Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00616 ATGATATGGCATCCAGACAAGAATCCAGTTAACAAGGGAGAAGCAGAAGCGAAATTCAAGCAAATTTCTGAAGCTTACGATGTTCTTAGCGATCCTCAGAAGCGCCAGATCTACGATCTTTACGGCGAAGAAGCCCTGAAGTCCGGGCAATTCCCTTCGCCTTCTCAGCCGCAACCGTCGATGTCCTCGATGCGCGGCCATAGCCAGCACTACCACCGCCAGCAACCCAACACGACCTCGTTTCGTTTTAATCCGAGGGATGCGGATGACATATACGCGGAGTTTTTCGGGCAGGAGAGCGGCGCCGGGAGTGGTGGTGGCGTTGGAGGGAGAAATAAGGGGTTTTTTAGGACTCCGAATGGGGCAGAGTATGGAGTTGGTTCTCAGACGAAGAAGGCCGCGGCAATTGAGAATGTGTTGCCGTGTAGTTTGGAAGAGCTCTTCAAAGGAGCAAAGAAGAAGATGAGGATTTCGAGGAATGTTTATGATGCTTCTGGTAAATTTCGAACTTTAGAAGAGATATTGACGATTGAGATAAAGCCGGGCTGGAAAAAGGGAACGAAGATCACTTTTCCAGAGAAGGGAAACCAAGAGCCAGGTGTCATTCCAGCAGATCTTGTTTTTGTGATCGATGAGAAACCACATTCTGTTTTCACGAGGGATGGTAATGATCTGGTGATGAATCAAGAACTAACGTTACTTGAGGCGCTCACAGGTAAGACCCTCGATCTCACCACCCTTGATGGAAGAAGTCTTATGATTCCTCTAACAGATATAATAAAACATGGGACAGAGGTGGTTGTCCCTAATGAAGGGATGCCGAACTCAAAAGAACCGACGAGGAAGGGGAATTTGAGGATAAATTTTGATGTTAGATACCCGTTGATACTTTCTTCAGAACAGAAGTCTGATCTGAAAAGAGTTTTGGGTGGAGTGTCATATTGA 945 46.77 MIWHPDKNPVNKGEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEALKSGQFPSPSQPQPSMSSMRGHSQHYHRQQPNTTSFRFNPRDADDIYAEFFGQESGAGSGGGVGGRNKGFFRTPNGAEYGVGSQTKKAAAIENVLPCSLEELFKGAKKKMRISRNVYDASGKFRTLEEILTIEIKPGWKKGTKITFPEKGNQEPGVIPADLVFVIDEKPHSVFTRDGNDLVMNQELTLLEALTGKTLDLTTLDGRSLMIPLTDIIKHGTEVVVPNEGMPNSKEPTRKGNLRINFDVRYPLILSSEQKSDLKRVLGGVSY 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 17040889 17042262 - Bpe001549.1 Bpe15g00616 116295

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00616 314 Gene3D - 215 294 - -
Bpe15g00616 314 Pfam DnaJ C terminal domain 138 294 IPR002939 -
Bpe15g00616 314 ProSiteProfiles dnaJ domain profile. 1 42 IPR001623 -
Bpe15g00616 314 Pfam DnaJ domain 2 39 IPR001623 -
Bpe15g00616 314 SUPERFAMILY Chaperone J-domain 2 63 IPR036869 -
Bpe15g00616 314 CDD DnaJ 3 31 IPR001623 -
Bpe15g00616 314 CDD DnaJ_C 136 294 - -
Bpe15g00616 314 Gene3D - 134 213 - -
Bpe15g00616 314 Gene3D DnaJ domain 1 107 IPR036869 -
Bpe15g00616 314 PANTHER BNAA06G20720D PROTEIN 1 312 - -
Bpe15g00616 314 ProSitePatterns Nt-dnaJ domain signature. 19 38 IPR018253 -
Bpe15g00616 314 SUPERFAMILY HSP40/DnaJ peptide-binding domain 217 303 IPR008971 GO:0006457|GO:0051082
Bpe15g00616 314 MobiDBLite consensus disorder prediction 49 84 - -
Bpe15g00616 314 SUPERFAMILY HSP40/DnaJ peptide-binding domain 139 215 IPR008971 GO:0006457|GO:0051082
Bpe15g00616 314 MobiDBLite consensus disorder prediction 47 84 - -
Bpe15g00616 314 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 312 - -
Bpe15g00616 314 PRINTS DnaJ domain signature 14 34 IPR001623 -
Bpe15g00616 314 PRINTS DnaJ domain signature 34 53 IPR001623 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00616 K09510 DNAJB4; DnaJ homolog subfamily B member 4 - qsu:112017642 437.187
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe13g00271 Bpe15g00616 CCT
Bpe13g00271 Bpe15g00616 ECH
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe14g00720 Bpe-Chr14:5599034 Bpe15g00616 Bpe-Chr15:17040889 2.70E-116 dispersed
Bpe15g00616 Bpe-Chr15:17040889 Bpe03g00479 Bpe-Chr3:24456637 1.00E-24 dispersed
Bpe15g00084 Bpe-Chr15:8724656 Bpe15g00616 Bpe-Chr15:17040889 1.38E-47 transposed
Bpe13g00271 Bpe-Chr13:10640722 Bpe15g00616 Bpe-Chr15:17040889 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g489 Blo04g00756 Blo16g00200 . . . Bpe13g00271 Bma06g00188 . Cmo13g00951 Cmo18g00102 . . . . . Cpe20g00207 . . . . . . . . . . . . . . . Cone2ag0864 Cone16ag0143 . . . Csa01g00799 Chy12g01317 Cme12g01743 . . Bda11g01684 Bda14g00836 . Bpe15g00616 Bma03g00809 . Sed08g2567 . . . Cma18g00131 Car13g00762 Car18g00123 Cpe09g01061 . Bhi08g01425 Tan05g2072 Cmetu12g0983 Lac10g0382 Hepe07g2276 . . Cla01g01417 Cam01g1483 Cec01g1522 Cco01g1569 Clacu01g1507 Cmu01g1399 Cre01g1319 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006344 2 2 2 2 2 1 2 1 1 1 1 1 0 1 1 2 1 2 2 1 1 1 1 1 1 0 1 3 1 0 38
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe15g00616 Bpe_Chr15 FPKM 0.364005 0.943847 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0