Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00498 ATGAAGAAGATGATTGACAAGGAAATGTCCAAACATTCAAATACCAGAAAAAATGCACCGAACATTGTAGCTCGTCTGATGGGAATGGAGATATTGCCATCAGATATGAAACCGGAAACTCAGTTGAGAGAGAAACAAAATGAAGGTACTTTTTTAAGCAAAGAAAGGATTGAAAGGTGCTCAAATGGTCCTATACTTTCCCACTTGAATTCGCCCATGCATATGGAACTCCTTTCACCATCTAACCATAATTGGGACAGAAAATCCTGTCAGTGGAATAAAAACTATAAGATTGGAAATCCAAGACGTCGAGAACATCCTCAAGAAGAGGAACTTCAGAAGTTCAAGAAGGAATTTGAAGCATATCAGGGAGCAAGAATTAGGGAATGTTCTAGGGTTCTTGAACTTGGTAGTATTAACAGACAGTTACTTGCTCAGAAAGACCTCGACAAGGTAAAGATAGCAGTCACTACAAAATCCAGGAGACTCACGAGTCAGAAACCATTAGAACCGAAGAATTCCATACCGCAAGTAAGATCATTTGGACAATCTGATTTGCAAGTTCATGGTAATAAGATGAATTTGTCCCCATTTGAAAACAAGAAAAGTTATTTTATGAGAAATAAGTCTAACCATGAAGATACTGAACAGCGGTTCTTGACGAGTTTTGATCAAAAGATGATACCCTCATCTCCCTCAAGGATAGTTATCTTGAAGCCTGGTCCTGATCGGATATGCCATCTCAAAGAAATTTGTGTTAGTTCATCAGGGAATTTAAGTGAAAGAAATAATATACAAGACTTTCTCGAGGAGGTGAAGGAGCAGCTGAAGCGGGAATTGCATGGAAGAACAAATCAAAAGGTTTCTGGAATCCGAGGTGGTGGAATTGAGACCCCTTACAGTGAAAAGCCATTTGTTCCAAATCATAGTGCTAAAGATTTAGCAAAACATGCTAGAGAACATGTGCATCAGGAGATTGGCTTAAATTTAATCCAATCTGAATCTACTAGGTCATGCAGAAGTGACATTCAGTTAAATGGACTAGATTCACCTGATTTGTTAAAGAGAAATACTAGGAGACTTTTGTCAGCAAGACTGCGAAAAACGAAAGATGTGGTTACAAACAGTGGGAACCTTAGATTGGCTGTTTCAGATGATGAAACTTTAGTAAAGGAAGTTGAAGATACTGTGAGAGGTGGACGAGAGACAAGCTACATGGAAACTGAAAGACAGGAAGAAGAAATGCAAACAAGATCTTTCAGACATGGAGCAGATAAAAGTGAAGTAGTTCACAGAGAATTGTCCCCTAGGAATCTCGTTAGGTCATTTTCGGCACCAGTATCGGGACCATCATTTGGCAAACTTCTACTGGAGGATAGGAACATTTTAACTGGTGCTCACATCCGGAGGAAGCATGAAGCTAAAGAAAATGTGTTGATAAATATGAAAATCCCAACGAAAGAAAATTTTAATCTCAAAGAAAAAGTTACAAGTTTTAGATATAGTTTCAATCTCAGAAGGAAATTATTTGGCCAAAAGACACAGTCAATGATGGAATCATTGAAGACTGAAGTGAATCCTGCGAAGGACATTATGAGTGGACCAACTGTTCTAATGAACTTTAGAGAGAGGCAGACAAGGTTCATGGAGAATCAAGGCTTCATCCTTAATGTTACGGCAAACAACCACATCGAGGTTTGGGACATAGATAAGAAGCGGTTGTCATATGTACACGCCTTTAAGGATGAGATCACCTCTTTTACCCTCGTGCAAAATGGTCCTTATATGCTCGTCGGAGATTCTTCTGGAAACGTATCAGTTTTAAAGCTTGAGCAGAAATCAGTCAGCATTGTTCAAATGAAATACACGATACCTGTCTCTTCTTCACACGGAAATGCAACAGAAGCTAATGATGGTTTGTCTGTCACCCATTTGTTACTACAACCAAGAGCAGACACTAAGAGATTGCTCATCATATTTTCCGATGGACTAATTGTCTTGTGGGGAATTCGAGAAAGCAAATTGATTTTCACGACGGGTGGAAAATCGATGCTGTCATTGAATCAAGAAGCAAAGAAAGTGACTGCAGCTTGCTGGGGATGCCCTTTTGGAAGCAAAGTCATTGTGGGATATAGCAATGGAGAGATTCTGATATGGAACATTCTTCCAAACCAATGTCCAAACACTGAACTAACATCTGGAACTGGCAATCCAACTGCTCTTCCATCTAAACTCAATCTTGGATATAAGCTCGACAAGACTCCTATATCGTCTCTGAGGTGGGTTTATGCAGACGGGAAAGCAAGTCGGTTATACGTCGTGGGTGCTTCTGAATTTGCTTCCCACAATTCAGTACAGGTAGTCTTGCTGAATGAATACACCGAATCTCGGACAGTCAAGTTGGGACTTCAGTTGCTCGAAACTTGTTCTGACCTGGCAATCATTTCAAGTTTCTGCGAGCAAAGCAAGAACAAACAAGATTTATTACTTCTACTCGGAAAATCAGGCCACATTTACACCTACGACGATTGCTCAATCGAAAAGTATCTTCTACAATGCCGATCTAGTGTGGCACCCTCAATGCCAAAGGAAGTCATGGTGAAGATGCCATTCACTGATTCAACCATTACAGTGGCAAAAATCATCACTGAAAACTCTCTTCTGATAAACAATGCAGATGAGGATTACAGATCACTGGCCAAAAATTTTCCGCCGCTATTTCTTTTTGAGACAAAACTGAGAGATAGTCCTCGATTTCGTGGATTTTCAATGGTTGACAATTTGTACATAACTGGACACAGTAATGGAGCTGTAACTTTTTGGGATGCATCCTGTCCATTTTTTGTGCCAATTTTATCACTGCACCAGCAGAGTGAGGATGATTTTTCCTTAAGTGGAATAGCAGTGACGGCGTTGCATTTTGACGCAAATTCACGGCTGCTGGTATCTGGAGATCAGAGTGGAATGGTTCGCATCTTCAGGTTACGACCCGAATCATTTGTAGTAGACAACAGTTTTATGCCTTTACAAGGAAGTCTGAAGAAGAAGAACATTGTCGAAAGTGTTAATCTTGTAAAAGTTGGTGGTTCGATTCTTGTAATGGACATCAACCACAGTTCAACACACCTTGCGGTCGGATCTGATAAAGGAATTATTGCGGTAATCGACATCAAAGAGTCCAACATAATATATCAAAAGCATATTGCTAGTGGATTGAGCACGGGCATAGTTTCTGTGCATTTTGAACACTGCTCTTTGCACGGTTTCGAGAAAAAAATTCTCGCTGTTGCTACGAAAGACTCATCGATTTTTGCTCTCGACAATGACACTGGAAGCACTTTAAGTTCAGGCATGATTTCCCCAAAGAAACCCTCTAGAGCTCTATTCATGCAGATTTTAGGTGAACAAGATAGCTCAGGTGCTCAAGTGAGTAACTCAGCAAACCAGTTGTCGGTGTTGCTCTGTTCTGAGAAAGCTGCTTATGTCTACTCATTCACTCATGCAATTCAGGGAGTTAAAAAGGTGCAGTACAAGAAGAAATTTCAATCCTCTTGTTGCTGGGCATCTACATTCTACAGTCCTTTTGGTGTTGGCCTCGTACTCCTTTTCAATAATGGCAAAACCGAAATCAGGTCCTTACCAGAACTCTCTCTTGTGAAGGAGACATCATTTGGAGGTGTGACATACTCAGCTTCAAACACTGTGATGTGTTCTTCAAGACAAGGAGATCTTGTTCTGGTGAATAGTGATCAAGAATTATTTGTTGTCTCAGTATTGATCCGTAAGGAAATTTTCAGGCTTTTGGACTCTATTAGCCACATCTACAGGAGAGATCTGATGCTTTCACATGAGAAGCCCGTGACAGACGCAATCGTTCCGAAGGAAAAGAAAAGAGGTATATTTAACTCTGTGATGAAAGAGGTTACTGGCAACAAAGCAAAGCAAGTAGCTGAAGTGGGAAAAGAAGACAGTGAACAATGTATTGAAGATCTTTCTGTGATTTTTTCAGCCGATAACTTCTCGAGTAGCGTTGAAAATCGTATAAGTCGGGATAACTTGGCAATATTTAATGCAGATGACATTGACCTTGATGATTCTGGAACAAAACATAAAGAGCAGAAGCTGTTCTCCGCTTTAAATAAGCACAAGTTGGCTGGCAAGTTTAATGCATTCAAAGGTCGAAAATTGAAACACATGAACCTCAAGAGCGAGACTAATTCAACCCGGGAAGAAGAGCTGGATGTAAAACAAGAAAGCAAGACTGAATCAATCGATCAAATAAAGAGAAAGTATGGATATGCGTCGTCTGATGTAAGTATTCATCAAGTGTTGGGTGAAGTGAAAAATTATTTATTTTTGCAGGGAATAAACGAAAGAGCTACAGAAATGCAAGGTAGTGCCAAGTCATTTTCATCCATGGCTAGTGAAATGCTCAGAGTTGCTCAACAGGGAAGACGCAACTCTTCCTGA 4470 40.13 MKKMIDKEMSKHSNTRKNAPNIVARLMGMEILPSDMKPETQLREKQNEGTFLSKERIERCSNGPILSHLNSPMHMELLSPSNHNWDRKSCQWNKNYKIGNPRRREHPQEEELQKFKKEFEAYQGARIRECSRVLELGSINRQLLAQKDLDKVKIAVTTKSRRLTSQKPLEPKNSIPQVRSFGQSDLQVHGNKMNLSPFENKKSYFMRNKSNHEDTEQRFLTSFDQKMIPSSPSRIVILKPGPDRICHLKEICVSSSGNLSERNNIQDFLEEVKEQLKRELHGRTNQKVSGIRGGGIETPYSEKPFVPNHSAKDLAKHAREHVHQEIGLNLIQSESTRSCRSDIQLNGLDSPDLLKRNTRRLLSARLRKTKDVVTNSGNLRLAVSDDETLVKEVEDTVRGGRETSYMETERQEEEMQTRSFRHGADKSEVVHRELSPRNLVRSFSAPVSGPSFGKLLLEDRNILTGAHIRRKHEAKENVLINMKIPTKENFNLKEKVTSFRYSFNLRRKLFGQKTQSMMESLKTEVNPAKDIMSGPTVLMNFRERQTRFMENQGFILNVTANNHIEVWDIDKKRLSYVHAFKDEITSFTLVQNGPYMLVGDSSGNVSVLKLEQKSVSIVQMKYTIPVSSSHGNATEANDGLSVTHLLLQPRADTKRLLIIFSDGLIVLWGIRESKLIFTTGGKSMLSLNQEAKKVTAACWGCPFGSKVIVGYSNGEILIWNILPNQCPNTELTSGTGNPTALPSKLNLGYKLDKTPISSLRWVYADGKASRLYVVGASEFASHNSVQVVLLNEYTESRTVKLGLQLLETCSDLAIISSFCEQSKNKQDLLLLLGKSGHIYTYDDCSIEKYLLQCRSSVAPSMPKEVMVKMPFTDSTITVAKIITENSLLINNADEDYRSLAKNFPPLFLFETKLRDSPRFRGFSMVDNLYITGHSNGAVTFWDASCPFFVPILSLHQQSEDDFSLSGIAVTALHFDANSRLLVSGDQSGMVRIFRLRPESFVVDNSFMPLQGSLKKKNIVESVNLVKVGGSILVMDINHSSTHLAVGSDKGIIAVIDIKESNIIYQKHIASGLSTGIVSVHFEHCSLHGFEKKILAVATKDSSIFALDNDTGSTLSSGMISPKKPSRALFMQILGEQDSSGAQVSNSANQLSVLLCSEKAAYVYSFTHAIQGVKKVQYKKKFQSSCCWASTFYSPFGVGLVLLFNNGKTEIRSLPELSLVKETSFGGVTYSASNTVMCSSRQGDLVLVNSDQELFVVSVLIRKEIFRLLDSISHIYRRDLMLSHEKPVTDAIVPKEKKRGIFNSVMKEVTGNKAKQVAEVGKEDSEQCIEDLSVIFSADNFSSSVENRISRDNLAIFNADDIDLDDSGTKHKEQKLFSALNKHKLAGKFNAFKGRKLKHMNLKSETNSTREEELDVKQESKTESIDQIKRKYGYASSDVSIHQVLGEVKNYLFLQGINERATEMQGSAKSFSSMASEMLRVAQQGRRNSS 1489
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 16223024 16238942 - Bpe001431.1 Bpe15g00498 116177

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00498 1489 SUPERFAMILY WD40 repeat-like 968 1269 IPR036322 GO:0005515
Bpe15g00498 1489 SMART WD40_4 570 609 IPR001680 GO:0005515
Bpe15g00498 1489 SMART WD40_4 955 994 IPR001680 GO:0005515
Bpe15g00498 1489 SMART WD40_4 680 720 IPR001680 GO:0005515
Bpe15g00498 1489 SMART WD40_4 1021 1056 IPR001680 GO:0005515
Bpe15g00498 1489 MobiDBLite consensus disorder prediction 287 306 - -
Bpe15g00498 1489 MobiDBLite consensus disorder prediction 399 425 - -
Bpe15g00498 1489 Gene3D - 918 1252 IPR015943 GO:0005515
Bpe15g00498 1489 Gene3D - 544 856 IPR015943 GO:0005515
Bpe15g00498 1489 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 546 1487 - -
Bpe15g00498 1489 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 546 1487 - -
Bpe15g00498 1489 SUPERFAMILY WD40 repeat-like 551 1064 IPR036322 GO:0005515
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00498 - - - jre:109014136 1080.09
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00997 Bpe-Chr3:29479628 Bpe15g00498 Bpe-Chr15:16223024 4.22E-45 dispersed
Bpe15g00498 Bpe-Chr15:16223024 Bpe15g01165 Bpe-Chr15:20496992 9.64E-53 dispersed
Bpe13g00388 Bpe-Chr13:11636328 Bpe15g00498 Bpe-Chr15:16223024 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g1197 Blo04g00862 . . . Bpe15g00498 . . . . . . . . . . . . . . . . . . . . . . . . . . Cone8ag0899 Cone12ag0870 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005820 1 5 1 0 1 1 1 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 1 3 1 39
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe15g00498 Bpe_Chr15 FPKM 0.041667 0.27553 0.129306 0.0 0.0 0.248085 0.191354 0.194836 0.26388 0.279645