Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00605 ATGGAAGGAGATCAAGAGCTCCGTCTGCAACACAGCATTCGCCGTCCTACCTTTCCGTTCCAACTTCTCAAAAACAGAGAAGACGAATCCTTTTGCTCTACGTGCCCTTACCCTGATTCTCTACCCATTTCTGCCGATCTTACCTCCTCCGCCGGCCCCTCCATCTCACGTTTTCCGACCACCTGTGCCGAAGAACTCACGAAGAAGCCTCCGATCAAAAAGGTACCCTCCAAAGACCGTCATACCAAGGTCGACGGCCGTGGGCGGAGAATCAGAATGCCCGCTCTCTGTGCAGCTAGGGTTTTTCAGCTCACCCGAGAGCTGGGCCATAAGTCCGACGGTGAAACCATTGAGTGGCTTCTCCAACAAGCGGAGCCATCAGTAATAGCTGCCACGGGAACTGGAACAATTCCAGCAAACTACTCTTCGTTGAACATATCGTTGAGAAGTTCCCGTTCAACCCTTTCGGTACCATCACAGCTCCGATCATCTTCTCATTACAATCCAAACTTCTTGATTCAGCACCAGAGGAAACCTCTCTTTTCCGGGTTTTCGCCGGAGACTATGTCTACCCTTCTGACTTTTCAGTCTGGAAATACAGATGCTTTACTTCAAGCAAAGCAGGAACTGCAAGAAACTCCGTTGGAACAACTGGAGGCCGGAAAAAGTGAAGGGGGAAAACCAAGGCCCGCGGAGAAGGACTTTATGCTGCAGCCATGCACCGGCAACGGCGCTATTCCACCAAGCCAAAATGCTCAAATTCCTGCAAATTTTTGGGTGACTGCAAATAGGAATAATAACCAATTAATGCCAGGCGTTGACAGCACATGGACGACATTTCCTTCTGTAAACAACAACAGGTTTCAGTTCATGAACTTTCCGCCGCCATTTACCCTATTTCCAGGTCAACAATGTGAAGAAGGAAACACCAGCAGCGGCGGAGGTCCAAATTCTTTCAAATTTCCTACCGGAACTGATTTGTCTACGCCACAAATAAGCAGGTCGTGTAGTCACCAATAG 1020 49.12 MEGDQELRLQHSIRRPTFPFQLLKNREDESFCSTCPYPDSLPISADLTSSAGPSISRFPTTCAEELTKKPPIKKVPSKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANYSSLNISLRSSRSTLSVPSQLRSSSHYNPNFLIQHQRKPLFSGFSPETMSTLLTFQSGNTDALLQAKQELQETPLEQLEAGKSEGGKPRPAEKDFMLQPCTGNGAIPPSQNAQIPANFWVTANRNNNQLMPGVDSTWTTFPSVNNNRFQFMNFPPPFTLFPGQQCEEGNTSSGGGPNSFKFPTGTDLSTPQISRSCSHQ 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 16963063 16964082 + Bpe001539.1 Bpe15g00605 116284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00605 339 ProSiteProfiles TCP domain profile. 77 131 IPR017887 -
Bpe15g00605 339 MobiDBLite consensus disorder prediction 303 339 - -
Bpe15g00605 339 Pfam TCP family transcription factor 77 193 IPR017887 -
Bpe15g00605 339 PANTHER TRANSCRIPTION FACTOR TCP23 58 317 - -
Bpe15g00605 339 MobiDBLite consensus disorder prediction 214 233 - -
Bpe15g00605 339 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 58 317 IPR005333 GO:0003700
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe12g00551 Bpe15g00605 CCT
Bpe12g00551 Bpe15g00605 ECH
Bpe07g00785 Bpe15g00605 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe12g00011 Bpe-Chr12:139554 Bpe15g00605 Bpe-Chr15:16963063 8.60E-40 dispersed
Bpe13g01416 Bpe-Chr13:19402438 Bpe15g00605 Bpe-Chr15:16963063 2.99E-69 dispersed
Bpe14g01350 Bpe-Chr14:10779890 Bpe15g00605 Bpe-Chr15:16963063 7.63E-37 dispersed
Bpe12g00551 Bpe-Chr12:11348752 Bpe15g00605 Bpe-Chr15:16963063 1.21E-110 wgd
Bpe15g00605 Bpe-Chr15:16963063 Bpe07g00785 Bpe-Chr7:14287029 1.20E-103 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22596 PF03634 TCP 3.30E-36 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00605 - - csv:101221049 297.745