Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bpe15g00676 | ATGACAGCCAGAGAAATGCTCCACAAAATGAAGGTGAAGGCGGGTTTTGGTTCATCTACCATGGAAACGGGGAAACGCATAGGCAAGTTGTCAAAGAATGTTACCCATGGTTATGATTTGGTGAAGGGTAAATCGAACCATGCTATGGAAGATTATTTAGTTTCAGATTTCAAGCAATTTGAGGATTATGAATTAGGTTTATTCGCCATTTTCGACGGTCATTTGGGTCATAACGTTGCAAATTACTTGCAGCACAACCTGTTTGATAATATTCTGAAAGAGCCTGATTTCCGGACGAACACCGAATACGCAATAAAGAAAGCTTACCGGAGAACAGATGAAGAAATATTGAATCAGGACTTTCAATTAGGAAAAGGAGGTTCAACTGCTGTGACTGCAATTCTGATCAACGGCAAGAAACTGGTAGTAGCAAACGTGGGAGATTCTAGGGCGGTTCTGTCCAAGAATGGCGTAGCCAATCAGCTATCGGTCGACCACGAGCCAAGAACGGAGAGGAAGTTAATCGAAAGCCGTGGTGGGTTTGTGTCAAATATTCCAGGGGATGTTCCCCGCGTCGACGGGCAACTTGCAGTGGCGAGGGCGTTTGGGGATAAAAGCCTGAAGATTCACCTGAGTTCAGAGCCTGACATAGCGGTAGAAACGGTGGATCAAAGTACAGAGTTCCTCATCTTGGCAAGTGATGGGATATGGAAGGTGATGTCAAACCAGGAAGCAGTGGACGCCATTAAAGACATCCAGGATGCTCAGACGGCGGCCAGGCGCTTGACGGAGCTGGCCGTTTCAAGGAGAAGTAAGGATGACATATCTGCCGTAGTTGTACGGTTTCGATAG | 852 | 46.24 | MTAREMLHKMKVKAGFGSSTMETGKRIGKLSKNVTHGYDLVKGKSNHAMEDYLVSDFKQFEDYELGLFAIFDGHLGHNVANYLQHNLFDNILKEPDFRTNTEYAIKKAYRRTDEEILNQDFQLGKGGSTAVTAILINGKKLVVANVGDSRAVLSKNGVANQLSVDHEPRTERKLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSSEPDIAVETVDQSTEFLILASDGIWKVMSNQEAVDAIKDIQDAQTAARRLTELAVSRRSKDDISAVVVRFR | 283 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 15 | 17425668 | 17427015 | - | Bpe001610.1 | Bpe15g00676 | 116355 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bpe15g00676 | 283 | CDD | PP2Cc | 36 | 282 | IPR001932 | - | |
| Bpe15g00676 | 283 | SMART | PP2C_4 | 25 | 280 | IPR001932 | - | |
| Bpe15g00676 | 283 | SMART | PP2C_SIG_2 | 44 | 282 | IPR001932 | - | |
| Bpe15g00676 | 283 | Pfam | Protein phosphatase 2C | 49 | 275 | IPR001932 | - | |
| Bpe15g00676 | 283 | SUPERFAMILY | PP2C-like | 30 | 282 | IPR036457 | - | |
| Bpe15g00676 | 283 | ProSiteProfiles | PPM-type phosphatase domain profile. | 35 | 282 | IPR001932 | - | |
| Bpe15g00676 | 283 | PANTHER | PROTEIN PHOSPHATASE 2C 39-RELATED | 1 | 282 | - | - | |
| Bpe15g00676 | 283 | PANTHER | PROTEIN PHOSPHATASE 2C | 1 | 282 | IPR015655 | GO:0004722|GO:0006470 | |
| Bpe15g00676 | 283 | Gene3D | - | 31 | 283 | IPR036457 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bpe03g00375 | Bpe-Chr3:10503755 | Bpe15g00676 | Bpe-Chr15:17425668 | 3.94E-10 | dispersed | |
| Bpe05g00762 | Bpe-Chr5:20980903 | Bpe15g00676 | Bpe-Chr15:17425668 | 1.05E-40 | dispersed | |
| Bpe08g00594 | Bpe-Chr8:4303300 | Bpe15g00676 | Bpe-Chr15:17425668 | 5.80E-112 | dispersed | |
| Bpe08g01007 | Bpe-Chr8:12392406 | Bpe15g00676 | Bpe-Chr15:17425668 | 1.10E-116 | dispersed | |
| Bpe15g00676 | Bpe-Chr15:17425668 | Bpe11g00460 | Bpe-Chr11:3574637 | 4.12E-118 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bpe15g00676 | K17506 | - | cit:102608973 | 430.254 |