Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00546 ATGGCGAAGCCTCGCAAACCAAAGACCAGCGGGGATATGAAGCCTGATAACTCCGTCGCTGTTGTTCGTCACCAGAAGCTTTGCCTCTCGATTGACATTGATAAACGTCGTATTTTCGGGTTCACTGAGTTGGAAATTGCTGTTCCAGACATTGGGATTGTTGGTTTGTATGCCGAGAATCTGGAGATTGAGAGTATTTCAGTGGATGGCGAGCCGGCCGAATTTGAGTATTATCCGCATCATCAGCATGTGGAAAAGGACTCTAGGTGGAATTCAGTGTCGTCTCCTAGCTCCGCTGCTGATGCTGCTGGCTCGCTATATTTTTCATCTCTGGAAAGAGAATTGATTCCAAATTTACTTATAAACTGTTGCAAGGCTTACAAGAATGGAAGCGAGCAGCAGGAGCAACTGGTGGTGGAGAATGGGGAGCAAAACGCAAATGAGGCAAAGCAGAATGTAAGGTTGGTGCACATAGACTACTGGGTAGAAAAAGCGAAGGCAGGAATTCATTTCAACAAGAATTCAGTACATACTGATAATCAGATAAGGCGTGCCCGATGCTGGTTCCCGTGCATGGATGATGGCTTACAAAGATGCTGCTATGATATGGAGTTCACAGTTGCCCACGGACTTGTGGCGGTCAGTACAGGAACCTTGCTATATCAGGTTTTGGGCAGAGATGTTCCTCCTTCCAAAACATATGTCTATCGGTTGGACATTCCTGTTAATGCCCAGTTTATATCTTTGGCAGTTGGTTCTTTTGAAATTCTCCCTGATCACCAAATTACCTGCATATCACACATGTGTATGCCCAATAATTTATCGAAGCTTCGTAATACAGTGGAATTTTTCAATAATGCATTCAGCTTATATAAGGATTACCTTTCGGCAGACTTTCCTTTTGAGTCATACAAACAAGTTTTCATAGAACCTGAGATGTCAGTCTCATCATCAAGTTTTGGAGCTTCCATGTGCATATTTAGTTCTCACCTTTTGTTTGATGAGAAAGTTATTGATAAGACAATAGAGACGTGGATCAAACTTGCCTCTGCCTTTGCAAGACAGTGGTTTGGTATATATATTACACCCGAGTCTTCAAATGATGAATGGCTGGTGGACGGTCTTGCTTCTTTTCTAACAGATATGTTCATTGAGAAATACTTGGGAAATAATGAGGCGTGCTACCGAAGATACAAGGCAAATTCTGCAGTTTGCAAAGCAGATAGCACTGGTGCAACTGCCTTGAGTGCATCTTCTTCTTGTAAGGATTTGTATGGGACTCACTGTATTGGGATGTATGGAAAAATACGATCATGGAAAGCAGTGGCGATTCTTAAAATGCTGGAAAAGCAAATGGGATTTGAGAATTTCCGCAAAATTTTGCAGACTATAGTTTCTCGAGCTGAAGATACAACCCTTTCTTCAAAATCTCTCAGTACAAAGGAGTTCCGACAGTTTGCTAATAAAATTGGAAATCTTGAGCGTCCATTCCTAAAAGAATTCTTTCCTCGGTGGGTGGGATCATGTGGCTGTCCAGTGCTAAGAATGAGCTTTTCAAATAATAAGCGAAAGATTGAAATGGTAGTGTTACGGGAATCCACAGCACTGCTTGGTGCAAATGCATCAGATGTAGCTGTCAGCAAAGATCTTGAAAGCAGAAGTGATACTGAGTGGCCAGGAATCATGACTATTCGTGTTTGTGAAATAGAAGGTCTGTATGACCATCCAGTTTTACCATTAAACGGGGAATCTTCACAGTTTTTGGAAATACCATGCTATGCCAAACCTGGGGCTAAACGCCCCCAGAAGACTAAAAAGGGTACAAAACCTGATGGATCTGATGATAATGGTGATATGCCTGCACATAGTTCATTGGATGTACGGTTGAGCATGGAAACCCCTGTGTTGTGGTTGAGGGCAGACCCTGGAATGGAATATCTTTCTGAAATTCATTTTCATCAACCTGTTCAGATGTGGATTAATCAATTAGAGAAGGACAAAGATGTTGTTGCTCAAGCACAAGCGATTGCGACAATGCAGACATTACCACATTTACCATTTGCTGTTGTGAATGGTTTGAACAATTTCCTCATAGATTCCAAGGCCTTTTGGCGAGTTCGAATTGATGCGGCATTTGCATTGGCTGAAACAGCATCTGAGGATAGTGAGACTGCTGGTCTACACAACCTCATAAAATATTATAAAAGCCGGAGGTTTGATGCAAACACTGGACTGCCCAAGCCAAATGATTTCCGCAACTTTGCTGAATATTTTGTTCTTGAGGCCATCCCGCATGCTGTTGCTATGATTAGGGGTGCTAATAAGAAGAGCCCAAGAGAAGCTGTTGAATTTATTTTGCAACTCTTGAAGTATAATGACAACAATGGGAACTCTTACTCTGATGTATACTGGCTCGAAGCATTAGTCCAATCAATTGGCGAACTTGAGTTTGGGCAACAGAGTATTATATTTTTGGCATCACTTCTGAAGCGCATTGATAGGATTTTGCAATTTGAGAGGCTGATGCCTAGCTACAATGGGATCTTGACAATTAGTTGTATTCAAACCTTGACGCAGATTGCACTGAAGCTGTCCGGATTTCTTCCTCTTGATCGCGTGTTCGAACTAATAAGTCCTTATCGGAAATCCAATGCACTATGGCAAGTACGAATAGAAGCAAGCAAAGCTCTCCTTGAACTTGAATTCCACTCCAAAGGCATTGATGGAGCAATATTGTTGTTTGGAAAATATTTGGAAGAGGAGACATCGCCTAGAGGGCAGGTGAAACTGGCCGTATATGCCATGCAGATATGTCAGATGAGTCATGTACCAGATTCCAGCAATTTCATTCACAGTGAAACTCTTGTGGCTTTGCTTCAACTGCTTGAAAGCAATATAGCATTCAACAATGTCTATCTACGACATTACTTGTTTTGCATTTTACAAATTCTTGCAGGGAGGCCTCCGACACTCTATGGAGTACCCAGACATCATAGACCATTACAAGCGGGTGACACAGAAACTGGCAGTGAACAGAAGAAAATTTTTACAGCTCTTGTTTCTGAGACTAATCAACTTGAGATATCTGCTTTAGTTCCTAATCCACTGGAACCGCTTGAATTCTCAAGCATCCCGCCTGATGGTTTGGAAGGTCTGAAAGAAATGCTGGCTTTACCAGCAGGTCTGAAAGAAGTGCTCCCCTTACCAGAAGCGTCTGTAGAAGCACCCGATGTTCCAGAAGCTTCCAAGGAAGCCACAGTTTCTGTCAGCCAAGGACGACGAAAACCAATTTTTAAGATAAAAGTAAGATCATCTACTTACGCCAGTGGAGCACAGGAGACTAACACTCGGGGCGGTAATCAAGAAATTGAACTTGGACAGAGCAGTTCTGTTTCAGTAGATGCACCCCAAAGAAATTTTACAGAGACAGTAAGTGTTAGCAATCAGAATCTCGAAGAAAATAACTCGTGTCATAATCATGGATCCCGTATGACAGCCAGTATTGGGAGTGCTAAGATTCCAAGTGATGGTGATGAGCTTGGGAAGGAATTTCAGTGTACAGCTGATTCTAGCAGAGCCTTGGCATTACCCAATCCTGACAATCCTTCATCTTCTAGCATCATCCATGACAGCAACATAGACTTGGGTGCACAAAAGTACGCGAGTCTACAAACTCTTTCTAGGGGAAAATATGATCTCGACGGTGGTTCTTTTGCCACAGTGGATTCTCCGCAGCGGGGGAAAAAAGAGAAGAAGAGAGACAGAGAAAAGAAGCGGAGTCGAGGAGAACATAAAGAACATTGGGATGATCCTGCATACTTGGAGCACAAACGCTTGAAGAAGGAAAAGAAGCAGAAGAAGAAAGAGTTGGCAAAACTGATGAAAAACGAGGCAAACCAATCTCTGACCCTTAAAAAGGAGGAACCCGAAATTACCTCATCCGTGGGGGTTGTCCATAATAAACAAGAGAGGCCTGTGATAAAGTTGGTAGCTGCTCCACCGGAACCAAGTCGATCTAAAGCTGTTGGAGCCGACACTAGACCAGAGCCGTCATCGCAAGGTACACCTGCTGCTCCAAAAATCCGATTAAAAATAAAAACAAGAACGATTAATTAA 4116 42.69 MAKPRKPKTSGDMKPDNSVAVVRHQKLCLSIDIDKRRIFGFTELEIAVPDIGIVGLYAENLEIESISVDGEPAEFEYYPHHQHVEKDSRWNSVSSPSSAADAAGSLYFSSLERELIPNLLINCCKAYKNGSEQQEQLVVENGEQNANEAKQNVRLVHIDYWVEKAKAGIHFNKNSVHTDNQIRRARCWFPCMDDGLQRCCYDMEFTVAHGLVAVSTGTLLYQVLGRDVPPSKTYVYRLDIPVNAQFISLAVGSFEILPDHQITCISHMCMPNNLSKLRNTVEFFNNAFSLYKDYLSADFPFESYKQVFIEPEMSVSSSSFGASMCIFSSHLLFDEKVIDKTIETWIKLASAFARQWFGIYITPESSNDEWLVDGLASFLTDMFIEKYLGNNEACYRRYKANSAVCKADSTGATALSASSSCKDLYGTHCIGMYGKIRSWKAVAILKMLEKQMGFENFRKILQTIVSRAEDTTLSSKSLSTKEFRQFANKIGNLERPFLKEFFPRWVGSCGCPVLRMSFSNNKRKIEMVVLRESTALLGANASDVAVSKDLESRSDTEWPGIMTIRVCEIEGLYDHPVLPLNGESSQFLEIPCYAKPGAKRPQKTKKGTKPDGSDDNGDMPAHSSLDVRLSMETPVLWLRADPGMEYLSEIHFHQPVQMWINQLEKDKDVVAQAQAIATMQTLPHLPFAVVNGLNNFLIDSKAFWRVRIDAAFALAETASEDSETAGLHNLIKYYKSRRFDANTGLPKPNDFRNFAEYFVLEAIPHAVAMIRGANKKSPREAVEFILQLLKYNDNNGNSYSDVYWLEALVQSIGELEFGQQSIIFLASLLKRIDRILQFERLMPSYNGILTISCIQTLTQIALKLSGFLPLDRVFELISPYRKSNALWQVRIEASKALLELEFHSKGIDGAILLFGKYLEEETSPRGQVKLAVYAMQICQMSHVPDSSNFIHSETLVALLQLLESNIAFNNVYLRHYLFCILQILAGRPPTLYGVPRHHRPLQAGDTETGSEQKKIFTALVSETNQLEISALVPNPLEPLEFSSIPPDGLEGLKEMLALPAGLKEVLPLPEASVEAPDVPEASKEATVSVSQGRRKPIFKIKVRSSTYASGAQETNTRGGNQEIELGQSSSVSVDAPQRNFTETVSVSNQNLEENNSCHNHGSRMTASIGSAKIPSDGDELGKEFQCTADSSRALALPNPDNPSSSSIIHDSNIDLGAQKYASLQTLSRGKYDLDGGSFATVDSPQRGKKEKKRDREKKRSRGEHKEHWDDPAYLEHKRLKKEKKQKKKELAKLMKNEANQSLTLKKEEPEITSSVGVVHNKQERPVIKLVAAPPEPSRSKAVGADTRPEPSSQGTPAAPKIRLKIKTRTIN 1371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 16551448 16573408 - Bpe001481.1 Bpe15g00546 116225

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00546 1371 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 18 1297 IPR037813 GO:0005669
Bpe15g00546 1371 MobiDBLite consensus disorder prediction 1329 1371 - -
Bpe15g00546 1371 SUPERFAMILY ARM repeat 442 987 IPR016024 -
Bpe15g00546 1371 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 17 252 IPR042097 -
Bpe15g00546 1371 Gene3D Neutral Protease Domain 2 259 510 IPR027268 -
Bpe15g00546 1371 MobiDBLite consensus disorder prediction 596 624 - -
Bpe15g00546 1371 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 266 515 - -
Bpe15g00546 1371 Coils Coil 1276 1300 - -
Bpe15g00546 1371 MobiDBLite consensus disorder prediction 1232 1290 - -
Bpe15g00546 1371 Pfam Peptidase family M1 domain 282 480 IPR014782 GO:0008237|GO:0008270
Bpe15g00546 1371 Gene3D tricorn interacting facor f3 domain 20 252 IPR042097 -
Bpe15g00546 1371 MobiDBLite consensus disorder prediction 1244 1278 - -
Bpe15g00546 1371 CDD M1_like_TAF2 24 506 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00546 K03128 TAF2; transcription initiation factor TFIID subunit 2 - csv:101210662 1696.79
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g367 . . . . . . . . Cmo13g01082 . . . . . . Cpe20g00107 . . . . . . . . . . . . . . . Cone2ag0646 . . . Lsi02g00164 Csa01g00648 Chy12g01454 Cme12g01894 . . . Bda14g00912 . Bpe15g00546 Bma03g00887 . . . . Cma13g01041 . Car13g00873 . . . Bhi08g01209 . . Lac10g0216 . . . Cla04g01110 Cam04g1162 Cec01g1673 Cco01g1719 Clacu04g1190 Cmu04g1170 Cre01g1467 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010321 1 2 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe15g00546 Bpe_Chr15 FPKM 18.080809 16.81563 27.245508 35.545734 17.219212 12.042594 20.763958 16.033442 20.842667 25.444174