Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00474 CTTGTTTGGTATAATGCAGGCGTGAATTCGAGTACGTTCACTTTGTTAAACAAGTGCACCCACACGGTATGGCCAGGAATGCTGTCAAATGCAGGGACGGCGGAAATCTCAACCACTGGATTTATGCTCCGCGCTGGCGAGGCAAACACCCTTACTGTTCCGACCTCCTGGTCTGGCCGAGTATGGGGTCGGACCCATTGTTTTGAGGACACCTCCGGAAAGTTCTCTTGCATAACTGGAGACTGTGGTTCCAGTTCAGTAGAATGCAAAGGTTCAGGCGCTGCCCCGCCGGTCACTCTTGCAGAGTTCACTCTGAACGGCTATGACGAGCTCGATTTCTACGATGTTAGCCTCGTGGATGGCTACAATCTTCCGATGTTGATCGCGCCAGTTGATGGAACTACGGGTAACTGTACGACCACTGGGTGCTTGGCTGAGTTGAACGGCGGTTGTCCGGCGGAGCTGAGAATGATGGGCGCTGACGAGAGTTCGACAGTGGCGTGTAAGAGCGCTTGCATGGCTTTTGGTGAGCCCCAGTACTGCTGCACCGGCGCTTATGCAAATCCAAATACGTGCAAGCCCAGCTATTACTCCATGCTTTTCAAGAATGTGTGTCCTTTGGCTTATAGCTACGCTTTCGACGACGGAACAAGCACTTTCACCTGTGGATCGGCTAACTATGTTATCACTTTCTGCCCCTCCATAACAACCAGTGCACTTTGCTCAGTGACAATAAAATACAAAAAAAAAAGAAATAAAATGAAAAGAAATACTCTTAAACTGTGTTTTTTTAAGAAAAAATTATTAAGGTGGGATGAATTTTTAAGGAGAGGAACAAGTTTTGCTAGAAAGAGAGCTTCAGGAGCTACCTTCACATTTGTGAACAGGTGCGATTTTACTGTATGGCCGGGAATTCTGGGTAGTCCGAAACTAGATAGTACAGGCTTTGAGCTTCAAAAGGGTCGCTCTCGCTCCTTCCAAGCTCCGACTGGCTGGTCAGGCAGGTTCTGGGGTCGAACCACCTGCAACTTCGACGCCTCTGGCCACGGCGTCTGCGCTACCGGAGACTGTGGCTCCGGCGAGGTTGAGTGCAACGGCGCCAGCGCTACCCCTCCAGCGACACTGGCTGAGTTTACACTCGGCTCCGGATCGCAGGATTTCTACGACGTTAGCCTCGTCGACGGCTTTAACCTGCCTATGATCGTCGAAGGAACCGGCGGGTCGGGTCCGTGTGAAAAGACGGGTTGCGTATCAGACCTGAACCGGCAATGTCCGACGGAATTGAGAGCGGAAGGTGGCGGCGCATGTAGAAGTGCGTGCGAGGCATTTGGGAAGCCGGAGTACTGTTGCAGCGGCGCGTATAATACACCTGCTGTTTGTAAACCTTCAATGTATTCGCAGATGTTCAAATCCGCCTGCCCAAAATCATATAGCTACGCTTACGACGATGCCACCAGCACATTTACCTGCACCGGAGCAGATTATACGATCACATTTTGTCCATCTTCTCCAAGGTAA 1518 50.92 LVWYNAGVNSSTFTLLNKCTHTVWPGMLSNAGTAEISTTGFMLRAGEANTLTVPTSWSGRVWGRTHCFEDTSGKFSCITGDCGSSSVECKGSGAAPPVTLAEFTLNGYDELDFYDVSLVDGYNLPMLIAPVDGTTGNCTTTGCLAELNGGCPAELRMMGADESSTVACKSACMAFGEPQYCCTGAYANPNTCKPSYYSMLFKNVCPLAYSYAFDDGTSTFTCGSANYVITFCPSITTSALCSVTIKYKKKRNKMKRNTLKLCFFKKKLLRWDEFLRRGTSFARKRASGATFTFVNRCDFTVWPGILGSPKLDSTGFELQKGRSRSFQAPTGWSGRFWGRTTCNFDASGHGVCATGDCGSGEVECNGASATPPATLAEFTLGSGSQDFYDVSLVDGFNLPMIVEGTGGSGPCEKTGCVSDLNRQCPTELRAEGGGACRSACEAFGKPEYCCSGAYNTPAVCKPSMYSQMFKSACPKSYSYAYDDATSTFTCTGADYTITFCPSSPR 505
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 16079990 16085687 + Bpe001408.1 Bpe15g00474 116153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00474 505 CDD TLP-PA 12 232 - -
Bpe15g00474 505 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 281 504 - -
Bpe15g00474 505 SUPERFAMILY Osmotin, thaumatin-like protein 289 502 IPR037176 -
Bpe15g00474 505 ProSiteProfiles Thaumatin family profile. 10 233 IPR001938 -
Bpe15g00474 505 Gene3D Thaumatin 11 233 IPR037176 -
Bpe15g00474 505 Gene3D Thaumatin 289 501 IPR037176 -
Bpe15g00474 505 ProSiteProfiles Thaumatin family profile. 288 501 IPR001938 -
Bpe15g00474 505 ProSitePatterns Thaumatin family signature. 348 364 IPR017949 -
Bpe15g00474 505 PRINTS Pathogenesis-related protein signature 348 377 IPR001938 -
Bpe15g00474 505 PRINTS Pathogenesis-related protein signature 314 323 IPR001938 -
Bpe15g00474 505 PRINTS Pathogenesis-related protein signature 290 302 IPR001938 -
Bpe15g00474 505 PRINTS Pathogenesis-related protein signature 335 346 IPR001938 -
Bpe15g00474 505 PRINTS Pathogenesis-related protein signature 491 500 IPR001938 -
Bpe15g00474 505 PRINTS Pathogenesis-related protein signature 386 402 IPR001938 -
Bpe15g00474 505 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 7 248 - -
Bpe15g00474 505 PANTHER OS03G0233200 PROTEIN 7 248 IPR001938 -
Bpe15g00474 505 CDD TLP-PA 290 500 - -
Bpe15g00474 505 Pfam Thaumatin family 295 501 IPR001938 -
Bpe15g00474 505 Pfam Thaumatin family 17 233 IPR001938 -
Bpe15g00474 505 SUPERFAMILY Osmotin, thaumatin-like protein 12 234 IPR037176 -
Bpe15g00474 505 SMART tha2 291 501 IPR001938 -
Bpe15g00474 505 SMART tha2 13 233 IPR001938 -
Bpe15g00474 505 PANTHER OS03G0233200 PROTEIN 281 504 IPR001938 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe10g00159 Bpe15g00474 CCT
Bpe06g00130 Bpe15g00474 CCT
Bpe10g00159 Bpe15g00474 ECH
Bpe06g00130 Bpe15g00474 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01628 Bpe-Chr2:19125861 Bpe15g00474 Bpe-Chr15:16079990 3.00E-57 dispersed
Bpe02g01681 Bpe-Chr2:19414126 Bpe15g00474 Bpe-Chr15:16079990 8.19E-61 dispersed
Bpe05g00142 Bpe-Chr5:3708511 Bpe15g00474 Bpe-Chr15:16079990 8.44E-80 dispersed
Bpe10g00159 Bpe-Chr10:3831886 Bpe15g00474 Bpe-Chr15:16079990 3.68E-77 dispersed
Bpe11g00682 Bpe-Chr11:5246196 Bpe15g00474 Bpe-Chr15:16079990 2.40E-42 dispersed
Bpe13g00376 Bpe-Chr13:11509407 Bpe15g00474 Bpe-Chr15:16079990 1.41E-67 dispersed
Bpe14g00373 Bpe-Chr14:3539637 Bpe15g00474 Bpe-Chr15:16079990 1.28E-58 dispersed
Bpe14g01332 Bpe-Chr14:10543774 Bpe15g00474 Bpe-Chr15:16079990 3.36E-86 dispersed
Bpe13g00412 Bpe-Chr13:11815395 Bpe15g00474 Bpe-Chr15:16079990 2.55E-30 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00474 - - dcr:108222866 652.899