Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00672 TTTATGAAGATTAAAGTAAACGCAGCAAACCCAGGTCTTACTGGGCAGGAAGAGCTCGTTTTAGAAAATGGACTTGGCTCGCCGTCCTCCGGCGATGAGTCGAAGCTAGCCGGAGAACCATCGTCCAAAAAAAGTAGGAGGGATGTGCAAAGGAGGGTGGTATCAGTGCCGATCGGCGACGTGGAAGGATCTAAGAGCAAAGGGGAGACATATCCCCCGCCCGATTCGTGGGCCTGGAGGAAGTACGGCCAAAAGCCCATCAAAGGGTCGCCATATCCAAGGGGATACTACCGATGTAGTAGCTCCAAGGGCTGCCCAGCAAGAAAACAAGTGGAGAGAAGCCGTGTAGACCCCACCACTCTCGTCATCACCTACTCCTGCGACCACAACCACCCCGTCCCCACCACCAAATCCCACCACACCACCTCAGCGGCACCACCGCCAGCGCCACCCGCGGCCACCTCTTCTTCCGGCGACTCTGCCGCGTCCCCTTCTACGTCGGCTGCCGTGCCCCTTTCATTCGCCGGCCCCTCCGCCCTCGAGCTCAGCGAGGATTCCATGCTGGCGAATAATTCCGGGATCTTTGGATGGATTGATGACGTCGCCTATGATAGCGTCCTGGAGAGCCCAAATTTCGACGGAAGCGGGAGTTCCGACGTGGCCATGGTTTTGTCTATGAGGGAGGAAGACGAGTCCTTGTTTGCGGATCTCGGGGAATTGCCCGAGTGTTCGCTGGTTTTCCGGGGAAGATTGCTCGAACCGAATGAGACGAATCGGCGCTGTGATTGTAGTTTCGGACCAGTTACCTGTTGCGCCGGTACGGGATAG 828 57.0 FMKIKVNAANPGLTGQEELVLENGLGSPSSGDESKLAGEPSSKKSRRDVQRRVVSVPIGDVEGSKSKGETYPPPDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTTLVITYSCDHNHPVPTTKSHHTTSAAPPPAPPAATSSSGDSAASPSTSAAVPLSFAGPSALELSEDSMLANNSGIFGWIDDVAYDSVLESPNFDGSGSSDVAMVLSMREEDESLFADLGELPECSLVFRGRLLEPNETNRRCDCSFGPVTCCAGTG 275
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 17387760 17389159 + Bpe001605.1 Bpe15g00672 116351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00672 275 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 28 249 IPR044810 GO:0003700
Bpe15g00672 275 SUPERFAMILY WRKY DNA-binding domain 69 134 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe15g00672 275 MobiDBLite consensus disorder prediction 1 84 - -
Bpe15g00672 275 MobiDBLite consensus disorder prediction 128 143 - -
Bpe15g00672 275 PANTHER OS01G0750100 PROTEIN 28 249 - -
Bpe15g00672 275 SMART WRKY_cls 73 133 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe15g00672 275 MobiDBLite consensus disorder prediction 37 53 - -
Bpe15g00672 275 ProSiteProfiles WRKY domain profile. 75 134 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe15g00672 275 MobiDBLite consensus disorder prediction 154 168 - -
Bpe15g00672 275 Pfam WRKY DNA -binding domain 75 132 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe15g00672 275 Gene3D WRKY domain 60 135 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe15g00672 275 MobiDBLite consensus disorder prediction 128 168 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01076 Bpe-Chr2:13674350 Bpe15g00672 Bpe-Chr15:17387760 1.14E-63 dispersed
Bpe13g00960 Bpe-Chr13:15480354 Bpe15g00672 Bpe-Chr15:17387760 1.42E-31 dispersed
Bpe14g00971 Bpe-Chr14:7174468 Bpe15g00672 Bpe-Chr15:17387760 2.67E-29 dispersed
Bpe15g00672 Bpe-Chr15:17387760 Bpe02g01046 Bpe-Chr2:11410084 1.51E-36 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22605 PF03106 WRKY 2.90E-24 CL0274 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00672 - - qsu:111995855 273.092