Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00590 ATGGTTTCCGAGAAAATTCATGAGAAAACCGTTTGTGTGATCGGAGCCGGACCGTCCGGGCTAGTGGCGGCAAGAGAGCTGAGAAAAGAAGGTCACGAGGTAGTTGTTTTAGAACAAAACCATGAAGTGGGAGGACAATGGCTGTACAACCCAATTGTGGAGATTGAGGATCCCTTAGGAAGAGACGCTTTTCTAAAGGTTCATAGCAGTATTTACTCATCGTTAAGGCTCACATCTCCGAGAGAAATCATGGGTTTTACAGATTTTCCATTCTTGGTGAAGAAAGATAGGGATATGAGAAGGTTTCCTAACCACAAGGAACTTCTGTTGTATCTTGTAGATTTCTGTGACTGGTTTGGATTGAGAGAGATGATAAGGTTTAATTGTAGAGTAGAATATGTTGGGATTTTGGATTTTTCTGCTGTTGGAAAGGATTTGAAATGGGTTGTGAGAAGTAAAGTAAAAGGGAATGAAAACGAGGTAGTGGAAGAAGTTTTCGATGCTGTTGTTGTGGCTACTGGCCATTATTCTCATCCTAGATTACCTCCCATTGAAGGAATTAATACATGGAGAAGGAAGCAAATGCATAGTCATATTTACAGAGTTCCTGAGCCATTTCACCATGAGGTTGTGGTGGTGGTTGGAAACTCTCTTAGTGGGCAAGACATATCCTTGGAGCTTGTGAGTGTGGCTAAGGAAGTTCACATCAGTGCTAAATCTCTTAATATTTCTCCAGGATTGTCTAAACTCATTGCCAAACATCACGATTTACATCTCCATCCCCAGATTGAATCACTGAAAGAAGATGGTCGTGTTGAATTTGTGGATGGGTCTTGGATTGTTGCAGATACTGTCATATACTGTACTGGGTATTCATATAAGTTTCCATTTCTTGACACCAAAGGAATAGTTGATGTAGATGATGATAGAGTGGGGCCTTTGTATGAGCATACTTTCCCTCCTTCCCTTGCTCCCTCTCTCTCCTTTATAGGCATTCCCAGAAAGGTGATAGGGTTCCCCTTTTTTGAGGCACAAGCCAAATGGATAGCTGAGTTGCTGTCTGAGAAAAGAGCATTACCATCATGGGAGAAGATGATGTCCTCCATTCATGACTTTTACCTCTCTAGGGATCTTGCTTCCATCCCCAACCATAATACCCATGATATTGCTAATTTTGAGTATTGTGATAAATATGGAGATAATGTTGGATTCCCACACTTGGAAGAATGGAGGAAACAGCTGTGCTTATCAGCCTTGATGAATGCTGATTCAAATCTGGACACATACAGAGATTCTTGGAATGATGATGAACTGCTTCAACAGGCCTATCAGAGTCCCCATTTCACTCAATATCACTCTTCAATTTAA 1368 41.3 MVSEKIHEKTVCVIGAGPSGLVAARELRKEGHEVVVLEQNHEVGGQWLYNPIVEIEDPLGRDAFLKVHSSIYSSLRLTSPREIMGFTDFPFLVKKDRDMRRFPNHKELLLYLVDFCDWFGLREMIRFNCRVEYVGILDFSAVGKDLKWVVRSKVKGNENEVVEEVFDAVVVATGHYSHPRLPPIEGINTWRRKQMHSHIYRVPEPFHHEVVVVVGNSLSGQDISLELVSVAKEVHISAKSLNISPGLSKLIAKHHDLHLHPQIESLKEDGRVEFVDGSWIVADTVIYCTGYSYKFPFLDTKGIVDVDDDRVGPLYEHTFPPSLAPSLSFIGIPRKVIGFPFFEAQAKWIAELLSEKRALPSWEKMMSSIHDFYLSRDLASIPNHNTHDIANFEYCDKYGDNVGFPHLEEWRKQLCLSALMNADSNLDTYRDSWNDDELLQQAYQSPHFTQYHSSI 455
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 16832926 16836177 + Bpe001524.1 Bpe15g00590 116269

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00590 455 PIRSF FMO 7 243 IPR000960 GO:0050660|GO:0050661
Bpe15g00590 455 PIRSF FMO 247 403 IPR000960 GO:0050660|GO:0050661
Bpe15g00590 455 PANTHER FLAVIN-CONTAINING MONOOXYGENASE FMO GS-OX-LIKE 8 6 452 - -
Bpe15g00590 455 PANTHER DIMETHYLANILINE MONOOXYGENASE 6 452 - -
Bpe15g00590 455 SUPERFAMILY FAD/NAD(P)-binding domain 254 416 IPR036188 -
Bpe15g00590 455 Gene3D - 11 432 IPR036188 -
Bpe15g00590 455 PRINTS Flavin-containing monooxygenase (FMO) signature 340 353 IPR000960 GO:0050660|GO:0050661
Bpe15g00590 455 PRINTS Flavin-containing monooxygenase (FMO) signature 222 237 IPR000960 GO:0050660|GO:0050661
Bpe15g00590 455 PRINTS Flavin-containing monooxygenase (FMO) signature 275 302 IPR000960 GO:0050660|GO:0050661
Bpe15g00590 455 PRINTS Flavin-containing monooxygenase (FMO) signature 33 57 IPR000960 GO:0050660|GO:0050661
Bpe15g00590 455 PRINTS Flavin-containing monooxygenase (FMO) signature 9 25 IPR000960 GO:0050660|GO:0050661
Bpe15g00590 455 Pfam Flavin-binding monooxygenase-like 9 240 IPR020946 GO:0004499|GO:0050660|GO:0050661
Bpe15g00590 455 Pfam Flavin-binding monooxygenase-like 258 371 IPR020946 GO:0004499|GO:0050660|GO:0050661
Bpe15g00590 455 Gene3D - 183 288 IPR036188 -
Bpe15g00590 455 SUPERFAMILY FAD/NAD(P)-binding domain 9 236 IPR036188 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00590 - - - qsu:112033462 728.783
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00163 Bpe-Chr7:1115311 Bpe15g00590 Bpe-Chr15:16832926 4.52E-138 dispersed
Bpe15g00590 Bpe-Chr15:16832926 Bpe06g00365 Bpe-Chr6:15148681 1.60E-14 dispersed
Bpe15g00590 Bpe-Chr15:16832926 Bpe01g00529 Bpe-Chr1:3419989 1.26E-14 transposed
Bpe15g00590 Bpe-Chr15:16832926 Bpe08g00471 Bpe-Chr8:3059566 1.50E-14 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g608 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Csa01g00575 . . . . . Bda14g00882 . Bpe15g00590 . . . . . . . . . . . Bhi08g01128 . . Lac10g0125 Hepe07g2484 . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009615 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3 1 1 1 1 1 1 1 1 1 1 1 1 33
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe15g00590 Bpe_Chr15 FPKM 2.756141 2.676601 4.101645 3.433472 7.435378 9.223368 6.949486 6.90232 7.02921 8.122122