Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe15g00553 | ATGGAACCGGTTGACATAGTAGGTAAATCCAAGGAGGACGCTTCGCTTCCAAAAGCAACAATGACCAAAATTATCAAGGAAATGCTCCCACCTGATGTGCGTGTTGCAAGGGATGCTCAAGATCTTCTGATCGAGTGTTGTGTAGAGTTCATAAATCTTGTATCATCAGAGTCAAATGAAGTTTGTAACAGAGAAGAGAGACGAACCATCGCGCCTGAGCATGTGCTCAAGGCTTTGGAGGTGCTTGGGTTTGGTGATTATATTGAAGAAGTTTTTGCAGCTTATGAACAACACAAGCTTGAAACCGTGCAAGACTCATTGAAAAGTGGGAAGTGGAGCAATGGAGCCAAAATGTCAGAGGAAGAAGCATTGGCCGAGCAGCAAAGAATGTTTGCTGAGGCACGCGCAAGAATGAATGGCCATGTCGCTTCTGAAAAGCAACCTGAGTCGAACCAAAGTTTAGAGAGCTAA | 471 | 44.59 | MEPVDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCNREERRTIAPEHVLKALEVLGFGDYIEEVFAAYEQHKLETVQDSLKSGKWSNGAKMSEEEALAEQQRMFAEARARMNGHVASEKQPESNQSLES | 156 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 16595219 | 16597886 | - | Bpe001488.1 | Bpe15g00553 | 116232 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe15g00553 | 156 | MobiDBLite | consensus disorder prediction | 137 | 156 | - | - | |
Bpe15g00553 | 156 | Pfam | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 14 | 79 | IPR003958 | - | |
Bpe15g00553 | 156 | SUPERFAMILY | Histone-fold | 12 | 142 | IPR009072 | GO:0046982 | |
Bpe15g00553 | 156 | MobiDBLite | consensus disorder prediction | 106 | 126 | - | - | |
Bpe15g00553 | 156 | Gene3D | Histone, subunit A | 5 | 147 | IPR009072 | GO:0046982 | |
Bpe15g00553 | 156 | Coils | Coil | 117 | 137 | - | - | |
Bpe15g00553 | 156 | PANTHER | PROTEIN DR1 HOMOLOG | 1 | 155 | IPR044255 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe12g00503 | Bpe15g00553 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe15g00553 | Bpe-Chr15:16595219 | Bpe04g01866 | Bpe-Chr4:23814893 | 1.07E-18 | dispersed | |
Bpe12g00503 | Bpe-Chr12:10867718 | Bpe15g00553 | Bpe-Chr15:16595219 | 4.97E-100 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22587 | PF00808 | CBFD_NFYB_HMF | 1.60E-22 | CL0012 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe15g00553 | K21751 | - | jre:109017784 | 277.33 |