Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00661 ATGGGAGTCAAGCTATCCCTCTTTTTCTCTCTCCTCCTCGTCTCTCTCCTTACTCCCCTCGTCTTCTCCTCCCCAGTTAAGGACCCAGAGCTCGTAGTACAGCAAGTACACAGAAGCATCAATGCCTCCAGGAGGAGCCTTGGCTACCTCTCCTGCGGCACCGGAAACCCTATCGACGACTGCTGGCGGTGCGACCTCAACTGGGAGAAGAATCGACAGCGCCTAGCCGATTGCGCAATCGGGTTCGGCAAAAACGCTGTCGGAGGCCGCGATGGTAGGATCTACGTAGTTACTGACGATGGCGACGATGATCCAGTGAATCCGAAACCCGGTACACTCCGATACGCAGTGATTCAAGACGAACCGCTCTGGATAATTTTCGCCGGGGACATGGGGATAAAACTGAAAGAAGAACTGATAATGAATTCTTTCAAAACCATAGACGGGAGAGGGGCCGACGTCCATATTTCTGGGGGGTCTTGCATTACGATACAGTACGTGACAAATATTATAATCCACGGTCTCCATATCCACGACTGTAAGCAAGCGGGGAATGCTTACGTGCGGGACTCCCCACATCACTATGGGTGGAGAACTGAATCGGACGGAGATGGGGTTTCAATCTTCGGGGGTAGCCATGTTTGGGTCGATCATTGCTCTTTGTCGAACTGTAACGACGGCCTGATCGATGCGATTCATGGGTCTACGGCTATTACGATTTCAAATAATTATATGACACATCATAATAAGGTAATGTTGCTAGGTCACAGCGATTCAAACAGTCAAGACAAGAACATGCAGGTCACCATTGCCTTTAATCACTTTGGAGAAGGCCTGATACAAAGAATGCCCAGGTGTAGGCATGGGTATTTTCACGTGGTCAACAACGACTACACCCATTGGGAAATGTATGCCATTGGAGGGAGCGCAGCCCCTACGATCAATAGCCAAGGCAACCGATTTGTTGCCCCAGACGACAGATTCAGCAAAGAGGTGACGAAGCGTGAGGATGCACCGGAGAGCGAATGGAAGGGATGGCATTGGAGGTCAGAGGGAGACTTGATGTTGAACGGTGCGTTTTTCACGGCATCTGGGGCTGGAGCTTCTTCAAGCTATGCTAAAGCTTCGAGCTTGGGTGCTAGGCCATCTACCCTAGTTGGTTCCATTACAGTTGGCGCTGGTGCACTCGATTGCAAGAAGGGCTCGCGCTGCTGA 1215 51.03 MGVKLSLFFSLLLVSLLTPLVFSSPVKDPELVVQQVHRSINASRRSLGYLSCGTGNPIDDCWRCDLNWEKNRQRLADCAIGFGKNAVGGRDGRIYVVTDDGDDDPVNPKPGTLRYAVIQDEPLWIIFAGDMGIKLKEELIMNSFKTIDGRGADVHISGGSCITIQYVTNIIIHGLHIHDCKQAGNAYVRDSPHHYGWRTESDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDSNSQDKNMQVTIAFNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFVAPDDRFSKEVTKREDAPESEWKGWHWRSEGDLMLNGAFFTASGAGASSSYAKASSLGARPSTLVGSITVGAGALDCKKGSRC 404
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 17324303 17325815 - Bpe001594.1 Bpe15g00661 116340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00661 404 SUPERFAMILY Pectin lyase-like 41 396 IPR011050 -
Bpe15g00661 404 PANTHER PECTATE LYASE 18-RELATED 11 401 IPR045032 GO:0030570
Bpe15g00661 404 PRINTS Pollen allergen Amb family signature 202 223 IPR018082 -
Bpe15g00661 404 PRINTS Pollen allergen Amb family signature 78 95 IPR018082 -
Bpe15g00661 404 PRINTS Pollen allergen Amb family signature 138 154 IPR018082 -
Bpe15g00661 404 PRINTS Pollen allergen Amb family signature 282 301 IPR018082 -
Bpe15g00661 404 PRINTS Pollen allergen Amb family signature 375 398 IPR018082 -
Bpe15g00661 404 PRINTS Pollen allergen Amb family signature 304 323 IPR018082 -
Bpe15g00661 404 PRINTS Pollen allergen Amb family signature 102 127 IPR018082 -
Bpe15g00661 404 PRINTS Pollen allergen Amb family signature 346 370 IPR018082 -
Bpe15g00661 404 Pfam Pectate lyase 135 321 IPR002022 -
Bpe15g00661 404 Gene3D - 55 397 IPR012334 -
Bpe15g00661 404 PANTHER PECTATE LYASE 11 401 - -
Bpe15g00661 404 SMART amb_all 130 327 IPR002022 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00340 Bpe-Chr1:2143751 Bpe15g00661 Bpe-Chr15:17324303 2.72E-169 dispersed
Bpe09g00529 Bpe-Chr9:14060114 Bpe15g00661 Bpe-Chr15:17324303 0 dispersed
Bpe13g00464 Bpe-Chr13:12165144 Bpe15g00661 Bpe-Chr15:17324303 3.90E-163 dispersed
Bpe14g01295 Bpe-Chr14:9892444 Bpe15g00661 Bpe-Chr15:17324303 0 dispersed
Bpe15g00661 Bpe-Chr15:17324303 Bpe15g01045 Bpe-Chr15:19798888 0 dispersed
Bpe15g00661 Bpe-Chr15:17324303 Bpe08g00306 Bpe-Chr8:1832348 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00661 K01728 - pop:7453817 707.597