Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00518 ATGGCTACTTCGGTCGATCCTCTCGTCGTCGGAAGAGTTGTCGGCGATGTCGTAGACATGTTTGTTCCGGTGGCTAACCTGTCTGTCAACTTTGGTTCTAAGCACGTGACTAATGGCTGTGATATCAAGCCCTCCCTGGCTGCTGATCCGCCCAGGTTTATCGTTCCTGGTCATTCGGATGAGCTCTACACTCTGATAATGACTGATCCAGATGCTCCGAGCCCTAGTGAACCCCATATGCGAGAATGGGTGCATTGGATAGTGGTGGATATACCTGGAGGAGCAAGTCCAAACAGAGGGAAGGAGATTCTGCCGTACATAGGGCCACGCCCACCCATCGGAATACATCGCTACATTCTCCTTCTGTTCAAGCAAAAGGCTCCCCTGACCCTAGTCAACCAGCCGCCGCCGTCTCGGGCCAACTTCAACACCCGCCACTTCACCCGCCACCTGGATCTAGGCCTCCCAGTAGCCGCAACCTACTTCAACTCTCAGAAGGAGCCCGCCGCCAAAAAGCACTAG 522 54.41 MATSVDPLVVGRVVGDVVDMFVPVANLSVNFGSKHVTNGCDIKPSLAADPPRFIVPGHSDELYTLIMTDPDAPSPSEPHMREWVHWIVVDIPGGASPNRGKEILPYIGPRPPIGIHRYILLLFKQKAPLTLVNQPPPSRANFNTRHFTRHLDLGLPVAATYFNSQKEPAAKKH 173
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 16362933 16363968 + Bpe001451.1 Bpe15g00518 116197

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00518 173 Pfam Phosphatidylethanolamine-binding protein 39 155 IPR008914 -
Bpe15g00518 173 PANTHER BNAA06G12320D PROTEIN 1 172 - -
Bpe15g00518 173 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 1 172 IPR035810 -
Bpe15g00518 173 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 63 85 IPR001858 -
Bpe15g00518 173 CDD PEBP_euk 25 164 IPR035810 -
Bpe15g00518 173 Gene3D - 2 173 IPR036610 -
Bpe15g00518 173 SUPERFAMILY PEBP-like 3 166 IPR036610 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00518 - - - mnt:21400397 271.166
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00207 Bpe-Chr8:1161044 Bpe15g00518 Bpe-Chr15:16362933 1.91E-40 dispersed
Bpe15g00518 Bpe-Chr15:16362933 Bpe14g00037 Bpe-Chr14:577271 2.01E-13 dispersed
Bpe15g00518 Bpe-Chr15:16362933 Bpe04g01535 Bpe-Chr4:21721351 6.38E-58 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g228 Blo04g00843 . . . . . . . . Cmo18g00048 . . . . . . . . . . . . . . . . . . . . . Cone2ag0756 . . . Lsi02g00223 . . . . . . . . Bpe15g00518 Bma03g00909 . Sed01g1758 . . . Cma18g00062 . Car18g00054 Cpe09g01122 . Bhi08g01279 Tan05g2206 Cmetu04g3049 Lac10g0278 Hepe07g2363 . . Cla04g01058 Cam04g1100 Cec01g1615 Cco01g1660 Clacu04g1125 Cmu04g1109 Cre01g1409 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002658 1 2 1 2 1 2 3 2 1 1 2 2 2 1 2 3 2 2 2 2 2 2 2 3 2 2 2 2 2 1 56
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe15g00518 Bpe_Chr15 FPKM 26.590942 28.274256 21.909847 20.539755 32.547611 34.507355 34.914207 36.385586 39.408974 44.145042