Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00712 ATGTTGGAGGGACAGCTCCACCCGCTAGACATGACCAACAACACTTCCGATAGTGATCTTCTCCGACTCCGAGGAGATGACGATTTCGACAGCGCCACCAAATCAAGCAGCGAAAACCTTGAGTTTTTCTCTGGCGACGACCAAGACCCACGACCTAAAAAGAAGCGATACCATCGCCACACCCAGCTTCAGATCCAACAAATGGAAGCTTTCTTCAAGGAATGCCCACATCCAGATGATAAGCAAAGGAAGGAGTTGAGCCGGGAACTAAACCTGGAGCCATTGCAAGTCAAATTTTGGTTCCAAAACAAACGTACTCAAATGAAGATTTCTACATATTTCCTTGTGAATTTCTATGAAAGGATTAGTAAGAGAATAATCAAGAACACTCTAACCCAACACGAGCGCCATGAAAACACACATCTCCGGACCGAAAATGACAAGCTTCGAGCAGATAACATGAGGTATCGAGAAGCTCTGAGTAACGCTTCATGTCCCAACTGTGGAGGCCCAACCGCCCTTGGAGAGATGTCCTTCGACGAACATCATCTCAGACTTGAAAACTCCAGATTACGAGAAGAGATCGATCGCATGTCAGCAATAGCAGCCAAATATGTTGGCAAACCAGTGATGAGCTTCCCACTTTTATCTCCACCTGTTCCATCACGTCCGCTTGAACTAGACATGGGAAACTTCGGAGGTCAGCCAGTGATCGGCGCTGACATGTATGTTGCTGGAGACATGCTCCGTTCTATGGGTGCTCCGACAGAGGCTGAAAAACCCATAATAATCGAGCTTGCGGTGGCGGCTATGGAAGAACTGATCAGAATGGCTCAGATGGGAGAGCCCTTATGGATTTCTAGCCTTGATGGATCGACCGTTATGCTTAATGAAGAGGAATACATGAGAACATTTGGCAGAGGAATTGGACCAAAACCCGCTGGATTTAAATGCGAAGCCTCTAGAGAAACTGTTCTCGTCATTATGAACCATGTTAACCTCGTTGAGATACTTATGGACGTGAATCAATGGTCAACCGTGTTTTCTGGTATTGTCTCGAGAGCTTCGACGCTGGAGGTTTTGTCAACGGGAGTTGCAGGAAACTACAACGGAGCACTACAAATGATGACATCAGAATTTCAAGTTCCTTCGCCACTTGTTCCAACCCGAGAAAGTTATTACGTAAGGTATTGTAAACAGCATGGAGATGGAACGTGGGTAGTAGTGGATGTTTCTATAGATCATTTACGACCGAATCTTCCATTGCGATGCCGAAAAAGGGCTTCTGGTTGCTTGATTCAAGAAATGCCGAATGGATATTCAAAGGTTACTTGGGTTGAGCACGTCGAGGTGGATGATAGAGGCGTTCATAGTCTGTACAAACAACTTGTTAATTCCGGCCATGCTTTCGGGGCGAAACGTTGGGTCGCCACCTTAGATCGACAGTGCGAAAGACTCGCCAGCGCAATGGCAACGGGCATTCCCAACGGGGATGCTGGCGGTAAGTCATACAATTTCAGGACTCGTTTCGAAAATTTTGATTGCTGGTTAGTGATAACAAATCAAGAAGGGCGAAAGAGCATGCTAAAGCTAGCCGAGAGGATGGTGATAAGCTTCTGTGCTGGAGTGAGCGCCTCCACGGCTCATACGTGGACGACATTGTCCGGGACGGGGGCCGATGATGTTAGGGTTATGACTCGTAAAAGCGTAAACGATCCCGGTAGGCCTCCTGGCATCGTGCTAAGTGCGGCTACTTCTTTCTGGCTTCCTGTACCTCCAAAAAGAGTGTTCAATTTTCTCCGGGACGAGAACTCAAGAACCGAGTGGGACATTCTTTCAAATGGAGGAGTCGTTCAAGAGATGGCACATATCGCTAACGGACGCGACACCGGCAATTGCGTGTCGTTGCTTCGAGTAAATAGCGCAAATTCAAGCCAGAGCAACATGCTGATATTACAAGAAAGTTCAACAGACCCAACAGGCTCATTTGTGATATACGCTCCCGTTGATATAGTTGCGATGAACGTGGTACTTAATGGTGGAGACCCAGATTATGTGGCCCTTCTTCCTTCGGGATTTGCTATTCTTCCTGATGGAACAGGATCAAACGGTGGAAATGTAACAGACGGCGGGGCCGGTGGGTCACTCTTAAGCGTTGCCTTTCAAATTTTGGTTGATTCTGTCCCTACCGCAAAACTCGCCCTTGGGTCAGTCACCACGGTCAACAATCTCATTGCTTGCACTGTTGAGAGGATCAAGACCGCTTTGTCGACCGAGAATGCTTGA 2286 47.46 MLEGQLHPLDMTNNTSDSDLLRLRGDDDFDSATKSSSENLEFFSGDDQDPRPKKKRYHRHTQLQIQQMEAFFKECPHPDDKQRKELSRELNLEPLQVKFWFQNKRTQMKISTYFLVNFYERISKRIIKNTLTQHERHENTHLRTENDKLRADNMRYREALSNASCPNCGGPTALGEMSFDEHHLRLENSRLREEIDRMSAIAAKYVGKPVMSFPLLSPPVPSRPLELDMGNFGGQPVIGADMYVAGDMLRSMGAPTEAEKPIIIELAVAAMEELIRMAQMGEPLWISSLDGSTVMLNEEEYMRTFGRGIGPKPAGFKCEASRETVLVIMNHVNLVEILMDVNQWSTVFSGIVSRASTLEVLSTGVAGNYNGALQMMTSEFQVPSPLVPTRESYYVRYCKQHGDGTWVVVDVSIDHLRPNLPLRCRKRASGCLIQEMPNGYSKVTWVEHVEVDDRGVHSLYKQLVNSGHAFGAKRWVATLDRQCERLASAMATGIPNGDAGGKSYNFRTRFENFDCWLVITNQEGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVNDPGRPPGIVLSAATSFWLPVPPKRVFNFLRDENSRTEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESSTDPTGSFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTGSNGGNVTDGGAGGSLLSVAFQILVDSVPTAKLALGSVTTVNNLIACTVERIKTALSTENA 761
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 17670077 17673733 - Bpe001645.2 Bpe15g00712 116391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00712 761 SUPERFAMILY Bet v1-like 521 753 - -
Bpe15g00712 761 Gene3D - 44 113 - -
Bpe15g00712 761 SUPERFAMILY Homeodomain-like 39 109 IPR009057 -
Bpe15g00712 761 Pfam Homeodomain 54 109 IPR001356 GO:0003677
Bpe15g00712 761 Gene3D - 314 484 IPR023393 -
Bpe15g00712 761 ProSiteProfiles 'Homeobox' domain profile. 51 111 IPR001356 GO:0003677
Bpe15g00712 761 CDD START_ArGLABRA2_like 260 484 - -
Bpe15g00712 761 CDD homeodomain 54 111 IPR001356 GO:0003677
Bpe15g00712 761 MobiDBLite consensus disorder prediction 1 60 - -
Bpe15g00712 761 MobiDBLite consensus disorder prediction 20 34 - -
Bpe15g00712 761 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 10 758 - -
Bpe15g00712 761 ProSiteProfiles START domain profile. 256 488 IPR002913 GO:0008289
Bpe15g00712 761 SUPERFAMILY Bet v1-like 256 487 - -
Bpe15g00712 761 Pfam START domain 266 485 IPR002913 GO:0008289
Bpe15g00712 761 ProSitePatterns 'Homeobox' domain signature. 86 109 IPR017970 GO:0000981|GO:0006355
Bpe15g00712 761 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 10 758 IPR042160 -
Bpe15g00712 761 SMART HOX_1 52 115 IPR001356 GO:0003677
Bpe15g00712 761 SMART START_1 265 485 IPR002913 GO:0008289
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00001 Bpe-Chr8:7286 Bpe15g00712 Bpe-Chr15:17670077 0 dispersed
Bpe14g00999 Bpe-Chr14:7375836 Bpe15g00712 Bpe-Chr15:17670077 0 dispersed
Bpe12g00225 Bpe-Chr12:1885649 Bpe15g00712 Bpe-Chr15:17670077 0 wgd
Bpe14g00705 Bpe-Chr14:5506370 Bpe15g00712 Bpe-Chr15:17670077 0 wgd
Bpe15g00712 Bpe-Chr15:17670077 Bpe07g00606 Bpe-Chr7:12804133 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22607 PF01852 START 3.30E-59 CL0209 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00712 K09338 - pvy:116137135 1223.76