Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00553 ATGGAACCGGTTGACATAGTAGGTAAATCCAAGGAGGACGCTTCGCTTCCAAAAGCAACAATGACCAAAATTATCAAGGAAATGCTCCCACCTGATGTGCGTGTTGCAAGGGATGCTCAAGATCTTCTGATCGAGTGTTGTGTAGAGTTCATAAATCTTGTATCATCAGAGTCAAATGAAGTTTGTAACAGAGAAGAGAGACGAACCATCGCGCCTGAGCATGTGCTCAAGGCTTTGGAGGTGCTTGGGTTTGGTGATTATATTGAAGAAGTTTTTGCAGCTTATGAACAACACAAGCTTGAAACCGTGCAAGACTCATTGAAAAGTGGGAAGTGGAGCAATGGAGCCAAAATGTCAGAGGAAGAAGCATTGGCCGAGCAGCAAAGAATGTTTGCTGAGGCACGCGCAAGAATGAATGGCCATGTCGCTTCTGAAAAGCAACCTGAGTCGAACCAAAGTTTAGAGAGCTAA 471 44.59 MEPVDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCNREERRTIAPEHVLKALEVLGFGDYIEEVFAAYEQHKLETVQDSLKSGKWSNGAKMSEEEALAEQQRMFAEARARMNGHVASEKQPESNQSLES 156
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 16595219 16597886 - Bpe001488.1 Bpe15g00553 116232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00553 156 MobiDBLite consensus disorder prediction 137 156 - -
Bpe15g00553 156 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 14 79 IPR003958 -
Bpe15g00553 156 SUPERFAMILY Histone-fold 12 142 IPR009072 GO:0046982
Bpe15g00553 156 MobiDBLite consensus disorder prediction 106 126 - -
Bpe15g00553 156 Gene3D Histone, subunit A 5 147 IPR009072 GO:0046982
Bpe15g00553 156 Coils Coil 117 137 - -
Bpe15g00553 156 PANTHER PROTEIN DR1 HOMOLOG 1 155 IPR044255 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe12g00503 Bpe15g00553 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe15g00553 Bpe-Chr15:16595219 Bpe04g01866 Bpe-Chr4:23814893 1.07E-18 dispersed
Bpe12g00503 Bpe-Chr12:10867718 Bpe15g00553 Bpe-Chr15:16595219 4.97E-100 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22587 PF00808 CBFD_NFYB_HMF 1.60E-22 CL0012 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00553 K21751 - jre:109017784 277.33