Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00501 CTCCTTTTGTCATTTCAATGCCTGGGTGTAACTTTTGGTCAGCTGAGCACTGCTCCACTCTACTTGTTTGCAAGTATTGATACAGTAAATATTGATTCGGAAGACGAAGTTTATGAACATTTCTCCCTTATTTTCTGGACTTTGACCCTCATTTGTCTGCTCAAATATGCTTTTATTGTTCTAAATGCTGATGATGATGGAGAAGGTAGTGGTATTTTTGCTCTCTATTCATTGTTGTGCCGCCATGCGAAGGTTGGTTTGCTTCCAAGCAAAAGGAGTGAAACCGAGGTGATGAGTTATAGTTCAGAATCTCCTCAGATGAAGGTTGCATCAAGGGCCAGAAAAGCCATTGAAAAACACAGATGCTTTCACTATATAATGCTCGTCTTTGCTCTTCTTGGTTGCTGCATGACAATAAGTGATGGAGTGCTTACTCCTGCCATATCTGGTTTGTCACACTTGTGTTCTTTCCTCCCAGATGTAGGGGTTCCTACAGCCTGTGTTATACTGGTATGCCTTTTCATGTTGCAACATTTTGGAACTCATAAGATCGGGATTATTTTTGCGCCAATTATTGCTGTTTGGCTGCTTCTTATCAGTGGACTTGGCATTTATAATATTGCCCTCTACAACCCAGACATAATGTCTGCTGTCTTCCCCAAATACTTGTATAGATTTTTGAGAAAAGCCGACTTTCATCAATGGCGATCCTTGGGCAGTGTCATCCTATGCTCTGCAGGTGGGTCTTCTTTACTCATGTTTTTTCTTCCTTATTCTACTTTTAAATTTTTATCCAAAAATAGCACAATTTTCTTTCAAAACAAGATGATCAATTCAAGCGTAACTATTAATGTGTATAAATGCTCCAATTTTGATTCAGTGTTTAACATTTTGCTTAGTGCAGGAGCGGATGCAATGTTCTCAAATCTAGGCCATTTCTCGAAGAAATCTATTAAGCTGACCTTTATCTGCTTGGTTTATCCTCTTCTTATTCTGTGCTACGCTGGTCAATCTGCATTCATTTCAAAAAACTACAATCTCAAATACTTCAATCATCTCCCTCAATCAGGGGCTGCACGCCACATGTTTGTAGTATTTGCCCTGTTTGCTTCAGCCATTGGAAGCCAAGCTGCAATAACAGCCAGCTTTTCCATCATCAACCAGTGCTTGGCTCTTGGGTGTTTTCCTAGAGTGAAAGTTATTCATACATCGGATAAGATTCATGGGCAGATTTACATTCCTGATGTCAACTGGTTCTTGATGCTTTTCAGCCTCACCGTCACCATTAGTTTCCATAACATTATCAACTTGGGTAGTGCCACTGGATTGGCTATAAGTTCAGGCATGGTTGTAACAACGTGTTTAGCAACAGTTGTTATTGCTACGTACTGGGAGAAGAACTTATCGCAAGCAGCATGCTTTCTGATATATTTTGGATTCCTAGAAACGTTGTATTTGACGGGTGCTCTTCTAAATTTCCATAGAGGAGCTTGGTTTTTGTTTGTTCTTTTAGCACCGTATTTCACAGTAATGATTACATGGCATTACGGGACGAAGAAGAAGTACGAGTATGATCTAGAAAACAAGGTCTCCACAGAATGGCTTACCGATCTTAGCCCTGGCCTCGGAATTGCAAGAGTAGCCGGAATTGGCATCATTCATACTGACGTAGTCAGCGGAATTCCGGCTTTTTTCTCTCACTTCATCGCGAATTGTCCTGCTTTTCATCGAGTTCTGATCCTAGTGTCTTTCAAGACTTTGCCAGTACCTTATCTCCCTTCGAGTCAGCAATATCTTGTTGGCAGAATCGGGCCGAAAGATCACAGGATTTATCGTTGCATTGTTCGATATGGATATCGCGATCATGTCAGCAAACATGTTTTCGAGGAACAAATCATTAGCTCGATCAGAGAATTCATTTCAGTGGAAGAAAATGAATGTGAACCAGTGACATCAAACGAAGGGAGAAGCATGATTGTTATAGGGACTCCATCTCAAGAAGGAAGTGCTCTAGTTTCTTCAAATCACGACAAAAACACAGTCGATGTCGTGAGCTTCTCAGACAATGAACACTCGATGGAGGAAGGTGCTTTTACTCTGGCAAGGAGGAAGAAGACGGTCCAATTTGTGTTGCCACCGGAGAGCCGGACATTGGCGGTGCATGCGAGGGAAGAACTGGAGGGATTAGCAGAGGCAATGGAGAGTGGGACAGCATATTTTCTGGGGAAGACTCATTTCAAGGTACGTGGGGATAACTCTAACATAATGAAGAAGTTGCTTATAATGGCGTATGTTTTCTTGGAAACAAATTGCAGAGAGACTTCTGTAGCTTTAAACGTTCCTCGTGCTGCTGTCTTGGAGGTGGGTATGCTGTATCCAATCTAA 2385 41.59 LLLSFQCLGVTFGQLSTAPLYLFASIDTVNIDSEDEVYEHFSLIFWTLTLICLLKYAFIVLNADDDGEGSGIFALYSLLCRHAKVGLLPSKRSETEVMSYSSESPQMKVASRARKAIEKHRCFHYIMLVFALLGCCMTISDGVLTPAISGLSHLCSFLPDVGVPTACVILVCLFMLQHFGTHKIGIIFAPIIAVWLLLISGLGIYNIALYNPDIMSAVFPKYLYRFLRKADFHQWRSLGSVILCSAGGSSLLMFFLPYSTFKFLSKNSTIFFQNKMINSSVTINVYKCSNFDSVFNILLSAGADAMFSNLGHFSKKSIKLTFICLVYPLLILCYAGQSAFISKNYNLKYFNHLPQSGAARHMFVVFALFASAIGSQAAITASFSIINQCLALGCFPRVKVIHTSDKIHGQIYIPDVNWFLMLFSLTVTISFHNIINLGSATGLAISSGMVVTTCLATVVIATYWEKNLSQAACFLIYFGFLETLYLTGALLNFHRGAWFLFVLLAPYFTVMITWHYGTKKKYEYDLENKVSTEWLTDLSPGLGIARVAGIGIIHTDVVSGIPAFFSHFIANCPAFHRVLILVSFKTLPVPYLPSSQQYLVGRIGPKDHRIYRCIVRYGYRDHVSKHVFEEQIISSIREFISVEENECEPVTSNEGRSMIVIGTPSQEGSALVSSNHDKNTVDVVSFSDNEHSMEEGAFTLARRKKTVQFVLPPESRTLAVHAREELEGLAEAMESGTAYFLGKTHFKVRGDNSNIMKKLLIMAYVFLETNCRETSVALNVPRAAVLEVGMLYPI 794
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 16258552 16262532 + Bpe001434.1 Bpe15g00501 116180

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00501 794 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 251 IPR003855 GO:0015079|GO:0016020|GO:0071805
Bpe15g00501 794 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 288 792 IPR003855 GO:0015079|GO:0016020|GO:0071805
Bpe15g00501 794 Pfam K+ potassium transporter 5 251 IPR003855 GO:0015079|GO:0016020|GO:0071805
Bpe15g00501 794 Pfam K+ potassium transporter 297 621 IPR003855 GO:0015079|GO:0016020|GO:0071805
Bpe15g00501 794 PANTHER POTASSIUM TRANSPORTER 1 251 - -
Bpe15g00501 794 PANTHER POTASSIUM TRANSPORTER 288 792 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00501 K03549 kup; KUP system potassium uptake protein K12236 zju:107419568 862.062
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe07g01089 Bpe15g00501 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe15g00501 Bpe-Chr15:16258552 Bpe11g01554 Bpe-Chr11:11559883 0 dispersed
Bpe15g00501 Bpe-Chr15:16258552 Bpe15g01222 Bpe-Chr15:20832536 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g164 Blo04g00859 . Bda06g00868 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bda14g01150 Bpe07g01089 Bpe15g00501 . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0021446 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe15g00501 Bpe_Chr15 FPKM 16.656303 18.52136 23.279476 23.152252 17.640396 16.613396 18.714594 16.618372 15.552071 14.153415