Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00651 ATGGATGGGGAAGCGATGCAGATTCAGCGTTGCAGAGGAATTATGATGTCACCAGAAATAGTGGAGATCGAAGAGAGCAAGAGTTTTGGTGGAGGGTTGAGTGGAGTGGGAAATGATGTTTACGTAACAGTCGGTAAAGATGATTTACATGTTCTGAAATGGGCTATTGATCATGCCCTCTCTCCTGGTTCTCGAGTTTATCTGGTTCATGTCTTCCCTCCGTTGACCTACATAGCCACCCCTGTGGGGAGATTATCGAAGAGCCAACTGAGCAAAGAACAGGTGAGAATCTATGTTAACGAAGAGAACAACAGAAGGAGGAACCTTCTGCAAAAATACATCAGACTATGCAATGACTCTAAGGTAGTGGTCGATACAATGCTGCTCGAGAGCAATAGTACAGCAAAAGCCATTGTCGAACTCATCCCTGTGCTTAATATCACCCATCTTGTCATTGGTACCAAACGCCCTCTTTCCTCCAGGTCAAACCTCACTCTCATAAATTTAACCATTTATAATACCAGTAAATTGTTTATTTACTATTTATATAAGTTCAGGAGGTTGAGGAAGAAGATGGGAAGAGGGGACTACGTGAAGAAGAATGCGCCAGAATACTGTGAAGTCAGCCTGGTCTGCAACGGGAAGAAGGTGGCTCAAGATAACTCACGCTTAATTCCTTCACCCCCACCGTCGTCGTCCTCGGACAACTTCTTCAAATGTGCTTGCTTCCCGGCTAGAAGGTCGACGCGTTAA 753 44.89 MDGEAMQIQRCRGIMMSPEIVEIEESKSFGGGLSGVGNDVYVTVGKDDLHVLKWAIDHALSPGSRVYLVHVFPPLTYIATPVGRLSKSQLSKEQVRIYVNEENNRRRNLLQKYIRLCNDSKVVVDTMLLESNSTAKAIVELIPVLNITHLVIGTKRPLSSRSNLTLINLTIYNTSKLFIYYLYKFRRLRKKMGRGDYVKKNAPEYCEVSLVCNGKKVAQDNSRLIPSPPPSSSSDNFFKCACFPARRSTR 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 17271565 17272534 - Bpe001584.2 Bpe15g00651 116330

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00651 250 Pfam Universal stress protein family 48 158 IPR006016 -
Bpe15g00651 250 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 184 247 - -
Bpe15g00651 250 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 184 247 - -
Bpe15g00651 250 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 9 161 - -
Bpe15g00651 250 CDD STK_N 40 214 - -
Bpe15g00651 250 Gene3D HUPs 40 168 IPR014729 -
Bpe15g00651 250 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 9 161 - -
Bpe15g00651 250 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 47 155 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00651 - - - csin:114322948 251.136
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00037 Bpe-Chr8:205764 Bpe15g00651 Bpe-Chr15:17271565 3.37E-38 dispersed
Bpe15g00651 Bpe-Chr15:17271565 Bpe08g00105 Bpe-Chr8:565952 1.44E-16 dispersed
Bpe13g00228 Bpe-Chr13:10287434 Bpe15g00651 Bpe-Chr15:17271565 1.32E-113 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g812 Blo04g00721 Blo16g00236 . . . . . . . . . . . . . . . Bhi02g00511 . . . Hepe09g0232 . . Cla06g01694 Cam06g1882 Cec06g1929 Cco06g1934 Clacu06g1838 Cmu06g1780 Cre06g2595 . . Cone13ag0165 Cone19ag0162 . . . . . . . Bda14g00799 . Bpe15g00651 Bma03g00771 . . . . . . . . . . . . . . . . . . . . . . . . . Csa01g00113 Chy02g02612 Cme02g02009
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006923 2 2 2 1 2 2 0 2 2 2 2 2 0 1 1 0 2 2 0 2 2 1 1 0 0 1 0 1 0 1 36
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe15g00651 Bpe_Chr15 FPKM 3.156522 3.540617 3.57043 2.76687 3.688288 5.231212 3.858519 0.0 1.605206 1.830894