Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00525 ATGGCTGAATTTTCTTCAGAGCTGCAGAGTTTCAAGCTCTCTTTTCCTTTCATGGAAGCTGATCCAAACGTGGAGCCAATGAACCAAGTAGAAGCTCTCAACCCTAGTCTTTTCCATGACTTCCAAAACATGATCAATTTCCACCCCTTTCTTTCTTTCACAAATGATGTTTCATTTTCCCATCCTACTCCTGAATTCTCCGAAAATATATCGGAAAACTTTCCGAGCTCGATCCGACAGTCGACCGAGTTCATCGTACCGGCTTCCGAACGGACTGTCTTTGAAGAAAACGAGAGAAAAAAGAGGAAATCTATAAAAGTAGCAGAAAACAGCTCTACGAAATCATGTGTTCAAGGCTCTGGAAGAGGAAAGAAGGCGAAGAGAATTGAGAAGGAAGAAGAAGAAAAGCCCAAAGAAGTCGTTCATGTTAGAGCTAAAAGAGGTCAAGCTACAGACAGTCACAGTATAGCAGAAAGAGTGAGAAGAGGAAAAATCAATGAAAGATTAAGACACTTGCAAGATATCGTTCCTGGTTGCTACAAGACGATGGGAATGGCAGTGATGTTAGATGAAATAATTAATTACGTGCAGTCTTTGCAGAATCAGGTTGAGTTTCTGTCAATGAAGCTCACTGCAGCAAGCTCTTTTTATGACTTCAACTCAGAAACAGATGCCTTCGAAACATTGCAGGTGGGATCTTGCTTCCGCTTTGAAAAACAGAAAACAATTTTATAA 735 40.68 MAEFSSELQSFKLSFPFMEADPNVEPMNQVEALNPSLFHDFQNMINFHPFLSFTNDVSFSHPTPEFSENISENFPSSIRQSTEFIVPASERTVFEENERKKRKSIKVAENSSTKSCVQGSGRGKKAKRIEKEEEEKPKEVVHVRAKRGQATDSHSIAERVRRGKINERLRHLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAASSFYDFNSETDAFETLQVGSCFRFEKQKTIL 244
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 16408181 16409270 - Bpe001458.1 Bpe15g00525 116204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00525 244 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 149 199 IPR011598 GO:0046983
Bpe15g00525 244 SMART finulus 155 205 IPR011598 GO:0046983
Bpe15g00525 244 MobiDBLite consensus disorder prediction 111 136 - -
Bpe15g00525 244 Pfam Helix-loop-helix DNA-binding domain 153 200 IPR011598 GO:0046983
Bpe15g00525 244 Gene3D - 146 217 IPR036638 GO:0046983
Bpe15g00525 244 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 147 217 IPR036638 GO:0046983
Bpe15g00525 244 CDD bHLH_AtBPE_like 140 224 - -
Bpe15g00525 244 PANTHER TRANSCRIPTION FACTOR BEE 1 2 230 - -
Bpe15g00525 244 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 2 230 IPR024097 GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe12g00693 Bpe15g00525 CCT
Bpe12g00693 Bpe15g00525 ECH
Bpe07g01037 Bpe15g00525 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe12g00693 Bpe-Chr12:12509573 Bpe15g00525 Bpe-Chr15:16408181 4.81E-50 dispersed
Bpe13g01295 Bpe-Chr13:18099896 Bpe15g00525 Bpe-Chr15:16408181 1.78E-40 dispersed
Bpe15g00525 Bpe-Chr15:16408181 Bpe14g01027 Bpe-Chr14:7638472 2.31E-36 dispersed
Bpe15g00525 Bpe-Chr15:16408181 Bpe02g02301 Bpe-Chr2:23717586 2.47E-36 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22583 PF00010 HLH 7.40E-06 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00525 - - zju:107418798 249.98