Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00656 ATGCATGAGCACATCGGGATTCCGGCATGTTTTTCTTCCGGCGATAAACAATCCGACCATCCAGCTGTTGTGACGAGGTTGAGCCATCGAGTTGTGTCCTCAGTGTACCGGACTAAGGTCGCTGATCAATGCCGACTGATCACCATAACGTGGAGCAAGAATCTACTCCTCGATGGGCTATCTGTTTCGGTTGAAGGTCCAGAAGGAGAAACCCAGTTCACCTGCAAAATCGAGCCGAAGCCGTGGCAGTTCTGGAGAAAACAGGGTTGGAAGCGGTTTGTAGTCGATTGTAAAGCCGTCGATGTGTTTTGGGACCTCCGAACTGCGAAATTCGACGGCGAAGTGGAACCCATTTCGGAGTTTTACGTCGCAGTGGTTTCTGATGAAGAGGTCGTTCTGCTTCTCGGCGATCGGAAAAAGGACGCATATCGGAGAACTGGTTGCCGACCTGCGCTGATCGATCCGACTTTGGTTTTGAAGAAAGAACATGTATTTGGGAAGAAAGGGTTCAGTACGAGCTCGAAATTTCACGAAAATGGAGAAAATCATGAAATCTCCGTGATTATTAAACACTCGCCCAATGGAATCGAGCCGGAAATGGAGATTAGAATCGACGGGCAGTTGGCAATTCACGTGAAGCATCTGCAATGGAAGTTTAGAGGCAACGAGAGAGTCGATGTCCACAAATTAAGATTAGAAATTTATTGGGATGTTCACGATTGGCTATTCTCCCCTGGTCCTAGGCCAGCATTATTCATTTTCAAGCCGAATCTCTGTCCGTCGCAATCGTCCTCCATCGGAACGGCGAGTTCTGAAAGTACGGTGGGTCTAAACAGCAGTGGGGCATCTGAATTTTGCCTCTTTGTCTACGCTTGGAAGGATGAAAGGGAAGAATACATTCGCCCGGAGATTCCATCGCCATCACCATGA 930 48.39 MHEHIGIPACFSSGDKQSDHPAVVTRLSHRVVSSVYRTKVADQCRLITITWSKNLLLDGLSVSVEGPEGETQFTCKIEPKPWQFWRKQGWKRFVVDCKAVDVFWDLRTAKFDGEVEPISEFYVAVVSDEEVVLLLGDRKKDAYRRTGCRPALIDPTLVLKKEHVFGKKGFSTSSKFHENGENHEISVIIKHSPNGIEPEMEIRIDGQLAIHVKHLQWKFRGNERVDVHKLRLEIYWDVHDWLFSPGPRPALFIFKPNLCPSQSSSIGTASSESTVGLNSSGASEFCLFVYAWKDEREEYIRPEIPSPSP 309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 17297171 17298100 + Bpe001589.1 Bpe15g00656 116335

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00656 309 PANTHER EXPRESSED PROTEIN 1 293 IPR008586 -
Bpe15g00656 309 PANTHER OS01G0909400 PROTEIN 1 293 - -
Bpe15g00656 309 Pfam Plant protein of unknown function (DUF868) 30 293 IPR008586 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00656 - - - rcu:8278274 419.853
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00669 Bpe-Chr7:13374675 Bpe15g00656 Bpe-Chr15:17297171 3.44E-72 dispersed
Bpe12g00167 Bpe-Chr12:1265196 Bpe15g00656 Bpe-Chr15:17297171 2.23E-85 dispersed
Bpe13g01488 Bpe-Chr13:20257365 Bpe15g00656 Bpe-Chr15:17297171 2.29E-122 dispersed
Bpe13g00234 Bpe-Chr13:10353691 Bpe15g00656 Bpe-Chr15:17297171 6.88E-171 wgd
Bpe13g00511 Bpe-Chr13:12472693 Bpe15g00656 Bpe-Chr15:17297171 2.78E-125 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g837 Blo04g00715 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone2ag0934 Cone16ag0069 . . . . . . . . Bda11g01647 Bda14g00793 . Bpe15g00656 . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001841 6 1 3 2 4 2 2 2 2 2 1 2 2 1 2 3 2 5 2 2 2 2 2 2 1 2 1 2 3 3 68
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe15g00656 Bpe_Chr15 FPKM 7.177971 7.239043 6.185015 6.232664 0.577403 0.523121 0.393498 0.0 0.0 0.0