Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00444 ATGAACGCATATGCACAGTTTATCTCCTTGAGAAGGATGGATATATACGAACCAATGCACCACATTGATATGTGGGGAGAAAACTTCAAGTATAATGTCAATCTCACTACCCCTCTGACAATGATCATGGAAGCCGACCCAAAATTAGATAATCAGTCGGATGATGCTTCGCTTGGATCACTTGGACATCCTAACCATTATGAGAACCATGAAACAACTAAGCCTGTCGACAAGGTAAAAAGACGTCTTGCACAAAATCGTGAGGCAGCTCGTAAAAGCCGTTTGCGGAAAAAGGCATATATTCAGCAGTTAGAAACAAGTCGATCGAAGCTGATTCAATTGGAGCAGGAGATTGATAAAGCAAGACAACAAGGTCTATATGTTGGTAGCAGACTTGATGCCAATCCGTTGAGTTTCTCTGGACCTGTAACTTCAGGTGTCTCGACATTTGAGCTGGAGTACGGACATTGGGTGGAAGAGCAAAATAGGCAGATATGCGAATTTAGAAAGGCCCTTCATACAGATATAACTGATTTGGAGCTACGAATTATGGTCGAAAATGGTATGAGACATTATTTTGATCTGTTTCGGATGAAAGCAAGAGCGGCAAAGGCTGATGTCTTCTATGTAATGCATGGGATGTGGAAAACTTCAACTGAACGGCTTTTCTTGTGGATTGGAGGCTCTCGCCCGTCGGAGCTTCTCGAGGTACTTGCGCCGCAGTTCGATACATTGACCAAACAGCAACTTGTTGATGTTAACAATCTTCAAAGGTCTTGTAAGCAGGCAGAAGAAGCTCTTCTGCAAGGCATGGAAAAACTCCGTCAGGCTCTAATTGATGTAGTGGCTTGCCAAGTGGCTGAAGGGACTCTTCCCCTTCAGATGGAAACTGCGATGGAGAGGCTAGAAGATCTAGTCAGCTTTGTTAACCAGGCTGACCATCTACGGCAAGAAACACTTCAGCAAATGTACAAAATCCTCACGACCCGCCAATCTGCTCACGGGCTGCTTGTGTTGGGAGAATATTTCCAACGACTTCGAGCATTGAGTTCGCTTTGGTCCAATCGACCGCCTTATGAATCC 1083 44.6 MNAYAQFISLRRMDIYEPMHHIDMWGENFKYNVNLTTPLTMIMEADPKLDNQSDDASLGSLGHPNHYENHETTKPVDKVKRRLAQNREAARKSRLRKKAYIQQLETSRSKLIQLEQEIDKARQQGLYVGSRLDANPLSFSGPVTSGVSTFELEYGHWVEEQNRQICEFRKALHTDITDLELRIMVENGMRHYFDLFRMKARAAKADVFYVMHGMWKTSTERLFLWIGGSRPSELLEVLAPQFDTLTKQQLVDVNNLQRSCKQAEEALLQGMEKLRQALIDVVACQVAEGTLPLQMETAMERLEDLVSFVNQADHLRQETLQQMYKILTTRQSAHGLLVLGEYFQRLRALSSLWSNRPPYES 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 15907624 15909673 - Bpe024564 Bpe15g00444 116123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00444 361 Gene3D - 77 127 - -
Bpe15g00444 361 Pfam bZIP transcription factor 77 111 IPR004827 GO:0003700|GO:0006355
Bpe15g00444 361 Coils Coil 97 124 - -
Bpe15g00444 361 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 76 120 IPR004827 GO:0003700|GO:0006355
Bpe15g00444 361 PANTHER TRANSCRIPTION FACTOR TGA1 3 358 - -
Bpe15g00444 361 PANTHER TRANSCRIPTION FACTOR TGA9 3 358 - -
Bpe15g00444 361 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 81 96 IPR004827 GO:0003700|GO:0006355
Bpe15g00444 361 MobiDBLite consensus disorder prediction 50 75 - -
Bpe15g00444 361 Pfam Seed dormancy control 164 239 IPR025422 GO:0006351|GO:0043565
Bpe15g00444 361 SMART brlzneu 74 134 IPR004827 GO:0003700|GO:0006355
Bpe15g00444 361 ProSiteProfiles DOG1 domain profile. 147 356 IPR025422 GO:0006351|GO:0043565
Bpe15g00444 361 Coils Coil 253 273 - -
Bpe15g00444 361 SUPERFAMILY Leucine zipper domain 78 118 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01612 Bpe-Chr2:18997876 Bpe15g00444 Bpe-Chr15:15907624 1.22E-99 dispersed
Bpe14g00350 Bpe-Chr14:3354103 Bpe15g00444 Bpe-Chr15:15907624 5.41E-73 dispersed
Bpe15g00444 Bpe-Chr15:15907624 Bpe15g00992 Bpe-Chr15:19459390 5.81E-99 dispersed
Bpe13g00457 Bpe-Chr13:12079658 Bpe15g00444 Bpe-Chr15:15907624 1.35E-92 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22574 PF14144 DOG1 2.80E-25 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00444 K14431 - csv:116401613 498.434