Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00463 ATGGAAGTAGGTGATGAACAAGCTTCGGGATTGTATAAAACTCGTCTTGAAGATGAGGGGCAGCTGCAGCTGGGAGGCCGTGGGATTGACAATTCGGCGCCGAGCTTGGACCTTATGGATGTCGATCAGTGCCAAACTGTTGGAGATATGGACGATTCCCGCCTCCTCGGGGCTTCGAACTCTGTGACTGCTGAAGGCGTGGATTGTGGGGCAGCTGGGGCGGATGGTCCTTCTCCTGAGATTGACTTGAAGGTTGACGTGGAGGTGAAGATGAGGGCGGAGGAGCTTAGTTTGGTTAAGCGAAGACGAGGTCGGCCTCCTCGGGGTCAACCAAAAGCGACGCCTCTACCGAGGAAGAGCGTTGCGAAGGACGAAGAGGATGTCTGCTTTATTTGCTTTGATGGCGGGAGCCTCGTTCTCTGCGATCGCCGGGGTTGCCCCAAGGCCTATCATCCTGCTTGCATCAAGAGGGACGATGCATTTTTTCAATCAAAAGCTAAATGGAATTGTGGATGGCATATATGCAGCAGTTGTCGGAAGGCATCGCACTATATGTGCTATACATGTACCTTTTCTTTGTGCAAAGGATGCATTAAAGATGCCGATTATCAATGTGTAAGGGGAAGCAAAGGATTGTGTGGAACATGTATGAGAACTATAATGCTATTGGAGAAAAGCTTGCTAGGAAATAGTGAAGTAGCGCAAGTGGATTTCGATGACAAAAGTAGTTGGGAATATCTTTTCAAAATATATTGGGTATACTTAAAACAAAAGCTCTCTTTAACTCTTGATGAACTTGCTCGCGCTAAAAATCCATGGAGAGGAGGTGGGACCATGGATCAAAATGGAGGGTTTTTAGGAAACTGTTGTGATGCTAATCATAGCAAGAGTGGTGGTTCAGATAGTGCCATTAGAGGCACAGAGGCTGCCAATTCGAAGACGAAGGCATTTAAGAGGCAACAAAATTTTTCCTGCGAGGTAGGATTCTTAATTGAAAATTCAACAGATGATAAGATGATAACATCAACTGAAGGAAAGGTTTGGGCTACAAATGAGCTTCTGGAGTTTGTTGCGCACATGAGAAATGGTGATATTTCTGTGCTTTCGCAGTTGGATGTAGAGTCTTTAGTGCTAGAATATATTAAGGAAAACAATCTTCGTGATCCTCAACAGAGAAATCAATTTATTTGTGATCCTATGCTGAGGAAACTGTTTGGAAAACAACGAGTTGGTCATTTTGAAATGCGCAAGCTTCTTGAATATCATTTGCTCTCTAAAGAAAGTTCTTCATCTGCTGACAGAAGCAGTAAAGTTCTTGATGTCCCAGTTGGCCAGGTGGAAGTAAAGGGAAATTTGAGTTGCCAATCAATAACTGATAGTGATAGGAAGCATAGAAAGCGGAAAAAGGCAGATGATAGGAAGGAACAAACGAATCCTGATGAATATGCAGCTATTAATGTTCACAACATTAACCTGATTTACTTACCACGAAATTTAATAGAGACCATTAGTGATACTGAAAATTTTCATGACAAAGTTGTCGGTTCAATAGTGCGAATGCAAATTTCAAGGTGTGATCAAAAGCCTGACTTGTATAGGCTTGTCCAAGTTGTAGGCACGAGCAAGAGTTCTGAGCCATATGCAATTGGTGAGAAAACAACCGATGTAATGCTTGATATATTAAATTTAGACAAGAAAGAGGCAATATCGCTTGAAGGGATTTCAAATCAAGAATTTTCTGAGGATGAATGCCGGTGTCTACGAGAGAGTGTAAAATGTGGGCTTCTGAAGAGATTTACTGTGGGAGAGATTCAGAAGAAAGCAATGACACTTCAAGCGCTGAAGGTTAATGATGTGAGTTTAGAGTTGGTGGAGAAATTACAGTTTCTTAGATCCTCTGAAGAACGTCAGCGTCGACTTGCTGAAATTCCCGAAATACATGCTGATCCATCTATTGATCCAAGTTATGAATCTGATGACGGTACAAAAGATGTGAAAAAGACTAAACAAGGAGATCATGTTGACAAAGAAGGTGCTTCCTGGCCTACGGACACAATGGTTGAATCATCATGGTTTGGAAGCAAGTCACCTAGTGTACCAAAGAACCATGGAAATCCTACTAGTTTAACGATCAATAATGGGAGTAATCAAGCTGTGGTTTCAGAGGTGTTGCTGCCTCCTCTTTCTAATAGGATAGAACACTTAAAGAATGAGACTGATATGGAAAAGATGTGGCACTACCAGGACCCTGCTGGAAACGTTCAGGGTCCTTTTTCAATGGCACAGTTGCAAAAATGGAGTTCAAGTGGACACTTCCCGCTTCATTTAAGAATATGGAAGATGAGTGAAATGCCTACCGATTCTATACTTTTAACTGATGCTTTGATGGCTCAGGAAAGTAAGAAGTCCCTCCTGCGCTATAAGAACCAGGTACTGTCTGCAATTGGGCTATGTTCTGATGATGGTGAAGATCAGTCCAATGATGAGTGGAGTCGAAATCTACATACTAATGAATCAGGTTCTCCTTCAGATTGGAATCGACCAGCAGATGTAGTCAACTCTAGTGAGTGTCCACCAAAGAGTTTTGAGCAAAGAACTACAAATGAAGATAGCACAGGTACTCACCAGTCCCAAGTGCATGAACTCAGTATATCACCAACATTATCTGCTCAGGCACTTCAATTCTCAAATCAAATAGGGGAAGTTTATAGGGGTGAGAAAAGCACTAGTCCAACTCTTGGGAACCAGAGTTCACGTAAAACCATCGAGGTTGAGGCTAACAGTGGACAGAGCTGTGAGAAACGTTCTGACAGCGAGTGCTGTTCTGGGCAATCTTCTGGTCAAAATTGGAGACCTCTACCAGGGAATGCTACCCAAGATTCCACCGACGGTGTCATTTCTTCTGCTAAGTCAACTGGACAACAAAATTGCGGCCTTGATTTCCCTGATCTTCCCTGCCCTACTCCAAAGGCAGATCTAGGCTTTACAGGTCAAGCTGCTGAAATCAAGCAGTCTGCTTCGGGTGTTCTTATTCAAGATTCAGTCCCTAGCTGGAGTACTGGTTCAAGTTTAGTGGGTGGAAAGAGACAGCTTCCTGATGTTGCTGGTGGTTGGAGTGTTTATTCTACTGCACCAACCAAAGCTTCTACTGAGGAACGGGACTCCAGTCTTATTACTGCATCTTCTCTGAAACCAGCAGAATTTATCAGTGATTGTGCTGCTACGCCTGCTTCAGTAAATGATCAATTCACACACCCCTCACCCTCTCATCCTACATCAAATGTGTCTGATTGGCCAGAAATTATTGAGCCTAATGAGTTCAACTCCTTGGGAGATGAATCACTCTCAGATTTGCTTGCAGAAGTTGAAGCTATGGAATCTTTGAGCGAATTGGCTTCATCAACATCGATTATGAACTGCCGTGACGATTTGACGCATGGTTGCAAAATTGATTGTTTCAGCCCTATAGGGCGCTTGAGTCCCAATCCCGAGATGGGGAAAGGCGATGCTTTGAGTTCCACTGGTGATGGACATGCACAATCACAATCCACAATCACTGACGAACCACTCCTGAGATTGCACGTGTTTGATATTGATCCCCAAATGAAATTGGCCGGCCGTTCGTCAACGAGCTCAGATGTGGACATAAATAAGAAATACAATGATGTTTCAACCAATCAATGGAAAGGTGGTACAGTTCTCCAAAACTTGACGCCCTTCTCCGCAGCTTTAAATATGGACACTGCAGAAAACACTTGGAGAATAGGATCAGAAGCTACTTGGGGAGGTGCAGATATTGGGTGGGGTGGGCTAAACAAAGGAAATCCAAGCGTAGACTGGGAAATTCGACTGGATTCAATTCAAGAAATGGGAAGCATGAATTCTGGCACATCAGCTGGAAACAACACAACCAATTGGTATGGCCAGCAAAAATGCAGTCTTGACCTGTTACAGAGCCCAAGAGATCGAAGTAATCAGGGAAGGGACCTAGATAACGGTAGAGGTAGGTCTTTCTGGAATAAGCAACCCGGATTTGGAGGTGGCAATAGAAGTGGAACAGCCCATCCTTCGCCGAGAGGTCAGGGCCAGCGAGTTTGTAAATTTTACGAGAGTGGCTATTGCAAAAGAGGGGCATCGTGTAGTTACCTGCACCTTTAA 4158 43.77 MEVGDEQASGLYKTRLEDEGQLQLGGRGIDNSAPSLDLMDVDQCQTVGDMDDSRLLGASNSVTAEGVDCGAAGADGPSPEIDLKVDVEVKMRAEELSLVKRRRGRPPRGQPKATPLPRKSVAKDEEDVCFICFDGGSLVLCDRRGCPKAYHPACIKRDDAFFQSKAKWNCGWHICSSCRKASHYMCYTCTFSLCKGCIKDADYQCVRGSKGLCGTCMRTIMLLEKSLLGNSEVAQVDFDDKSSWEYLFKIYWVYLKQKLSLTLDELARAKNPWRGGGTMDQNGGFLGNCCDANHSKSGGSDSAIRGTEAANSKTKAFKRQQNFSCEVGFLIENSTDDKMITSTEGKVWATNELLEFVAHMRNGDISVLSQLDVESLVLEYIKENNLRDPQQRNQFICDPMLRKLFGKQRVGHFEMRKLLEYHLLSKESSSSADRSSKVLDVPVGQVEVKGNLSCQSITDSDRKHRKRKKADDRKEQTNPDEYAAINVHNINLIYLPRNLIETISDTENFHDKVVGSIVRMQISRCDQKPDLYRLVQVVGTSKSSEPYAIGEKTTDVMLDILNLDKKEAISLEGISNQEFSEDECRCLRESVKCGLLKRFTVGEIQKKAMTLQALKVNDVSLELVEKLQFLRSSEERQRRLAEIPEIHADPSIDPSYESDDGTKDVKKTKQGDHVDKEGASWPTDTMVESSWFGSKSPSVPKNHGNPTSLTINNGSNQAVVSEVLLPPLSNRIEHLKNETDMEKMWHYQDPAGNVQGPFSMAQLQKWSSSGHFPLHLRIWKMSEMPTDSILLTDALMAQESKKSLLRYKNQVLSAIGLCSDDGEDQSNDEWSRNLHTNESGSPSDWNRPADVVNSSECPPKSFEQRTTNEDSTGTHQSQVHELSISPTLSAQALQFSNQIGEVYRGEKSTSPTLGNQSSRKTIEVEANSGQSCEKRSDSECCSGQSSGQNWRPLPGNATQDSTDGVISSAKSTGQQNCGLDFPDLPCPTPKADLGFTGQAAEIKQSASGVLIQDSVPSWSTGSSLVGGKRQLPDVAGGWSVYSTAPTKASTEERDSSLITASSLKPAEFISDCAATPASVNDQFTHPSPSHPTSNVSDWPEIIEPNEFNSLGDESLSDLLAEVEAMESLSELASSTSIMNCRDDLTHGCKIDCFSPIGRLSPNPEMGKGDALSSTGDGHAQSQSTITDEPLLRLHVFDIDPQMKLAGRSSTSSDVDINKKYNDVSTNQWKGGTVLQNLTPFSAALNMDTAENTWRIGSEATWGGADIGWGGLNKGNPSVDWEIRLDSIQEMGSMNSGTSAGNNTTNWYGQQKCSLDLLQSPRDRSNQGRDLDNGRGRSFWNKQPGFGGGNRSGTAHPSPRGQGQRVCKFYESGYCKRGASCSYLHL 1385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 16014176 16020472 - Bpe001397.1 Bpe15g00463 116142

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00463 1385 MobiDBLite consensus disorder prediction 647 680 - -
Bpe15g00463 1385 CDD SWIB-MDM2_like 347 423 - -
Bpe15g00463 1385 ProSiteProfiles SWIB/MDM2 domain profile. 342 425 IPR003121 -
Bpe15g00463 1385 SMART PHD_3 128 174 IPR001965 -
Bpe15g00463 1385 Pfam GYF domain 745 783 IPR003169 GO:0005515
Bpe15g00463 1385 ProSiteProfiles Plus3 domain profile. 484 616 IPR004343 GO:0003677
Bpe15g00463 1385 Gene3D - 485 613 IPR036128 GO:0003677
Bpe15g00463 1385 ProSitePatterns Zinc finger PHD-type signature. 129 189 IPR019786 -
Bpe15g00463 1385 MobiDBLite consensus disorder prediction 647 679 - -
Bpe15g00463 1385 CDD GYF 742 795 IPR003169 GO:0005515
Bpe15g00463 1385 ProSiteProfiles GYF domain profile. 742 796 IPR003169 GO:0005515
Bpe15g00463 1385 MobiDBLite consensus disorder prediction 818 882 - -
Bpe15g00463 1385 Gene3D SWIB/MDM2 domain 336 433 IPR036885 -
Bpe15g00463 1385 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 121 216 IPR013083 -
Bpe15g00463 1385 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44-RELATED 33 1384 - -
Bpe15g00463 1385 SUPERFAMILY Plus3-like 485 613 IPR036128 GO:0003677
Bpe15g00463 1385 SUPERFAMILY GYF domain 738 795 IPR035445 -
Bpe15g00463 1385 MobiDBLite consensus disorder prediction 457 480 - -
Bpe15g00463 1385 MobiDBLite consensus disorder prediction 458 479 - -
Bpe15g00463 1385 ProSiteProfiles Zinc finger C3H1-type profile. 1360 1385 IPR000571 GO:0046872
Bpe15g00463 1385 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 1362 1384 IPR000571 GO:0046872
Bpe15g00463 1385 SMART swib_2 343 428 IPR019835 -
Bpe15g00463 1385 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44 33 1384 - -
Bpe15g00463 1385 MobiDBLite consensus disorder prediction 903 971 - -
Bpe15g00463 1385 SMART rtf1 484 593 IPR004343 GO:0003677
Bpe15g00463 1385 Pfam SWIB/MDM2 domain 353 423 IPR003121 -
Bpe15g00463 1385 SUPERFAMILY CCCH zinc finger 1361 1384 IPR036855 GO:0046872
Bpe15g00463 1385 MobiDBLite consensus disorder prediction 857 882 - -
Bpe15g00463 1385 MobiDBLite consensus disorder prediction 1159 1184 - -
Bpe15g00463 1385 Pfam Plus-3 domain 489 591 IPR004343 GO:0003677
Bpe15g00463 1385 SMART gyf_5 743 798 IPR003169 GO:0005515
Bpe15g00463 1385 MobiDBLite consensus disorder prediction 98 119 - -
Bpe15g00463 1385 CDD PHD5_NSD 128 173 - -
Bpe15g00463 1385 Gene3D - 743 800 IPR035445 -
Bpe15g00463 1385 SUPERFAMILY SWIB/MDM2 domain 345 426 IPR036885 -
Bpe15g00463 1385 MobiDBLite consensus disorder prediction 1317 1362 - -
Bpe15g00463 1385 MobiDBLite consensus disorder prediction 832 850 - -
Bpe15g00463 1385 SUPERFAMILY FYVE/PHD zinc finger 119 173 IPR011011 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00463 - - - zju:107424392 1172.15
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe13g00425 Bpe15g00463 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe15g00463 Bpe-Chr15:16014176 Bpe15g00843 Bpe-Chr15:18455048 5.00E-08 dispersed
Bpe13g00425 Bpe-Chr13:11869794 Bpe15g00463 Bpe-Chr15:16014176 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g1077 Blo04g00896 Blo16g00072 . . Bpe15g00463 Bpe13g00425 . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone6ag1664 . . . Chy07g01268 . . . Bda11g01845 . . . Bma03g00971 Bma06g00105 . . . . . . . . . . . . . . . . . . . . . . . . Csa04g00533 . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005786 2 1 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 1 1 2 1 1 39
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22578 PF03126 Plus-3 4.40E-20 No_clan Bpe TR
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe15g00463 Bpe_Chr15 FPKM 0.0 0.0 0.0 0.0 0.0 0.342809 0.0 0.0 0.200975 0.144345