Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00515 GTCATGGTGGATTCACCGGGAAGTCCACAAACCGGTGGCCGGTCATCCTTGATGGACAGCCTCTTGGGGTTGCTTAGGATCCGAGTCAAACGCGGCATAAATCTGGCCGTTCGTGACGTCCGAAGCAGCGATCCATACGCCGTCAAATTAATGCAGAAATTGAAGACCCGTGTGATCAAGAAAGATGTTAATCCAGAATGGAACGAAGATCTAACTCTCTCTGTCACTGACCCTAGTCTTCCGGTCAAGCTGGACACATTTTTAAATAATACGATGACGTTTCGTACAGTGTACGACCACGACACGTTTAGCATGGACGACAAAATGGGGGAGGTGGAGTTCGACATCCGACCGTATATAGAGGCATTGAAGATGAACTTGGGAGGGCTTCCGAGCGGGACAATAATCTCGAGAGTTTCACCGAGCAGACAAAATTGCCTCTCGGAAGAAAGCTCAATTTTATGGAAAGATGGGAAAGTAGTTCAAGACCTTTGTCTTAGGCTCCGAAACGTCGAATGTGGCGAAGTAGAACTTCAATTGCAATGGATTGACCTTCCCGGATCCAAAGGCTTATAA 576 47.57 VMVDSPGSPQTGGRSSLMDSLLGLLRIRVKRGINLAVRDVRSSDPYAVKLMQKLKTRVIKKDVNPEWNEDLTLSVTDPSLPVKLDTFLNNTMTFRTVYDHDTFSMDDKMGEVEFDIRPYIEALKMNLGGLPSGTIISRVSPSRQNCLSEESSILWKDGKVVQDLCLRLRNVECGEVELQLQWIDLPGSKGL 191
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 16350028 16350781 + Bpe001448.2 Bpe15g00515 116194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00515 191 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 15 124 IPR035892 -
Bpe15g00515 191 ProSiteProfiles C2 domain profile. 5 129 IPR000008 -
Bpe15g00515 191 CDD C2_ArfGAP 22 174 - -
Bpe15g00515 191 Pfam C2 domain 23 118 IPR000008 -
Bpe15g00515 191 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4-LIKE 11 190 - -
Bpe15g00515 191 Gene3D C2 domain 19 189 IPR035892 -
Bpe15g00515 191 SMART C2_3c 24 128 IPR000008 -
Bpe15g00515 191 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 11 190 IPR044562 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe15g00515 Bpe-Chr15:16350028 Bpe06g00270 Bpe-Chr6:13614370 5.95E-07 dispersed
Bpe02g01998 Bpe-Chr2:21710800 Bpe15g00515 Bpe-Chr15:16350028 1.86E-70 transposed
Bpe07g01048 Bpe-Chr7:15972984 Bpe15g00515 Bpe-Chr15:16350028 2.19E-86 transposed
Bpe10g00983 Bpe-Chr10:15275567 Bpe15g00515 Bpe-Chr15:16350028 8.78E-63 transposed
Bpe11g01867 Bpe-Chr11:15041547 Bpe15g00515 Bpe-Chr15:16350028 1.18E-56 transposed
Bpe12g00697 Bpe-Chr12:12541503 Bpe15g00515 Bpe-Chr15:16350028 4.69E-82 transposed
Bpe14g00079 Bpe-Chr14:1274072 Bpe15g00515 Bpe-Chr15:16350028 9.35E-80 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00515 - - mnt:21400368 298.901