Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00528 ATGGGAGTTCAGCAAATGGATGGAGCTGACGGTGATGGAGAGGGAGTGCTGTGCAATTCGATTAATAATAACGTAGATTCTACTCCGTCTGCCTCATCATGTGAGTGGTGTTTGACGAGCTCGGAGCCAATGTCTCCCATTCTTATTTTCTTGTTCTTCCACAAAGCGATTCGCAATGAGCTTGACGAGCTGCACCGATTGGCTATGGCTTTTGCCACCGCCCGTAGAGGCGACATTGGGCCGCTTCGGGAGCGGTACCAGTTTATAAGATCGATTTATAAGCACCATTCCAATGCTGAAGACGAGTTACGCATTTTCTTGATGAGGACGCTTAATAATAAACACACATATTTTGTTTTTGTATCATCCCAATCTTACTATATTACGGAACATCATGTGCAGGTAATCTTTCCAGCACTTGATGTACGCATGAAAAATGCAGCGCAAACGCATTCCCTTGAACACAAGGGTGAAAGTAATCTTTTTGATCACCTGTTTGAGCTGTTCAATTCATTTAAGCCTGATGATGAAACTTTTCAAAGGGAATTTGCATCCTGTACATGGGCCCTTCAAACATCACTTAGGCAGCACATGGCCAAGGAAGAACATGTATTTCCAATGCTTATTGAGAATTTCTCTCATGAAGAACAAGCATCTTTGGTCTGGCAGTTTTTATGCAGCATTCCAGTGGATACGATGGCTGAATTCCTTCCTTGGCTTTCTTCATCTATTTCATCCAATGAATGTCAAGATTTGCACAAGTGTCTAAGAAAAGTAGTTCCTCAGGAAAAACTTCTTCAAAAGATCATTTTCACATGGATGGGAAGCAAAGATATTGCCAACGTCGTTGGAAGTTGTGTACATGATTCTTGTGCCTGTGTGGATGTTGTGGCCAAGAAATCAACTCATCAAACATATGAAGTTAACTGGACACGTGTATCAACCACAACTGGGAAAAGGAAATCTTTTTACTCTGATCCAGACGCTTTTGATAGCATTGATAGACATCCAATTAACGATATATTACTTTGGCACAATGCCATAAAAAATGAGTGGAAGAAGATATCTCAGGAGGTTGAGAAGATGATGCTTTCTGGAGGTTTCACGGATATATCAGCATTCATTGAAAGGTTGCAGTTCATTACCGAAGTTTGCATTTTTCACAGTGTTTCTAAGGACAGGGTCATATTTCCTGCAGTAGATGGAGAATTCTCTTTTCTTCAAGAACATTCCGAAGGAAAAAATCAGTTTAATAAGTTAAGATATTTGATGGAAAAAATTAAGAATGTAGGTGAAAATTCTTCTGCATCTGAACTTTACAGGGACTTGAGTTCTCATGCTATGCTAGTACTGGATGCCATAGAGAGGAACTTTGATGATGATGACATTCAGGTCATTCCACTGGCTCGAAAGGTATTCAGCTTTAAAACACAAAGAGAACTTTTGTATCAAAGCTTGTGTACGATGCCCTTGACTTTGATTGAACGTTTTTTACCATGTTTTGTTGGATCATTACCTGGTGCTGAAGCCAGAGATTTTCTTAAAAACATAAAATTGGCAGCTCCACTAACAGACACTGCTTTAGTGGAACTCTTTTCTGGTTGGGCTTTCAAGGCTCGCGATAAACGTCCATGCTTGTCTTCAAAAGGAATTGATTGCTACTATACTGGAAATGAATTTATGCAATCATTATGTTCATGTGCTTCTTCACTTGTTGCAAGAGAAAAAGCCAGAACTTCTCCCAGCATCACAGGGTCAAATAAACTATGTTTATCAATTTTGTGCGCAAGATGTAGAGGCCTTAATGCATCTGACAGTGTTAGTATCTCACGACTATTTTGTGATGATAAATCTTGCCGTGTCTCAGGTTTTGGAGTAAACACCAATAACCTGGGTTTAAGTTCTCTTTTTACAGTTAAGTCTTTCCGATCCTTGTCTTCCAGCTTTTGTGCCCCATCTCTTAATTCCAGCCTTTTCTTATGGGAAACAGATGATGGCCCTTCTGATGGTGGATCTATAGGGCGGCCAATTGATACTATTTTCCAGTTCCATAAGGCCATCAGTAAAGATTTAGAATACTTAGATGTTGAATCTGGAAAACTAAGTAATTGTGATGAAATATTTCTTAGGCAATTCGTTGGAAGATTTCTCCTGTTGTGGGGGTTGTACAGGGCACACAGTAATGCAGAAGATGAAATAGTGTTTCCTGCGCTGGAATCCAAAGAGGCTCTACATAATGTGAGCCACTCCTACACGCTGGACCATAAGCAGGAGGAAAATTTATTTGAAGATATCGCACGTGTTCTCTCTGAGCTTTCACTACTTCATCAAATTTCGCAGGGGTACCTTTTGGACGAGGATTTAGATAGAAGAGGGTCGAGTAAAATTATTGAAAAGTATAAAGAGCAGGCTACAAAACTTCAAGGAATGTGCAAATCAGTGAGAGTGACTCTGGATCAGCATATTTTTAGGGAAGAACTTGAGTTGTGGCCATTGTTTGACATACATTTCTCTGTGGACGAGCAAGACAAACTTATTGGTCATATAATTGGGACAACAGGAGCTGAAGTTCTCAAATCTATGCTACCATGGGTAACCTCTGCACTGACTCTGGAGGAACAGAATAAAATGATGAAAACTTGGAAGCAAGCCACCAAAAACACGATGTTCAATGAGTGGCTAAAAGAATGTTGGAATGGAAGCCTGGTTTCAAAATCACAAACTGAAACATTTGAAGCTAAAATTTCTCAAAAAGTCCCTGAGATTCAAAGTTTGGAACAGAATGATCATATGTTCAAACCTGGTTGGAAGGATATTTTTCGTATGAATGAAAATGAACTTGAATCAGAGATCCATAAGGCTGATCAGGATTTGACTCTTGACCCGAGGAGAAAGGCATATCTCGTCGAGAATCTTATGACTAGTCGCTGGATTGCTGCTCAGCAGAAGTTGCTTCAAGCAGAGGGAGAAACTTCCAACAGTGAAGATGTTCCAGGTCGCTCACCTTCATTTCGAGATCCAGGGAGAGAAGTCTTCGGATGTGAACATTACAAAAGAAACTGCAAACTTCTAGCTGCTTGCTGTGGCAAGTTGTTTACTTGTCGGTTTTGTCATGATAATGTCAGCGACCACTCCATGGATAGGAAAGCAACGTCAGAAATGATGTGTATGCTCTGTCTCAATGTCCAGCCAGTTGGACCAATATGCATTACGCCTCCTTGCAATGGCTTTTCAATGGGAAAATACTATTGCAATATTTGTAAATTTTTTGATGATGAAAGGAGCGTATATCATTGTCCATTTTGCAACTTATGCCGTGTTGGTACTGGTCTTGGGATCGATGTTTTTCATTGTATGACATGCAATTGCTGCCTTGGTACCAAGGCAGTGAACCACAAATGCCTAGAGAAAAGTTTAGAGATAAATTGCCCAATTTGCTGTGATTTTTTGTTCACCTCCAGTGCAACAGTCAAACCTTTACCTTGTGGGCATTACATGCATTCAGCTTGCTTTCAGGCATACACCTGCAGCCATTACACCTGTCCAATTTGCAGCAAATCATTAGGAGATATGGCCGTTTATTTTGGCATGCTCGATGCATTGTTGGCTGCTGAGGAGCTTCCCGAGGAGTTCAAGAATCAGAATCAGGACATACTTTGTAACGACTGTAATGAAAAGGGGACATCGAGATTCCACTGGCTACATCACAAGTGCAGATTTTGCGGCTCTTACAACACTCGCGTAATCAAGCGCGAGAAGAAAAACGTCAGCTGGTGCTCCGCTGCCCAGTGA 3792 40.82 MGVQQMDGADGDGEGVLCNSINNNVDSTPSASSCEWCLTSSEPMSPILIFLFFHKAIRNELDELHRLAMAFATARRGDIGPLRERYQFIRSIYKHHSNAEDELRIFLMRTLNNKHTYFVFVSSQSYYITEHHVQVIFPALDVRMKNAAQTHSLEHKGESNLFDHLFELFNSFKPDDETFQREFASCTWALQTSLRQHMAKEEHVFPMLIENFSHEEQASLVWQFLCSIPVDTMAEFLPWLSSSISSNECQDLHKCLRKVVPQEKLLQKIIFTWMGSKDIANVVGSCVHDSCACVDVVAKKSTHQTYEVNWTRVSTTTGKRKSFYSDPDAFDSIDRHPINDILLWHNAIKNEWKKISQEVEKMMLSGGFTDISAFIERLQFITEVCIFHSVSKDRVIFPAVDGEFSFLQEHSEGKNQFNKLRYLMEKIKNVGENSSASELYRDLSSHAMLVLDAIERNFDDDDIQVIPLARKVFSFKTQRELLYQSLCTMPLTLIERFLPCFVGSLPGAEARDFLKNIKLAAPLTDTALVELFSGWAFKARDKRPCLSSKGIDCYYTGNEFMQSLCSCASSLVAREKARTSPSITGSNKLCLSILCARCRGLNASDSVSISRLFCDDKSCRVSGFGVNTNNLGLSSLFTVKSFRSLSSSFCAPSLNSSLFLWETDDGPSDGGSIGRPIDTIFQFHKAISKDLEYLDVESGKLSNCDEIFLRQFVGRFLLLWGLYRAHSNAEDEIVFPALESKEALHNVSHSYTLDHKQEENLFEDIARVLSELSLLHQISQGYLLDEDLDRRGSSKIIEKYKEQATKLQGMCKSVRVTLDQHIFREELELWPLFDIHFSVDEQDKLIGHIIGTTGAEVLKSMLPWVTSALTLEEQNKMMKTWKQATKNTMFNEWLKECWNGSLVSKSQTETFEAKISQKVPEIQSLEQNDHMFKPGWKDIFRMNENELESEIHKADQDLTLDPRRKAYLVENLMTSRWIAAQQKLLQAEGETSNSEDVPGRSPSFRDPGREVFGCEHYKRNCKLLAACCGKLFTCRFCHDNVSDHSMDRKATSEMMCMLCLNVQPVGPICITPPCNGFSMGKYYCNICKFFDDERSVYHCPFCNLCRVGTGLGIDVFHCMTCNCCLGTKAVNHKCLEKSLEINCPICCDFLFTSSATVKPLPCGHYMHSACFQAYTCSHYTCPICSKSLGDMAVYFGMLDALLAAEELPEEFKNQNQDILCNDCNEKGTSRFHWLHHKCRFCGSYNTRVIKREKKNVSWCSAAQ 1263
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 16437261 16445524 - Bpe001463.1 Bpe15g00528 116207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00528 1263 CDD Hr-like 49 206 - -
Bpe15g00528 1263 CDD Hr-like 678 831 - -
Bpe15g00528 1263 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 39 104 - -
Bpe15g00528 1263 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 131 1255 - -
Bpe15g00528 1263 SMART ring_2 1143 1184 IPR001841 -
Bpe15g00528 1263 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1-LIKE 39 104 - -
Bpe15g00528 1263 SUPERFAMILY RING/U-box 1141 1188 - -
Bpe15g00528 1263 ProSiteProfiles Zinc finger CHY-type profile. 1007 1076 IPR008913 GO:0008270
Bpe15g00528 1263 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1-LIKE 131 1255 - -
Bpe15g00528 1263 Gene3D nmb1532 protein domain like 342 485 - -
Bpe15g00528 1263 Gene3D nmb1532 protein domain like 130 226 - -
Bpe15g00528 1263 Gene3D nmb1532 protein domain like 45 129 - -
Bpe15g00528 1263 Gene3D nmb1532 protein domain like 672 893 - -
Bpe15g00528 1263 Pfam Zinc-ribbon 1190 1247 IPR039512 -
Bpe15g00528 1263 SUPERFAMILY Zinc hairpin stack 1080 1136 IPR037275 -
Bpe15g00528 1263 Pfam CHY zinc finger 1014 1089 IPR008913 GO:0008270
Bpe15g00528 1263 Gene3D - 1213 1257 - -
Bpe15g00528 1263 CDD Hr-like 340 467 - -
Bpe15g00528 1263 ProSiteProfiles Zinc finger RING-type profile. 1143 1185 IPR001841 -
Bpe15g00528 1263 SUPERFAMILY CHY zinc finger-like 1009 1070 IPR037274 GO:0008270
Bpe15g00528 1263 Pfam Hemerythrin HHE cation binding domain 51 208 IPR012312 -
Bpe15g00528 1263 Pfam Hemerythrin HHE cation binding domain 676 832 IPR012312 -
Bpe15g00528 1263 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1136 1187 IPR013083 -
Bpe15g00528 1263 ProSiteProfiles Zinc finger CTCHY-type profile. 1079 1142 IPR017921 -
Bpe15g00528 1263 CDD RING-H2_Pirh2 1142 1185 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe12g00694 Bpe15g00528 CCT
Bpe12g00694 Bpe15g00528 ECH
Bpe07g01039 Bpe15g00528 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe12g00694 Bpe-Chr12:12513117 Bpe15g00528 Bpe-Chr15:16437261 0 dispersed
Bpe14g01145 Bpe-Chr14:8551881 Bpe15g00528 Bpe-Chr15:16437261 3.67E-43 dispersed
Bpe15g00528 Bpe-Chr15:16437261 Bpe05g00846 Bpe-Chr5:21662122 2.22E-48 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00528 K16276 - csv:101215023 1672.52