Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00556 TCCCCAATGGCTTTAGCATCTCGAACCGCCGCCAACCTCATTAACCAGTCCTCATTTCCCCTTCAATCTCTACAAAAGCCGCAAACTTTTACCGCTTCTGTTCCTGTTTCGTCTCGCTCCCTAGCCGTCCGGTGTTCCGTTGCGGCTTCGCCGTCGGCGGCGGCGGCAACGAAGGGTTTGAATGAGTATAAGCTGAAGTCGTTGAAGGCGAGGCAGATAATTGATAGCAGAGGGAATCCGACGATCGAGGTTGATCTGTTCACTGATGATCTTCACCGATCTGCTGTTCCTAGTGGGGCTTCCACTGGGATCTACGAAGCGTTGGAGCTAAGAGATGGAGATAAGAGCGTTTATGGAGGCAAGGGAGTTCTTAATGCTGTAAGGAATATCAATGAAATCTTGGGTCCTAAGCTCGTTGGGATCGATGTGAGAAACCAAGCTGATGTTGATGCCATCATGCTGGAAATCGACGGAACACCAAACAAGTCAAAACTGGGGGCCAACGCAATATTAGGAGTATCTTTAAGCGTATGCAGGGCAGGTGCAGGAGCAAAGGACGTGCCGTTGTACAAGCACATCCAGGAATTGTCTGGAACGAAAGAGCTTGTCATGCCAGTTCCTGCTTTTAATGTGATCAATGGAGGCAGTCATGCTGGAAATAATTTGGCTATGCAGGAATTCATGATATTACCAGTGGGTGCATCCTCCTTTTCCGAGGCCCTTCGCATGGGAAGTGAAGTTTATCATATACTGAAGGGAATAATAAAGAAAAAATATGGGCAAGATGCTTGCAATGTTGGAGATGAAGGAGGATTTGCTCCAAATGTTCAAGATAATAGAGAGGGACTGGTTCTTCTCATAGATGCCATTGAAAAGGCTGGTTACACTGGCAAGATCAAAATAGGAATGGACGTTGCAGCTTCGGAGTTCTTCACGAAAGAAGGAAGCTATGATTTGAACTTTAAGAAACAACCAAATGATGGAGCCCACGTTCTGTCTGCAAATAGCCTTTGTGATCTTTACAAGCAGTTTGTGAGAGACTTCCCCATTGTCTCCATTGAAGATCCCTTTGATCAAGATGACTGGAGCTCATGGGCTTCCCTACAGTCTTCAGTCGATATCCAGCTCGTAGGAGACGACTTGTTGGTGACCAACCCAAAGCGAATCGCAGACGCCATTAAGAAAAAGGCTTGCAATGGTTTGCTTCTTAAGGCAAGCCAAACCAAAACTAGGAAGAATTGTTTAAATATTGTTAACCAAATCGGAACTGTCACTGAATCCATTCAAGCTGCACTCGACTCGAAAGCTGCTGGCTGGGGTGTGATGGTCAGCCACCGGAGTGGGGAAACTGAGGACAACTTTATCGCCGACCTTTCCGTTGGCTTAGCTAGTGGACAGATCAAAACGGGGGCTCCTTGCCGAAGTGAACGGTTAGCAAAATACAATCAGCTTCTCCGGATTGAAGAGGAACTCGGAAACGTGCGTTATGCGGGTGAGGCATTTAGATCGCCTTGA 1515 47.06 SPMALASRTAANLINQSSFPLQSLQKPQTFTASVPVSSRSLAVRCSVAASPSAAAATKGLNEYKLKSLKARQIIDSRGNPTIEVDLFTDDLHRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVRNINEILGPKLVGIDVRNQADVDAIMLEIDGTPNKSKLGANAILGVSLSVCRAGAGAKDVPLYKHIQELSGTKELVMPVPAFNVINGGSHAGNNLAMQEFMILPVGASSFSEALRMGSEVYHILKGIIKKKYGQDACNVGDEGGFAPNVQDNREGLVLLIDAIEKAGYTGKIKIGMDVAASEFFTKEGSYDLNFKKQPNDGAHVLSANSLCDLYKQFVRDFPIVSIEDPFDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIADAIKKKACNGLLLKASQTKTRKNCLNIVNQIGTVTESIQAALDSKAAGWGVMVSHRSGETEDNFIADLSVGLASGQIKTGAPCRSERLAKYNQLLRIEEELGNVRYAGEAFRSP 504
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 16611293 16614304 + Bpe001491.1 Bpe15g00556 116235

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00556 504 SFLD enolase 66 491 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Bpe15g00556 504 SMART Enolase_N_3 65 193 IPR020811 -
Bpe15g00556 504 SUPERFAMILY Enolase C-terminal domain-like 201 494 IPR036849 -
Bpe15g00556 504 CDD enolase 67 490 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Bpe15g00556 504 PANTHER ENOLASE 1, CHLOROPLASTIC 31 504 - -
Bpe15g00556 504 Gene3D - 59 186 IPR029017 -
Bpe15g00556 504 SUPERFAMILY Enolase N-terminal domain-like 65 196 IPR029017 -
Bpe15g00556 504 Pfam Enolase, C-terminal TIM barrel domain 202 502 IPR020810 -
Bpe15g00556 504 PANTHER ENOLASE 31 504 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Bpe15g00556 504 SMART Enolase_C_3 201 504 IPR020810 -
Bpe15g00556 504 PRINTS Enolase signature 166 182 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Bpe15g00556 504 PRINTS Enolase signature 96 110 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Bpe15g00556 504 PRINTS Enolase signature 414 428 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Bpe15g00556 504 PRINTS Enolase signature 443 460 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Bpe15g00556 504 PRINTS Enolase signature 223 236 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Bpe15g00556 504 SFLD Enolase 66 491 - -
Bpe15g00556 504 Gene3D - 187 504 IPR036849 -
Bpe15g00556 504 TIGRFAM eno: phosphopyruvate hydratase 66 500 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Bpe15g00556 504 Pfam Enolase, N-terminal domain 66 193 IPR020811 -
Bpe15g00556 504 Hamap Enolase [eno]. 63 491 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00556 K01689 ENO, eno; enolase [EC:4.2.1.11] - zju:107419014 823.928
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01549 Bpe-Chr4:21854952 Bpe15g00556 Bpe-Chr15:16611293 0 dispersed
Bpe11g00739 Bpe-Chr11:5611849 Bpe15g00556 Bpe-Chr15:16611293 7.25E-155 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g393 . . . . . . . . . . . . . Car11g00221 Sed12g2041 . Cpe04g01430 Bhi02g00032 Tan09g1975 Cmetu02g0279 . Hepe09g0308 . . Cla06g01505 Cam06g1660 Cec06g1722 Cco06g1717 Clacu06g1626 Cmu06g1575 Cre06g2385 . . Cone13ag0013 Cone19ag0011 . . . . . . . Bda14g00902 . Bpe15g00556 Bma03g00876 . . . Cmo11g00246 . . . . . . . . . . . . . . . . . . . . Lsi06g01369 Csa01g00309 Chy02g02429 Cme02g01786
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011033 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe15g00556 Bpe_Chr15 FPKM 10.326404 10.822014 18.053789 17.716169 9.437471 9.51156 10.062233 20.654053 19.140533 20.18972