGACGATCAACGGAGATGATCTTTTGTGGGCTATGACCACTCTTGGTTTCGAAAATTACGTCGGACCCTTGAAAGTTTACCTCGGCAAGTACAGAGAAACTGAAGAAGAAGACTCTCTCCCAAAGTCCTCCTCAGTCCCCACCAAACCCTCCTATCCTTTGGCTTTTACAACGAACGTTGACCTTCAGAACTCTAATGGTAGAGTCATCAGCTATGGAGACAACGTCAATAATACAGCTTCTAAGGTCAATAATGGAGATGTGAATGGGAGTAGAGCCATGGCGGCTCATCTTCATCATGGATCAGAGGGATGTCTCTAA 558 45.7 MSAKVNLITPSSPDNMSDCGSKEQDRFLPIANVGRIMKKSLPSNAKISKEAKETVQECVSEFISFITGEASDKCLREKRKTINGDDLLWAMTTLGFENYVGPLKVYLGKYRETEEEDSLPKSSSVPTKPSYPLAFTTNVDLQNSNGRVISYGDNVNNTASKVNNGDVNGSRAMAAHLHHGSEGCL 185
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 15878632 15879189 - Bpe001377.1 Bpe15g00441 116120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00441 185 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 12 164 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bpe15g00441 185 ProSitePatterns NF-YB/HAP3 subunit signature. 58 74 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bpe15g00441 185 PRINTS CCAAT-binding transcription factor subunit A signature 93 111 - -
Bpe15g00441 185 PRINTS CCAAT-binding transcription factor subunit A signature 55 73 - -
Bpe15g00441 185 PRINTS CCAAT-binding transcription factor subunit A signature 74 92 - -
Bpe15g00441 185 Gene3D Histone, subunit A 15 130 IPR009072 GO:0046982
Bpe15g00441 185 SUPERFAMILY Histone-fold 24 119 IPR009072 GO:0046982
Bpe15g00441 185 MobiDBLite consensus disorder prediction 1 21 - -
Bpe15g00441 185 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-11 12 164 - -
Bpe15g00441 185 MobiDBLite consensus disorder prediction 1 18 - -
Bpe15g00441 185 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 27 91 IPR003958 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00510 Bpe-Chr6:16289772 Bpe15g00441 Bpe-Chr15:15878632 1.82E-45 dispersed
Bpe15g00441 Bpe-Chr15:15878632 Bpe14g00737 Bpe-Chr14:5698458 1.27E-59 transposed
Bpe15g00441 Bpe-Chr15:15878632 Bpe07g00646 Bpe-Chr7:13218659 2.40E-59 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22573 PF00808 CBFD_NFYB_HMF 1.20E-26 CL0012 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00441 K08065 - rcu:8274908 207.608