Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00638 ATGGCTGGACCTAAAGAAGACCATAAAATTGACGGGATAGGGAGAGAGGAGCAAAGTGAGTTGAGAAACCAGTATATCGACAAAGAGGGCGGTCTATCTCTTGACAGAGACATGCCTCTGCATGCCGGAAACTCCATTCACCGGTCCAGTTCTCGGCCACTGCTAGACCTTAGTAAAGCTGAAATTCAGGGTAATTTCGAAGAGAGAGACCCTACAATTCTCCTGCCTAATCAGTCGGATGATCTATCTCACCTGGCTCTAGACATTGGAGGATCTCTTATCAAGTTGGTGTATTTTTCAAGACGTGAGGACCAATCAGTCAAAGATAAGAGGAAAAAAATCTTGAAAGATAGATTGGATGTCTCAAACGGTAATAGAAGAAACTATCCAATTCTTGGCGGGAGGCTTCATTTTGTGAAGTTCGAAACTAGCAAGATCAATGAGTGCTTAGACTTCATTTGTTCCAAGCAGCTCCACCGTGGTGTATTGTGGTATCGACTTGGCTGTTGTGAAAAGGCTACAGGTGGTGGGGCATATAAGTTTGCAGATCTTTTTAAAGAAAAACTCGGGGTAAGTCTTGACAAAGAAGATGAAATGGATTGCCTCGTGGCGGGAGCAAACTTTTTGCTTAAGGCAATTCGTCATGAAGCTTTCACTCATATGGAGGGTAAGAAAGAATTTGTGCAACTAGACTATAACGAGATGTTTCCTTATCTTCTTGTTAATATTGGATCGGGAGTTAGTATGATCAAGGTTGATGGAGATGGAAGATTTGAGCGGGTTAGTGGGACGAATGTTGGAGGTGGAACTTACTGGGGACTGGGAAGGCTGTTAACCAAATGCAAGAATTTTGATGAGTTGCTAGAGTTAAGTCAAAGGGGAGATAATAGAACCATAGACATGCTTGTTGGGGACATTTATGGTGGGACAGACTATTCCAAGATCGGCCTTTCGGCATCAACTATTGCCTCTAGTTTTGGCAAGGCCATTTCAGAAAACAAGGAACTTGAAGACTACAGACCAGAAGACATCTCTCTATCTCTCTTACGAATGATTTCATATAATATTGGCCAGGTATCATATTTGAATGCATTAAGATTTGGGCTCAAGCGGATTTTTTTCGGAGGATTTTTTATCAGGGGTCATGCTTATACTATGGACACAATCTCTTTTGCAATTCAGTTTTGGTCAAAAGGAGAGGCACAAGCTATGTTCTTACGGCATGAAGGATTTCTGGGAGCCTTAGGTGCATTCTTGAGTTATGAAAAGCATGGTCTTGATGACTTGATGGTCCATCAGTTAGTTGAGAGATTTCCAATGGGTGCACCTTACACTGGAGGAAAGATTCATGGTCCTCCCCTTGTGGATCTAAATGAAAAGGCAAGTGATATTTCTTGGATGGAGAAGTTTATACAGAAGGGAACGGAGATTACTGCTCCTGTGCCCATGGCCCCTTCAGCAACTACTGGACTTGGAGGCTTTGAAGTCCCTTCGTCTAAAGGAAATGTCCTGCGTTCTGATGCAAGCGCGTTAAATGTTGGTGTGCTGCATCTTGTACCAACCTTGGACGTGTTTCCTTTGCTGGCAGATCCAAAAACGTATGAACCTAACACTATTGATCTCGCTGACCACAGTGAATTAGAGTATTGGTTTACTGTACTGTCAGGGCATTTACCAGACCTCGCGGTGGCAAGTGAAGGGGGAACCGATGATGCTAAGAGAAGGGGCGATGCTTTTGCACGTGCATTTTCTGCACACTTGAGAAGGTTGATGGAAGAACCTGCAGCATATGGAAAGTTAGGGTTGGCAAATTTGTTGGAGCTGAGGGAGGAGTGCTTGAGGGAGTTTCAATTTGTTGACGCCTACAGAAGCATAAAACAGAGGGAGAATGAAGCCTCACTTACTGTGTTACCTGACCTGCTGATGGAGCTTGACGGTATGAGTGAGGAAACAAGACTCCTTATGCTAATTGAAGGTGTTCTAGCTGCAAATATCTTTGACTGGGGATCCCGCGCTTGTGTGGATCTCTATCACAAAGGAACTATTATCGAAATATATAGAATGAGCCGAAATAAAATGCAAAGACCATGGCGGGTAGATGATTTTGATGTATTCAGAGAGAGAATGTTAGGGTCTGGAGATAAGAAGCCTCAACCACATAAAAGAGCTTTACTCTTTGTGGACAACTCAGGTGCTGACATTGTTCTAGGAATGCTTCCCCTTGCAAGGGAACTCCTTCGACGTGGAACTGAAGTTGTTTTGGTAGCCAACTCGCTTCCTGCTTTAAACGATGTAACTGCTTTGGAGCTTCCTGACATTGTAGCTGAGGCTGCCAAGCACTGTGACATACTCCGAAAAGCTGCAGTGGCAGGAGGATTAATTGTGGATGCAATGATTAACTCCTCGGAGGGTTCTAAAGAAAATTCATCATACGTCCCATTAATGGTCGTGGAGAATGGATGTGGAAGTCCATGCATTGACTTAAGGCAGGTCAGCTCCGACCTGGCTGCTGCTGCAAAAGACGCCGATTTGATAATCTTGGAAGGAATGGGCAGGTCTCTTCACACAAACTTCAATGCTCATTTCAAATGTGATGCATTGAAGGCAAGTTTCTGTTTTTCCATCCTAGCCAGCAAATTAATTTATCCCCAATTTCTTGCAATGGTGAAAAATCAGAGATTGGCAGAAAAGTTGATTAAAGGAAACATATATGACTGTGTTTGTCGATACGATCCTGCCGGAAACCCAGACGATTAG 2757 43.56 MAGPKEDHKIDGIGREEQSELRNQYIDKEGGLSLDRDMPLHAGNSIHRSSSRPLLDLSKAEIQGNFEERDPTILLPNQSDDLSHLALDIGGSLIKLVYFSRREDQSVKDKRKKILKDRLDVSNGNRRNYPILGGRLHFVKFETSKINECLDFICSKQLHRGVLWYRLGCCEKATGGGAYKFADLFKEKLGVSLDKEDEMDCLVAGANFLLKAIRHEAFTHMEGKKEFVQLDYNEMFPYLLVNIGSGVSMIKVDGDGRFERVSGTNVGGGTYWGLGRLLTKCKNFDELLELSQRGDNRTIDMLVGDIYGGTDYSKIGLSASTIASSFGKAISENKELEDYRPEDISLSLLRMISYNIGQVSYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAIQFWSKGEAQAMFLRHEGFLGALGAFLSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLVDLNEKASDISWMEKFIQKGTEITAPVPMAPSATTGLGGFEVPSSKGNVLRSDASALNVGVLHLVPTLDVFPLLADPKTYEPNTIDLADHSELEYWFTVLSGHLPDLAVASEGGTDDAKRRGDAFARAFSAHLRRLMEEPAAYGKLGLANLLELREECLREFQFVDAYRSIKQRENEASLTVLPDLLMELDGMSEETRLLMLIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRNKMQRPWRVDDFDVFRERMLGSGDKKPQPHKRALLFVDNSGADIVLGMLPLARELLRRGTEVVLVANSLPALNDVTALELPDIVAEAAKHCDILRKAAVAGGLIVDAMINSSEGSKENSSYVPLMVVENGCGSPCIDLRQVSSDLAAAAKDADLIILEGMGRSLHTNFNAHFKCDALKASFCFSILASKLIYPQFLAMVKNQRLAEKLIKGNIYDCVCRYDPAGNPDD 918
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 17168853 17179326 - Bpe001571.1 Bpe15g00638 116317

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00638 918 SUPERFAMILY Actin-like ATPase domain 83 216 IPR043129 -
Bpe15g00638 918 Pfam Damage-control phosphatase ARMT1-like domain 605 898 IPR002791 -
Bpe15g00638 918 Gene3D Uncharacterised protein PF01937, DUF89, domain 3 698 912 - -
Bpe15g00638 918 Gene3D - 76 229 - -
Bpe15g00638 918 PIRSF PanK_long 38 915 IPR015844 GO:0004594|GO:0015937
Bpe15g00638 918 SUPERFAMILY AF1104-like 516 912 IPR036075 -
Bpe15g00638 918 SUPERFAMILY Actin-like ATPase domain 188 421 IPR043129 -
Bpe15g00638 918 TIGRFAM panK_eukar: pantothenate kinase 84 420 IPR004567 GO:0004594|GO:0005524|GO:0015937
Bpe15g00638 918 Gene3D - 537 619 IPR035073 -
Bpe15g00638 918 Gene3D - 300 410 - -
Bpe15g00638 918 PANTHER PANTOTHENATE KINASE 33 819 IPR004567 GO:0004594|GO:0005524|GO:0015937
Bpe15g00638 918 PANTHER PANTOTHENATE KINASE 2 33 819 - -
Bpe15g00638 918 MobiDBLite consensus disorder prediction 1 22 - -
Bpe15g00638 918 Pfam Fumble 84 419 IPR004567 GO:0004594|GO:0005524|GO:0015937
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00638 K24265 PANK4; bifunctional damage-control phosphatase, subfamily II, fusion protein - rcu:8288998 1506.12
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g01785 Bpe-Chr11:14173342 Bpe15g00638 Bpe-Chr15:17168853 8.99E-175 dispersed
Bpe15g00638 Bpe-Chr15:17168853 Bpe15g00776 Bpe-Chr15:18062315 2.80E-55 dispersed
Bpe15g00638 Bpe-Chr15:17168853 Bpe12g00157 Bpe-Chr12:1145136 2.34E-56 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g757 Blo04g00734 . . . . . . . . Cmo18g00128 . . . . . . . . . . . . . . . . . . . . . . Cone16ag0101 Cone13ag0142 . Lsi02g00371 Csa01g00852 Chy12g01267 Cme12g01694 . . . Bda14g00811 . Bpe15g00638 Bma03g00781 . . . . . Cma18g00170 . Car18g00161 Cpe09g01025 . Bhi08g01609 Tan05g2008 . Lac10g0449 Hepe07g2227 . . Cla01g01300 Cam01g1429 Cec01g1464 Cco01g1460 Clacu01g1366 Cmu01g1272 Cre01g1264 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005817 1 5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 3 3 1 39
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe15g00638 Bpe_Chr15 FPKM 0.953224 0.75816 0.879605 0.727151 1.955929 1.494478 1.859505 1.46191 0.677585 1.1919