Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00478 ATGGTTTCTGAAGCTCGATTCTTTCTGCCCAACTCATTTTCAATGTCTTATCCTAACCCCAATAACAGAAACTCTCTATATCCTCAAGTTATTCAAACAAATCCCGATGCCCCTCCACCTCGCATCTCTCGTTCCGATCTCAATCCGCCTACTTCTTCTTCTTCTAACCTTTATCCCACCATCGACATGAAAGATCTCGTTGAGAATCTGTTCCCGGACCGGGATGATTGTCACAACCCTGATCCTATTCCTCCTTCTGCTCCTCCTGTAGCGACGGAGGACGTTATTTTCAAAATCTCTGGGGCCATTCTTAATCTCATTGACAGGAATTATAGTGTCGAGCTCGCTTGTGGTGATTTTTCCATTGTCCTTCTACGACAGGGCGAAAATGTGATTGCAGTGCTCGCCCGGGTCGCTGATGAAATCCAATGGCCTTTGACAAAGGATGAAGTGGCCGTCAAACTCGACGAATCACATTACTTCTTCTCTCTTCGCGCTCTGAAAAAGGAAGATTCCAGTTCCGATTCCGATTCGAGCGACGAGGAGGGGGGAAGAAGGAACGACCAGGGCTCTGAAAACATGTTGAATTACGGGCTAACGATCGCATCAAAAGGGAAAGAGAAATCATTGAAGGAATTAGATGGAATTTTGAGTCAATATAGTAGCTTCGCGGTACAGAAGGTGTCGGATAAAGCGAAGAAGGGAGAAGCACTTGATGTGTCTCTGGCAAAGGAGATGTCTCCGGCGGATCTGAAATCGGAGAAGAAGAAGGAACTAATGGAGGGAAAATGCGCGGCGTACTGGACGACATTGGCTCCAAATGTGGAGGATTACAGTGGGACAGCTGCAAAGTTGATCGCCGGTGGTACAGGTCAAGTGATTAAGGGGATTCTCTGGTGTGGCGACGTGACTGTGGAGAGGTTGAAATGGGGGAATGAGGTAATGAAGAAGAGGATGGGCCCTAAATCTGAAGTCGAAATCGACCCTGAAACCTTGAAGAGAATCAAAAGGGTTAAGAGGGTAACAAAAATGACAGAGAAAGTAGCGAATGGGGTGCTGTCTGGAGTTATCAAAGTTTCTGGATTTTTCACAAGCTCAGTGGCGACTTCCAAAGTAGGCAAGAAATTCTTCGGCCTCCTCCCTGGAGAAATTGTGCTTGCTTCTCTGGATGGATTTAGTAAAGTTTGTGATGCTGTTGAAGTGGCTGGAAAAAATGTCATGTCTACATCCTCAACTGTAACCACTGAGCTCGTCTCCCACAGGTATGGGGAGAAAGCTAGCCACGCAACAAATGAAGGTCTCGACGCAGCAGGTCACGCTATAGGCACTGCATGGGCAGCTTTCAAGATCCGAAAGGCCCTTAATCCCAAAAGCGTCGTCAAGCCTTCTACCCTTGCCAAATCTTCTATCAAAGCAGGAGCAGCGGATTTGAAAGCTAAGAGTTCCAATCCCACTGACCTTCAGATATATACATTGATCAATGATGTTTTCTTTAAATCCAAAGCAAGTGATGGTATCATTGAACTTAAGATACCATTGTCGGGAAACTTGTTTAAGTCCGTATATTTATTTCTCAAGTTTACACATCATGTGTTCCTTTCCTTCTATAAAACCTTCAAAGTTGATCCATATAAACTTATTCATCTAAATTCTCATTCAATAAAGTACAATCTAATGGGTACTTCTCCAAGGAGGGTGTTTGACAGAATAGCATGTATGGCAACTATTCTGAGGAGCAAATCTCCACGTGGAAGAAGACTTTTTCATAGAGATGTTGAGCAGCAAGAGCTTCAGCAAGCAAGCACTCTTTGCCTCTCATCATGCTACAGTGTCTTTGTAGCTCGCCTTGCCATAATGGTCATGTTGGCAATTTTAATCGGACTTTTAACAATATTGACGTGGCATTTTACGAAGATCTACACAGCCGAGTCTCTGAACAGCTTAGCATATGGTCTGCGACATGAGCTTCTACAACGTCCAATTCTAAAAATGTCGAGCATCTTGAACTCCACTTCTGAAATAACAACAGCCCAGGTTAAGCTCTTGGAGTACGTCATAAGAAAGTACGATAAGCCCGCAACTCAAGCACAGGAAGTTGAGTTGTATGAATCAATGAAGGCTGTAACTTGGGCTCTATTTGCAAGTGAAAAAGCTCTGGACGCCATCACTATCAACTACAGAAATGGTTTTGTACAGGCATTTCATAGAGATCATAGTAGCAATAATACATTCTATATTTACTCTGATCTCACCAACTATTCTATCTGTTCTACTGAGTCTTATAACCTGAGTAGACTGCCATTAGATCAAGGCTGGTCTGACCATCCGATTCACGGCAACCTTTCTGCAATTTGGTATCAGGAACCACTTGATCCTGTCAGTGGTGTAAAGATTGGAAAATCAAGGTCAATCCCTCCCGAGGATTTGATTAATATCGCTGGAATTTCGCAAGTGCCATATGGTGTGGCCTCATGGGATGTGACTGTTAGCAAGTATATGGACTCACCGTTACTTTCTGCTGCATTGCCTGTCTCGGACCCTTTAAATGAAAGTATTATTGCTGTTGTGGGTGTCACCACTGCACTTTCTAGCGTAGGCCAGCTGATGAAAGAGCTTGTCGAATATCATAGCGGGCATATTTATCTGACGTCTCAAGAGGGTTACTTGCTAGCTACTTCAACCAATGCTCCACTTTTGACAAAAACTATCAAGGGTCCAAAGCTTACGATGGCTGTAGATTCTGAGGATGACTCGATACGATTAGGCGCTGAGTGGCTGCAGAAAACATACGGCTACAATTTTCCTCCAAATCACGAGGTTCATGCAGAGAATGTCAAGCTTGGCCACCAGCAATATTACATTGACTCATTTTTCCTCAATTTAAAGAGACTTCCTATTGTTGGGGTTGTCATCATTCCAAGAAAATACATAATGGGGAAGGTTGATGAGAGAGCTTTCAAAACACTGGTTATCCTAATATCTGCATCATTATGTATCTTAGTCATTGGATGTATCTGCATTTTCATTTTGACTAACGGAGTATCGAAGGAAATGAAACTAAGAGCAGAGTTGATAAGCCACCTGGATGCAAGAAGAAGGGCTGAGGCATCTAACAACTACAAAAGCCAATTTCTAGCAAATATGAGTCATGAGTTACGGACACCAATGGCTGCGGTGATTGGACTGTTGGACATTCTTATGTGTGATGATTGCATAACAAATGAGCAGTATGCTACAGTTTCCCAGATTCGGAAATGCTCAACAGCTCTACTCCGGCTACTAAACAACATATTGGACTTGAGCAAGGTTGAATCTGGAAAATTAGTGCTGGAAGAAGCTGAGTTTGACCTGGGACGGGAACTTGAAGGTCTTGTCGATATGTTTTCTGTGCAGTGCATTAACCACAACGTGGAGACTGTGTTACATCTTTCTGATGATATGCCGAGATTAGTTCGGGGAGACTCTGGTAGAGTTGTTCAAATATTTGCAAATTTGATAAGCAATTCTATCAAGTTTACGGCATCTGGTCACATTATTCTTCGCGGGTGGTGTGAGAGCTCAAGTGCTTTAAATGATGGTGGGAAGTTTTCTTTTGATCAGAAGAGATCTCGGTTTCCCAGTCGAATGAAACTTAAGCAACAGGGACATCATATGAGAAGCACATACAAGGAGAATAAAATGGCTCTCTGGTTTGAAGTTGATGACACAGGGTGTGGAATTGATCCGAGCAAATGGGAATCTGTCTTTGAAAGCTTTGAGCAAGCTGACCCGTCAACGACCCGAACGCATGGAGGCACGGGTCTTGGACTATGTATTGTCCGAACTTTGGTTAAGCAGATGGGGGGAGAAATCAAGGTTGTGAAGAAGGATGGTCTAGGAACTCTAATGCAATTCTACTTGGTCCTAAGCACACCAAAGGATGCCTTGGAGCAACGCTGTCAAATAGATTTTTCAGAGCACAATATGGTGTTATTGCTCGCTGTAAGAGGGAGCATGAGTAGATTGATCATGTCCGAATGGCTTCATAAAATTGGAGTGCTAACTGTTCAAGCATCCGAGTGGAATGGTTTGACAGTAATTCTTCAAGAACTATTCCAAGGAAGAAATCATGGATCTCTGACTGGATCTTTCGGAACTGAATCATTCGACATTCAAGACGTGAGAAGTCGCATCTTCATCACTTTTGTTGACGTTGGGCTACTTGACTTGGGCACAGATATATGGAAGGAACAACTTTACTTCCTGGATAGATACTCGGGAAAGACTAAGTTTGCGTGGATGTTGAATCACGATACCTCCAAGGTGGTAAAGATGGAGCTTCGGAGGAAAGGGCACTTGTTAATGATCAACAGACCTCTGTACAAGGCGAAAATGATTCAGATTCTGGAAGCTGTGATGAAGGAAGAAAATGATGAACACTCAAGAAGAAGTTTGAATTCTTTGCAATCTTTATCGAAGGAAGGCAACTTCTACGAATGCCTCGAAATTGATTCCACTCATTTTGATAACTGCAGCTCGGACGATTCTGATGTACCCAAATCGGGTAGTTCGAACCCTAAATGTTCATTTCAAGTTGGAGAAAAACAAAGAGATGGGATTACAAAGCCATGCACGTCAACTTATCAGAAAGGCAACAGTTTTCTAGTAGAATCAACTACTGTATATTCAAAGGAAAGTGTGCCCATTTCATCAGCAAATTCTGAATGTCAAGAACAGAATTTAAAGAAAGAAGAAGGGGAATTGAATTCTCGATACGAGCCCCGTCAGAAATCTCTCGAAGGAGTACGAATTCTACTTGCAGAAGATACACCAATTCTCCAAAGAGTGACGACTAAAATGCTCGAAAAAATGGGAGCTGAAGTTGTTGCGGTGGGAGATGGAGTGCAGGCAGTAGATGCAATATCATCGGTGGTAGAAGTCGAAGAAAATGGCAGGGAATCTTCGACCAAAGTCGGGGATGCAGATGCCACCCCATATGACTTGATCTTAATGGACTGTCAAGTAAGAACCACAAACAATCTCCTTTTATTTACGTTTCGGATTTCTTACAAAGTTGTGTTTTTGTGCTTGGAATTTCAGATGCCAAAGATGGATGGATACGAAGCGACGAGAGTAATCAGGAAATCGGAAGCCGGAAGCAGGTTTCACATTCCGATCGTTGCTTTGACGGCTCATGCCATGTCATCAGACGAAGCAAAGTGCTTGGAAGTAGGGATGGATGCTTATTTGACAAAGCCAATTAACTACAAGTTGATGGTCTCCACCATTCTTTCTCTCACTAAAAGAACACCTTCCCTTCCCACCTCCCAAGGATGA 5316 43.15 MVSEARFFLPNSFSMSYPNPNNRNSLYPQVIQTNPDAPPPRISRSDLNPPTSSSSNLYPTIDMKDLVENLFPDRDDCHNPDPIPPSAPPVATEDVIFKISGAILNLIDRNYSVELACGDFSIVLLRQGENVIAVLARVADEIQWPLTKDEVAVKLDESHYFFSLRALKKEDSSSDSDSSDEEGGRRNDQGSENMLNYGLTIASKGKEKSLKELDGILSQYSSFAVQKVSDKAKKGEALDVSLAKEMSPADLKSEKKKELMEGKCAAYWTTLAPNVEDYSGTAAKLIAGGTGQVIKGILWCGDVTVERLKWGNEVMKKRMGPKSEVEIDPETLKRIKRVKRVTKMTEKVANGVLSGVIKVSGFFTSSVATSKVGKKFFGLLPGEIVLASLDGFSKVCDAVEVAGKNVMSTSSTVTTELVSHRYGEKASHATNEGLDAAGHAIGTAWAAFKIRKALNPKSVVKPSTLAKSSIKAGAADLKAKSSNPTDLQIYTLINDVFFKSKASDGIIELKIPLSGNLFKSVYLFLKFTHHVFLSFYKTFKVDPYKLIHLNSHSIKYNLMGTSPRRVFDRIACMATILRSKSPRGRRLFHRDVEQQELQQASTLCLSSCYSVFVARLAIMVMLAILIGLLTILTWHFTKIYTAESLNSLAYGLRHELLQRPILKMSSILNSTSEITTAQVKLLEYVIRKYDKPATQAQEVELYESMKAVTWALFASEKALDAITINYRNGFVQAFHRDHSSNNTFYIYSDLTNYSICSTESYNLSRLPLDQGWSDHPIHGNLSAIWYQEPLDPVSGVKIGKSRSIPPEDLINIAGISQVPYGVASWDVTVSKYMDSPLLSAALPVSDPLNESIIAVVGVTTALSSVGQLMKELVEYHSGHIYLTSQEGYLLATSTNAPLLTKTIKGPKLTMAVDSEDDSIRLGAEWLQKTYGYNFPPNHEVHAENVKLGHQQYYIDSFFLNLKRLPIVGVVIIPRKYIMGKVDERAFKTLVILISASLCILVIGCICIFILTNGVSKEMKLRAELISHLDARRRAEASNNYKSQFLANMSHELRTPMAAVIGLLDILMCDDCITNEQYATVSQIRKCSTALLRLLNNILDLSKVESGKLVLEEAEFDLGRELEGLVDMFSVQCINHNVETVLHLSDDMPRLVRGDSGRVVQIFANLISNSIKFTASGHIILRGWCESSSALNDGGKFSFDQKRSRFPSRMKLKQQGHHMRSTYKENKMALWFEVDDTGCGIDPSKWESVFESFEQADPSTTRTHGGTGLGLCIVRTLVKQMGGEIKVVKKDGLGTLMQFYLVLSTPKDALEQRCQIDFSEHNMVLLLAVRGSMSRLIMSEWLHKIGVLTVQASEWNGLTVILQELFQGRNHGSLTGSFGTESFDIQDVRSRIFITFVDVGLLDLGTDIWKEQLYFLDRYSGKTKFAWMLNHDTSKVVKMELRRKGHLLMINRPLYKAKMIQILEAVMKEENDEHSRRSLNSLQSLSKEGNFYECLEIDSTHFDNCSSDDSDVPKSGSSNPKCSFQVGEKQRDGITKPCTSTYQKGNSFLVESTTVYSKESVPISSANSECQEQNLKKEEGELNSRYEPRQKSLEGVRILLAEDTPILQRVTTKMLEKMGAEVVAVGDGVQAVDAISSVVEVEENGRESSTKVGDADATPYDLILMDCQVRTTNNLLLFTFRISYKVVFLCLEFQMPKMDGYEATRVIRKSEAGSRFHIPIVALTAHAMSSDEAKCLEVGMDAYLTKPINYKLMVSTILSLTKRTPSLPTSQG 1771
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 16103551 16119122 + Bpe001412.1 Bpe15g00478 116157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00478 1771 ProSiteProfiles Response regulatory domain profile. 1596 1760 IPR001789 GO:0000160
Bpe15g00478 1771 MobiDBLite consensus disorder prediction 1508 1524 - -
Bpe15g00478 1771 Pfam Response regulator receiver domain 1689 1754 IPR001789 GO:0000160
Bpe15g00478 1771 Gene3D - 1108 1307 IPR036890 -
Bpe15g00478 1771 PANTHER TWO-COMPONENT HISTIDINE KINASE 1689 1761 - -
Bpe15g00478 1771 MobiDBLite consensus disorder prediction 24 58 - -
Bpe15g00478 1771 Pfam Senescence domain 285 470 IPR009686 -
Bpe15g00478 1771 CDD HisKA 1041 1102 IPR003661 GO:0000155|GO:0007165
Bpe15g00478 1771 MobiDBLite consensus disorder prediction 1505 1525 - -
Bpe15g00478 1771 MobiDBLite consensus disorder prediction 171 188 - -
Bpe15g00478 1771 SMART HisKA_10 1040 1106 IPR003661 GO:0000155|GO:0007165
Bpe15g00478 1771 Gene3D - 1028 1107 - -
Bpe15g00478 1771 CDD REC_hyHK_CKI1_RcsC-like 1597 1756 - -
Bpe15g00478 1771 SMART HKATPase_4 1153 1304 IPR003594 -
Bpe15g00478 1771 SUPERFAMILY CheY-like 1594 1762 IPR011006 -
Bpe15g00478 1771 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 1028 1107 IPR036097 GO:0000155|GO:0007165
Bpe15g00478 1771 PRINTS Bacterial sensor protein C-terminal signature 1247 1257 IPR004358 GO:0016310|GO:0016772
Bpe15g00478 1771 PRINTS Bacterial sensor protein C-terminal signature 1229 1243 IPR004358 GO:0016310|GO:0016772
Bpe15g00478 1771 PRINTS Bacterial sensor protein C-terminal signature 1264 1282 IPR004358 GO:0016310|GO:0016772
Bpe15g00478 1771 Gene3D - 1573 1762 - -
Bpe15g00478 1771 SMART REC_2 1595 1756 IPR001789 GO:0000160
Bpe15g00478 1771 MobiDBLite consensus disorder prediction 171 192 - -
Bpe15g00478 1771 MobiDBLite consensus disorder prediction 24 39 - -
Bpe15g00478 1771 PANTHER TWO-COMPONENT HISTIDINE KINASE 1588 1669 - -
Bpe15g00478 1771 PANTHER TWO-COMPONENT HISTIDINE KINASE 559 1563 - -
Bpe15g00478 1771 Pfam His Kinase A (phospho-acceptor) domain 1041 1106 IPR003661 GO:0000155|GO:0007165
Bpe15g00478 1771 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1153 1303 IPR003594 -
Bpe15g00478 1771 PANTHER OSMOSENSOR HISTIDINE KINASE 1689 1761 - -
Bpe15g00478 1771 PANTHER OSMOSENSOR HISTIDINE KINASE 1588 1669 - -
Bpe15g00478 1771 PANTHER OSMOSENSOR HISTIDINE KINASE 559 1563 - -
Bpe15g00478 1771 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1095 1301 IPR036890 -
Bpe15g00478 1771 ProSiteProfiles Histidine kinase domain profile. 1047 1304 IPR005467 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00945 Bpe-Chr5:22382722 Bpe15g00478 Bpe-Chr15:16103551 1.44E-09 dispersed
Bpe14g00730 Bpe-Chr14:5663226 Bpe15g00478 Bpe-Chr15:16103551 3.66E-41 dispersed
Bpe15g00478 Bpe-Chr15:16103551 Bpe13g01088 Bpe-Chr13:16416908 1.54E-29 dispersed
Bpe01g00557 Bpe-Chr1:3614054 Bpe15g00478 Bpe-Chr15:16103551 1.28E-57 transposed
Bpe05g00284 Bpe-Chr5:15997271 Bpe15g00478 Bpe-Chr15:16103551 1.01E-167 transposed
Bpe13g00409 Bpe-Chr13:11790896 Bpe15g00478 Bpe-Chr15:16103551 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22581 PF06911 Senescence 1.20E-44 No_clan Bpe TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00478 - - cmo:103490686 1691.4