Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00442 ATGAAAGCACTGACCGGAGCTTTCGTTCTCTTCTGGTTGATCCTGCTGGTGTGCCAAGTGCCCACTCAATCTTCCAGTTTAGACGGTGATGCTTTGAGAAGCTTCAAGGCCAGCTTAGAGGATCCTGACAATGTCTTGCAGAGTTGGGATCCCACCCTAGTAAACCCCTGCACATGGTTTCACGTCTCATGCAATACTGAAAACAATGTTATAAGAGTTGATCTTGGAAATGCAGGATTATCTGGTAAATTGATTCCTCATCTTGGACTGCTTAAAAGCTTACAATACCTAGAACTGTATGGCAACAACATTAATGGAGAGATTCCAAATGAGCTTGGAAATCTTACAGACTTGGTGAGCTTGGATCTTTACATGAACAGTTTAACTGGTCCAATTCCAGACACCTTGGGCAATCTCAAAAAATTGCGTTTCCTACGGCTCAACAATAACTACCTATCTAGTTCAATACCTACATCCTTGACTCATATAAGCTCTCTCCAAGTCATAGATTTATCAAACAACCGTTTATCTGGAGTAGTTCCAGATAATGGATCATTTTTGCTATTTACTCCGCTCAGTTTTGCAAATAATTTGAATCTATGTGGCCAAGTAACTGGTAATCCTTGCCCTGGATCTCCACCATTTTCCCCACCGCCTCCATTTGTTCCACTCTCAGTGCCTGCTTCTCCTGTTGTAAATACCCCCACTGGAGCAATTGCTGGAGGAGTGGCCGCTGGTGCTGCCTTACTATTTGCTGCTCCGGCTGTTTGTTTTGCATATTGGTGGCGAAGGAAGTCAAAAGAACGATTCTTTGACATTCCTGCTGAAAAAGATTCAGAAGTTCAACTGGGACAGCTGAAAAGGTTTTCTCTGCGGGACTTACAAGTTGCCACCGATAACTTTAGTGACAAAAACATTCTAGGAAGGGGTGGATTTGGCAAAGTATACAAGGGACGTTTGGCTGATGGCTCATTGGTGGCCGTAAAACGACTTAAAGAAGAACGTACACCAGGTGGAGAATTACAGTTTCAAACTGAAGTAGAGATGATCAGCATGGCTGTGCATCGGAATCTCCTACGATTACATGGGTTTTGTATGACCTCAAATGAAAGGCTACTTGTTTATCCATTCATGGCCAATGGAAGTCTAGCATCTTGCTTAAGAGAGCGGCCACAAACAGAGGCACCACTCGATTGGTCAAGAAGAAAGAAAGTCGCCCTCGGCACTGCAAGGGGCCTATCTTATTTGCACAATCACTGTGATCCGAAGATCATTCATCGGGATGTTAAAGCTGCAAACATTTTGCTGGATGAGGAGTTTGAGGCCGTGGTTGGTGATTTTGGGTTGGCTAAGCTAATGGACTATAAAGATACCCATGTAACGACTGCCGTTCATGGGACGATCGGCCATATAGCCCCTGAGTATCTTTCCACTGGAAAATCATCGGAGAAGACTGATGTTTTTGGCTATGGAATTATGCTTCTGGAATTAATAACTGGACAGAGAGCTTTCGATCTTGCTCGACTTGCAAACGACGAAGATGTCATGCTGCTAGACTGGGTGAAAGGACTTCTAAAAGAGAAGAAATTGGAGATGCTTGTGGATCCTGATCTGCAGAAACAATATGATGAAATTGAAGTGGAGCAACTAATCCAAGTGGCCCTTCTCTGCACTCAAGGCTCACCGATGGAGCGACCGAAGATGTCGGAGGTGGTCAGAATGCTCGAAGGTGATGGATTGAACGAGAGATGGGATGAGTGGCAGAAAGTCGAGGTCATCTACCACAGCATCGAGATTGCATCCTCTGAAAATTCTGAATGGATTGTCGACTCCTACGACAACCTCCACACTTTCGAACTGTCGGGACCCAGATAA 1875 44.59 MKALTGAFVLFWLILLVCQVPTQSSSLDGDALRSFKASLEDPDNVLQSWDPTLVNPCTWFHVSCNTENNVIRVDLGNAGLSGKLIPHLGLLKSLQYLELYGNNINGEIPNELGNLTDLVSLDLYMNSLTGPIPDTLGNLKKLRFLRLNNNYLSSSIPTSLTHISSLQVIDLSNNRLSGVVPDNGSFLLFTPLSFANNLNLCGQVTGNPCPGSPPFSPPPPFVPLSVPASPVVNTPTGAIAGGVAAGAALLFAAPAVCFAYWWRRKSKERFFDIPAEKDSEVQLGQLKRFSLRDLQVATDNFSDKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLHGFCMTSNERLLVYPFMANGSLASCLRERPQTEAPLDWSRRKKVALGTARGLSYLHNHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVHGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDEDVMLLDWVKGLLKEKKLEMLVDPDLQKQYDEIEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLNERWDEWQKVEVIYHSIEIASSENSEWIVDSYDNLHTFELSGPR 624
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 15880815 15885250 + Bpe001378.1 Bpe15g00442 116121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00442 624 SUPERFAMILY L domain-like 27 197 - -
Bpe15g00442 624 Gene3D Ribonuclease Inhibitor 25 211 IPR032675 -
Bpe15g00442 624 ProSiteProfiles Protein kinase domain profile. 301 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe15g00442 624 ProSitePatterns Protein kinases ATP-binding region signature. 307 329 IPR017441 GO:0005524
Bpe15g00442 624 Gene3D Transferase(Phosphotransferase) domain 1 378 595 - -
Bpe15g00442 624 Gene3D Phosphorylase Kinase; domain 1 270 377 - -
Bpe15g00442 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 424 436 IPR008271 GO:0004672|GO:0006468
Bpe15g00442 624 PANTHER - 9 624 - -
Bpe15g00442 624 SMART serkin_6 301 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe15g00442 624 SUPERFAMILY Protein kinase-like (PK-like) 281 576 IPR011009 -
Bpe15g00442 624 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
Bpe15g00442 624 Pfam Protein kinase domain 302 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe15g00442 624 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 9 624 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00054 Bpe-Chr7:448664 Bpe15g00442 Bpe-Chr15:15880815 5.00E-102 dispersed
Bpe07g00340 Bpe-Chr7:2671734 Bpe15g00442 Bpe-Chr15:15880815 0 dispersed
Bpe08g00311 Bpe-Chr8:1859415 Bpe15g00442 Bpe-Chr15:15880815 5.53E-69 dispersed
Bpe11g01195 Bpe-Chr11:8910403 Bpe15g00442 Bpe-Chr15:15880815 0 dispersed
Bpe13g01475 Bpe-Chr13:19998380 Bpe15g00442 Bpe-Chr15:15880815 3.94E-09 dispersed
Bpe15g00442 Bpe-Chr15:15880815 Bpe15g00364 Bpe-Chr15:15187026 6.93E-151 dispersed
Bpe15g00442 Bpe-Chr15:15880815 Bpe13g00502 Bpe-Chr13:12415241 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63764 PF00069 Pkinase 1.40E-45 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00442 K13418 - pvy:116139875 939.102